Array 1 150753-154691 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOQN010000006.1 Acinetobacter baumannii strain BA20352 6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 150753 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 150813 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 150873 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 150933 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 150993 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 151053 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 151113 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 151173 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 151233 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [151285] 151285 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 151345 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 151405 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 151465 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 151525 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 151585 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 151645 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 151705 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 151765 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 151825 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 151885 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 151945 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 152005 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 152065 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 152125 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 152185 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 152245 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 152305 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 152365 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 152425 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 152485 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 152545 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 152605 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 152665 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 152725 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 152785 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 152845 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 152905 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 152965 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 153025 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 153085 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 153145 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 153205 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 153265 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 153325 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 153385 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 153445 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 153505 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 153564 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 153624 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 153684 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 153744 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 153804 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 153864 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 153924 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 153984 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 154044 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 154104 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 154164 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 154224 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 154303 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [154327] 154363 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 154423 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 154483 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 154543 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 154603 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 154663 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTA # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-77] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //