Array 1 3917-3169 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDQB01000043.1 Vibrio anguillarum strain 4070 E contig_43, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3916 28 100.0 32 ............................ GGTGATCGAACTGTTGACGGTTGTTTCATCCA 3856 28 100.0 32 ............................ TTAATTGTGCAAACCCTTCGCTGACGTTGACT 3796 28 100.0 32 ............................ ATTGGCATTAATTCCGGCGAGTTTTGCTACAT 3736 28 100.0 32 ............................ CATTACGGCCGCTATGATGGTGGATAAGTCAA 3676 28 100.0 32 ............................ TGCGGAGATTCGTGATCAGCTGTTGAGCTTGG 3616 28 100.0 32 ............................ ATTATCGATCTCATACGTACCTGCGCCACCAT 3556 28 100.0 32 ............................ ATGTTAACATTCTCGCGCAGATATTGACGCTC 3496 28 100.0 32 ............................ ATCAGCTCGTGACCATATAGTGAACGCTCGAC 3436 28 100.0 32 ............................ TCTATGATTTAACAATTGATACGGAGGATTCG 3376 28 100.0 32 ............................ GATAAGGAATACCGTGCCTCTTGGGTACTTTG 3316 28 100.0 32 ............................ GATGATGCAGTGTTAAGTTCAACCGGAGAATT 3256 28 100.0 32 ............................ TTGCTCGATGGCGTCTTGCACTATCTGTTTCA 3196 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 13 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CTATCTTGTTCTTTTTATACTTCTATATTCAGTGGAGTTCTTGGCTTAATTATGGGCTTAGTTCAAACATTTTCTAATTCAAATGGAGATGCTACAGCCATTCATGTAGGTATCAGTGTCGCTCTTTTGCCACTATTCTATGGTGTATCTATAGGTTTATTTTTACTGCCATTTCATATTGTTGGTAGAAAATAGACTTTCAAAGCATGAGCAAAGTTGCATATATGCAGTTAACAAACGCTTCAAGAGGGACAGCCAACGCGTAGCATTTTTATTATGCGTTGGTTTTCGTGATTACGGTGTTATGCGGAAGCTTAGTAGTAGTGTTGTCTGCCCCTTAAGCGGGCGTTAACTGGCCGTGGCCAATTTGACCCTATTTTTTCGTAAACTTATAACCCATTGATTTTTAAATGTAAAAAGTAAGGCGAAAAATAAAGGGTATTTTCAGAAATTTGAGCTAATTCCTTTTATTCATAATAAGTTACCGTTAATATCGCATA # Right flank : TATAGTTAGCTCAAAAATGCCAGTTAACAAACGCTTTAAGACGGATTCGCAACGCTCGGCGGTTTTGGTTTGATTTGGGTTTTGTGTTTACGGTGCAATAATTGAGTGTTGTGGTAGCGTTGCTCACCACTTAAGCGGGCGTTATGTTTTTAATCAGGTTCAGAGAATCATGGAAGAAAAGAGTCAGTTATTTTTACAGCAGTACCTTCGAACTTTACCTAGTGAAGTGTCTGATAAATATACATCATTTAGTTCGGATTACTTTTGCGCAGATGAATATAACGCAAATCTATGTGCTGATTTAATTCTACGTGGCGAGAAGCGTGCATCATGCAGCATGGAATACTGGTATAGCCACGAAAGTGAAGTATTACCTATAGTTGGCCACCTTCAAGTGGTCACAAACTGGGATGGTGAACCAATTTGTATAATTGAGATAACATCTGTTTCAAGTTGTCGATTCAACGAAGTGACGGAAGAGTTTGCGGCAAGTGAGGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //