Array 1 89348-85696 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSWA01000003.1 Ligilactobacillus salivarius strain E6_1 Scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 89347 36 100.0 30 .................................... TAATGGAAACTATGCCTATTGCTTTACGTA 89281 36 100.0 30 .................................... GAGTTAATGGGCCTGTGAGTGACACTACAA 89215 36 100.0 30 .................................... ACTTTACGTCAACTACAAGCAAAGCTATGC 89149 36 100.0 30 .................................... GAGTTAATGGGCCTGTGAGTGACACTACAA 89083 36 100.0 30 .................................... ACTTTACGTCAACTACAAGCAAAGCTATGC 89017 36 100.0 30 .................................... ACGCTATTTATCCTCCTTAATTTTAACGGT 88951 36 100.0 30 .................................... ACGCTATTTATCCTCCTTAATTTTAACGGC 88885 36 94.4 30 ........................G.....G..... TCCGGGTAGTGAGATACATGCTATTCATGA 88819 36 100.0 30 .................................... GCATGTCGGCGGTACTGTTTGCTTTGTTTT 88753 36 100.0 30 .................................... TCCTGTTGTTTATCTGCTATCTTTCGTAGT 88687 36 100.0 30 .................................... AGATGGTAAGTTCACAGTAACAGTCGATGA 88621 36 100.0 30 .................................... AGATGGTAAGTTCACAGTAACAGTCGATGA 88555 36 100.0 30 .................................... TTTGAAGCTACTGGTCAATTCTTTCGCAGA 88489 36 100.0 30 .................................... CGAAACAGGCTTAATTGCTTTAGTGCGTGA 88423 36 100.0 30 .................................... TCGTGTTAAACATAAGGATGAAGCCCCAGA 88357 36 100.0 30 .................................... TCCTGTTGTTTATCTGCTATCTTTCGTAGT 88291 36 100.0 30 .................................... CGTTGAATTTGCATTTTTGCTCATACTGTT 88225 36 100.0 30 .................................... TCGCCAACTCGCCATATCAACTTTGCCTGT 88159 36 100.0 30 .................................... TCCGGGTAGTGAGATACATGCTATTCATGG 88093 36 100.0 30 .................................... TGTAATGTTCAAATATAAACATGCAGGTCT 88027 36 100.0 30 .................................... AACTGTTAAATACTGGCGTGGTTGTTTGAA 87961 36 100.0 30 .................................... TTTCAGCTGCTACACCTGTTTGGAATAGTT 87895 36 100.0 30 .................................... GACTTTAGCAGCACCAGCTGCAAGTGAACC 87829 36 100.0 30 .................................... AATCAGTCAATCCTAGTGACTTGTCGCCAA 87763 36 100.0 30 .................................... TATAACAAAGCTAAATTTGATCGTACCAAG 87697 36 100.0 30 .................................... AGCATATGTTTTCCCGCTTCCTTGCCAATA 87631 36 100.0 30 .................................... ATATCTTTTTTTTGACGATGATATAACAGA 87565 36 100.0 30 .................................... TTACTCTAGAAAAGAGTAAATTCAAAGCAG 87499 36 100.0 30 .................................... TCGTGTTAAACATAAGGATGAAGTTCCAGA 87433 36 100.0 30 .................................... AAATAAAGATTGGCTTGGACCTTTGGCGGC 87367 36 100.0 30 .................................... ACGTCATCCCAATAATCAGCACCTTCATTA 87301 36 100.0 30 .................................... ACCACACCAAAACAAGTTCGAGTGTCTCGA 87235 36 100.0 30 .................................... AAGAAAGACAGCTAAGTAATCATGAACTAG 87169 36 100.0 30 .................................... TGGCAAACTATCCCACGTTTTAGTTTTGAA 87103 36 100.0 30 .................................... AGAATTCCGTAGTTAAAAACTTGGCTAATA 87037 36 100.0 30 .................................... TAATAAATACTTAATCAGTAGAAAAGGAGC 86971 36 100.0 30 .................................... AAATAAAAACAAAAATCCACCCGGCGATGA 86905 36 97.2 30 ...G................................ AAATAAAAACAAAAATCCACCCGGCGATGA 86839 36 100.0 30 .................................... ACAGAAGTTTTACATTGTGAAGCCCAAGCA 86773 36 100.0 30 .................................... TGATGCTCTCGATTTTAAAGGTAACTATGA 86707 36 100.0 30 .................................... ACAGAAGTTTTACATTGTGAAGCCCAAGCC 86641 36 100.0 30 .................................... AAACGAGTGAGGATATATAATGAGTTATAT 86575 36 100.0 30 .................................... AAACGAGTGAGGATATATAATGAGTTATAT 86509 36 97.2 30 A................................... AGATGTTTTAACGTTTATCAACTACAACAG 86443 36 100.0 30 .................................... AAACTGTTTTATTAACGCATTAATGAAGAA 86377 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 86311 36 100.0 30 .................................... CGATAAGATTGCAGAAATTACTAACTTGAT 86245 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 86179 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 86113 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 86047 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 85981 36 86.1 29 ..........T.........T...A......G.C.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC T [85947] 85915 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 85797 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 85731 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 55 36 98.8 31 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : TAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAACT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [23-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //