Array 1 761923-761040 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNBR01000010.1 Variovorax sp. B2 CHC06_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 761922 29 100.0 32 ............................. CGCAGCGTCAGGCTTTGGCGTGCTGCGTGCGC 761861 29 100.0 32 ............................. TCTTGTGGGGCGCTGACGGCCGCTGCAACGTC 761800 29 100.0 32 ............................. TAAATCCGTTCGCACCAAGGTGAGCCGCACGC 761739 29 100.0 32 ............................. CCGTGCTGGGGCGCGCGTACCGCGCAGCTGCT 761678 29 100.0 32 ............................. CAGTCTTTGCTTCCATCTCGAGACGTCGAGTA 761617 29 100.0 32 ............................. CCGGCGTCCACCGCGTTCGACATCGTGCCCCT 761556 29 100.0 32 ............................. CGAGGCTTGTTGCATGCAAAGAAGGGGGCTTC 761495 29 100.0 32 ............................. TCGACCATCGAGAGCATCGCCATCCAGGAGCC 761434 29 100.0 32 ............................. CCGACGAGGAAGCCACCCAGACATCCGTAGAC 761373 29 100.0 32 ............................. CGGCTGGTGATTGGCCTCGAGGACGCCGAGGG 761312 29 100.0 32 ............................. TGCGCTATCACCTGGCAAGCGCGCTGCATTGA 761251 29 100.0 32 ............................. CCCTCTTCGAAGTGGTCGATGCCGGTGGACAC 761190 29 100.0 32 ............................. TGAAATTGGTCGTCCTCGATTTGCTCACGCGT 761129 29 100.0 32 ............................. GTACGGGCTGCGGGCGATGAGCATTTGCTGAG 761068 29 96.6 0 ...........C................. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 99.8 32 GTCTCCCCCGCGCAAGCGGGGATAGCTCG # Left flank : GAGACTCAAGTAAGGCGGCACCTGCGTGACCACTTTAAGCAAACGCGATTTGTTGCGCGGGTCGTGGATGACCTCAAAGGCCTGTTCGAAGAGTCGACCGCATGATGCTCGTCCTCGTCCTGACTGGTGCGCCACCTCGCTTAAGAGGCCGGCTATCAACGATACTGCTTGAGGTGCGGGCTGGCGTCTATACCGGGCACGCGACACAGAAACTGCGTGAAGAACTATGGGCGTTGACTTGCGGCAACATCGAGGATGGCGACGCCCTGATTGTGTGGCCAGACCAAACTGAGGTTTGCGGCGTCTCGTTCCGGACGGTAGGCGTGAATCGGCGCCGGGCGGTCGAAGTCGATGGGCTGCAGCTGGTGGATTTCCCTCGGTTGAGCACAGACGAGGTCCCTGAGTCCATTATGGATTTAGCAGGTCTAGCGGAGGTGGTTTTCCCCGGTGGACAGTGTGACAACTAAAATGTTTCGCTAAATCAACGGGTTAGGGGAAGA # Right flank : CCCTTGATGGCCAAGTTCACGCCAATGAGCACGTCACCCCCGCTTGCGCGGGGATTGGAAGTCTCGGTCGACCGCCAACGGACAGCCCGTGCCAGGCTCTTGTGCTGCGGCGTGGAGCCTGGCCTCAGCTTTTAAGGCTGTAACCTATACTCGAGCGCATTGCGCTATCAGTGTCCTTTGTGATACAATGAGTGACGCTTTAGCATTCGTCGCCTACGTCATCAAGCAAGGCGGCATAATTTCACTATTTCGCTGTGCGCATGAACGTACTCTTAGACCCTTGGGTCCCCCTCCTGCTGCCAGACGGTACTGTGGCCAAGCAGCGCATGGTGGACATCCCTACCTCCGGTGCGCTTCGTGTGGAGCATGCCCGAGCCGACTACTCAGCGCTCATCACTGAGCTGGCGGTGTGCGTTTACCAGACCCTTGCGGCGCCGCACGACAGGATTGCGCGACGAGCTCTGGTGCGGGCCCCCGACCTTGCATTGCTGGACAAGGCG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCGCAAGCGGGGATAGCTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 764077-763226 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNBR01000010.1 Variovorax sp. B2 CHC06_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================== =========================================== ================== 764076 22 95.5 38 A..................... GCCGTAGTTTCGGGTGTCGAACGACGCGTGCGTCTCTC 764016 22 100.0 39 ...................... AGGAGCATCGGACCGATGCCAACCGTCGCCATCGTTTAT 763955 21 86.4 36 .....A...........-..G. ACCGGATACGGAGGCCGCAAGCCGGCTCCCCCCCCA TA [763941] 763896 22 95.5 43 ..A................... GGCCGGTCTCGTTCACTGATATCGCACCGAACGGCTCCCCCCC 763831 22 95.5 39 .......T.............. GGTCTGCGATGCCGTCCTCTTTCGGGGTGACCGGTCTCC 763770 21 90.9 39 .....-.T.............. GGGTTGTCGCATCATCACTTGCGGTGGCGTTGAGACTTC C [763762] 763709 22 95.5 37 ........C............. AGGCTGGAACCGCGAGCGCGAGCAGTATCAGGCGTCT 763650 22 95.5 39 ..................T... GGACTTGAGGGCTGCCATTTGCTTGTCTCCTGCGTCCCC T [763647] 763588 22 90.9 39 T.............C....... GTTCTGTAGGACGTCGTGCACGCCGCCGCCCTCGTCTCC 763527 22 95.5 39 ..................T... GGGAAGCAGCAAGTAGTCGCTCTCATTTGCGTCGTCGGC 763466 22 95.5 40 .......G.............. GCCCCCCCACCAGAACGTCCGGCCGCGCATCAGAGTCTCT 763404 22 86.4 37 .......G.......G...T.. GTGCGATTGCTCGTGCAGTGGCGAGAACCATGGGTCT 763345 22 90.9 37 ...C............C..... GCTCGCCCACAGGAAATGTTCTGGATGGGGCATGTCC 763286 21 86.4 16 ...C............C.-... GAAACGATTGCCGTCG GG [763282] Deletion [763250] 763247 22 68.2 0 TG.T..........A..C..CG | ========== ====== ====== ====== ====================== =========================================== ================== 15 22 91.2 37 CCCGCGCAAGCGGGGATAGCTC # Left flank : ACGAAGAGGCCGAGGCGCCAGCATTTCTGGCGTTTGCGGAAGAGCGGTCAGAAGGGAAGATTGAAGCAGCCAAGCGAGCGGCTAAAAACGTTCGACTGAATCTGACCGTGGGCTACTCCCAGTTGATTGCAGACGTGGCGCCTGAGCAAGCAGTGACCCGGCTGGGGGAGAAGTCGGTCCGGGTAGTGCTTTGCGACCAAGGCGGCGCCCCCTTGTTTGGCAGCATGGAGTTGTCCCGCCTAAGCCTACGAGCAAGCCTACTTGCTCTCGAGGTCGACGACACCGGGCACGCAAAGTTGAGGATGGGCGCAGCCGGCTCGGGTGAGTGGGAGATGTTGGCGGTCGACCATGCGAGCAAGGAGCGATTGGTCCGCTACAGTCGGACCCGTGGGTTTTCGGTGGGCCCACCACAGCGGCGGAGATGAGAGCCGCGGCGCACGTACGTGCGCCAATGAACGGATAAAGCCGGTGGCTAAAAAATGCAGGTGCGAAAGACGTTG # Right flank : GGTCACGTCAAGGCGCCCTCATTCGGCGGGATATTTGCTCTCCGCGTCAGCAGAAGACCTGGTGGTAACGCAGCGCTACACCTGGGTATGAACGCCCCGCTAAAGCCTATCTATCGCCTTCAGAAGGAACGGATACCCTTCATTTTCCTGAGCTACGGCCGCCTTGACGTCAAGGACGGCGCATTTGTACTGGAGGATGCGAATGGAACTCGCGTGCAGATGCCAGTGGCTGCTTTCAATGTCTTGTTTCTTGAGCCCGGGACGAGCGTGACCCACGCTGCCTTCCAGCTCGCGGCCCAGTGTCACACTCTCATTTGCTTCGTTGGCGAGCAAGCGTGCCGTACATACTCTGTCGGGCGCCCTTCCGACGGAAACCCTACCAACCTTAAAGTGCAGGTCTTGGCATATGCCGACGAAGCCCGGAGGCTTCAGGTGGCCCGCAAGATGTTCGAGATTAGGTTCGGCGAGGCGATTCCGGCCCGACGCAGTATTGAGCAACT # Questionable array : NO Score: 4.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:-0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCGCGCAAGCGGGGATAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //