Array 1 748995-752075 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014864.1 Microbulbifer thermotolerans strain DAU221 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 748995 29 100.0 32 ............................. CCGATTCGGAATAAAGGCGCGACCCTGGCAAT 749056 29 100.0 32 ............................. ATACGACCGATCTTGTGCGCGATCATTTCCAG 749117 29 100.0 32 ............................. CATTGTCTGGAATCACCGAGCACACGGTTTAC 749178 29 100.0 32 ............................. CGATCAGCCTAGCGGGGTAACTGTATGTTTAT 749239 29 100.0 32 ............................. CGGGCGGCAATTCGGGAGGCAAAAATAGAGGC 749300 29 100.0 32 ............................. GATATAACCACGCCCGTATAGGGTGTAATAAT 749361 29 100.0 32 ............................. CACCATGGATGCGTGATTGAACAGCGCGAGCT 749422 29 100.0 32 ............................. GCACGATAGTTTGATTGTTATTGATGAGGTCC 749483 29 100.0 32 ............................. GCCGCTTCGCGCGGCCTTTTTTTGTGGCGATT 749544 29 100.0 32 ............................. AGCCAGTAAACGCCTCGCTATCCACAGTACAA 749605 29 100.0 32 ............................. CTCTCACCTCCGAATGCGCTGTATTTGTTACC 749666 29 100.0 32 ............................. TACGGACATGGTCTGGCTGCGTTGCGCTCTAA 749727 29 100.0 32 ............................. GGGCCAAACGATGGCTGAAAACGTTCAATTCA 749788 29 100.0 32 ............................. AATCGGCAGTATCGATTCCAATTTATGCTGAA 749849 29 100.0 32 ............................. TTCGCGTGCACCATTTTTATGTTCCGCTGCGT 749910 29 100.0 32 ............................. TTTCTCACCGAGACCAGCATACCGGATAAATT 749971 29 100.0 32 ............................. AGTGATAAAACTGATTTCTATCAGAGGGAATT 750032 29 100.0 32 ............................. TAATTTCAAAAACCCACGCATCTACGCTATAA 750093 29 100.0 32 ............................. TGCTGGAGATGGTTGAATGGGATTACGAGGTA 750154 29 100.0 32 ............................. TGTCGTCCCACACGCTGCGGGTTATCGGTGTG 750215 29 100.0 32 ............................. GCCGCTAGGCGGCCTCCCCGTGATAACGTTTT 750276 29 100.0 33 ............................. GTTAACGAAATCACTATTACTCGCAGCACAAAG 750338 29 100.0 32 ............................. CTGGGATGCCGCCGCATGTCCGGGGTTTTGGC 750399 29 100.0 32 ............................. TAGCTCTTACTGTATACAACATTTCTACAGAT 750460 29 100.0 32 ............................. GCCGACTGGCTGATTAACCGACTAGCAAACAA 750521 29 100.0 32 ............................. CGGGGCGATATTGACAGCGCGCACGCGGTTTC 750582 29 100.0 32 ............................. AGCCGCTCTCAAGATGTGCGACGACACGAAAG 750643 29 100.0 32 ............................. AAAAACTATCAATCTAAAATCCTCCCTATATC 750704 29 100.0 32 ............................. TTTTTCCCGGCCAGACGGGAACAGGTTTTGGA 750765 29 100.0 32 ............................. ACGCCCAAAACGTGACGGGTTACCTGTAACGG 750826 29 100.0 32 ............................. CCTTCAGCCAACGTCGCGCCGGCTTGAGATAT 750887 29 100.0 32 ............................. ACCGCTGGCGGTTTTAACAAACATCTGCGGCA 750948 29 100.0 32 ............................. CGCCTAGTGGACGAGGGGCGCAGCCTGCGCCA 751009 29 100.0 32 ............................. TATTTTTGCGGTCTGGTAATCGCTGCCAAGCT 751070 29 100.0 32 ............................. TTCGCTTAGCCTTCGCTTAGTTCGCTTGCGAT 751131 29 100.0 32 ............................. CTCCACCCCTCGGAAAAACTGATAATCATCCG 751192 29 100.0 32 ............................. GGGGGGCAATCGATCCCCCCGAGTTTCTAACC 751253 29 100.0 32 ............................. AACTGGCCCAACGGGCGCAGAACTAAGAGGAA 751314 29 100.0 32 ............................. GTGGCTGATGCTAAAGCGGCCGGTCTGCACCC 751375 29 100.0 32 ............................. CATTTGCGCAGAATCCTTGCTATACGCATTAA 751436 29 100.0 32 ............................. AGGCCAAACGATGGCTGAAAACGTTCAATTCA 751497 29 100.0 32 ............................. TCCCCTTGCGTTTGCTTTGGGAGGATTTTGAC 751558 29 100.0 32 ............................. TTTGGCGGCGCCGCGCTCACACTGGTCACCTG 751619 29 100.0 32 ............................. TACACGGTGAAGAAATTGACGTCGCCCGAGTC 751680 29 100.0 32 ............................. GGTCGTATTGGCGATTATTTAGGTATTGGATT 751741 29 100.0 32 ............................. CGGTGGTTCGCACTGTGCGCGAAAAGGCTGAC 751802 29 100.0 33 ............................. TGAGGCACGGATCACAGAATCGAACGCCCGTAC 751864 29 100.0 32 ............................. TTTGTCGTTTGAACTGCGGCGTATCATGGGGC 751925 29 100.0 32 ............................. CGAACTGGGTTCAGATAGTGGCCGGGCAAACG 751986 29 96.6 32 .........A................... AGCGGACTGGGGAAGAGCCAGACGCTGAAGCG 752047 29 96.6 0 ..............C.............. | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.9 32 CTGTTCCCCGCATGTGCGGGGATAAACCG # Left flank : CGCCGGCGGCATCGACCCGCCCGAGCCACCAGAGGACACCCAACCTCCAGCTATCCCGGAACCGGAGCCCCTTGGAGACGCGGGCCACAGGAGTCAGTAATGAGTATGCTGGTGGTGGTAACGGAAAACGTCCCTCCCAGATTGCGTGGTCGGCTTGCGGTCTGGCTGCTGGAGATCCGCGCTGGCGTCTACGTGGGCGATGTCAGTAAGCGGGTGCGGGAAATGATCTGGGAGCAGATTGAAGCCCTGGTGGAAGAGGGCAATGTCGCCATGTGCTGGGCCACCAACACGGAATCCGGTTTTGACTTCCAGACCTGCGGTAAAAACCGGCGTGTACCCATCGACTATGACGGCTTGCGATTAGTGTCTTTTCTTCCGGTTCCAGAGTAATTCCTCTTTGCCATAATGCTCTTTAACAATTTGATTGTCTTTTGCTCAATCTGGTTGGTAGATTTTTAAAGGATGTATTTTTCTTTATAAATCAATCATGTATGTTTAGT # Right flank : GATATTGACTCTTCTCGTTTGTCTAATCGTCGGCTGTTATCCCCAACCCTGCAAATAAATCGGCGAAACCGGAGCTGTGTGCCTGATTCCGGCGCGGCTGCGGGAGATACAGAAACTGGCAAGAATCCCGCAACTTTAGATGGCGACAGAGGCTTTCGGTGGGGTTAGTCTGTAAGGGTTTTGATATTGCGTGCGGATACTCTATCCATGTTACATCCCCTTCGCGCGCTAAATAACACAATACGGAGTCTAAGTATGACGGATAACACCTATACCCCGCCTCGGGTGTGGAAATGGGAACCCGGGAACGGCGGCGCCTTTGCCAGTATCAATCGCCCTGTGGCCGGTCCTACGCACGACAAGTCCCTGCCTGTTGGCAGACATCCATTGCAGCTGTACTCGCTGGCCACGCCCAACGGCGTTAAGGTAACCATTATGCTCGAAGAGTTGCTGGCGCTGGGGCACGAGGGGGCGGAATACGATGCGCACCTGATCCGAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCATGTGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGATTCCCCGCAGGTGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3536270-3535881 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014864.1 Microbulbifer thermotolerans strain DAU221 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 3536269 36 100.0 36 .................................... CGACCGTAAGCCTATCGAGCGCGCCGCTGGTGGTTT 3536197 36 100.0 35 .................................... CGCAGCGGCTTTGATTGCGTCCATCCACTCGGATT 3536126 36 100.0 36 .................................... AGCCAATATGCTAAGGTTTCTTCAAGGGTGTATTTG 3536054 36 100.0 33 .................................... CCATGTCCAGATTAATATCTTCCCGCCGTACCG 3535985 36 100.0 33 .................................... GTCTTTTAAAGTCACTTTGCGACGGCGCTCTTT 3535916 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 6 36 100.0 35 GTTTGAAAGATGCCCTGATTTGAAAGGGATTAAGAC # Left flank : AGAAGCGGAGGATCTGCGGAAAAACTGCGATGCTTGCAGAATCCGGGCGGGGATGAAGCCTTGCCTCCCATGGGAAGGGCGTGAAAAATGAACTGGATCTGGCGCTGCTGTACGACAACCGCCTGCATATTATCGAGTGCAAAACCCGCCACTACAATGCGGAGGAGGAAGACGCGGCCGAAGCCCTCTACAAGCTCGCCACCCTGGTGCGCCAGCTGGGCGGCATCCGCGCCCGCGCCATGCTGGTGAGCCATTACCCGCTGAACAAAGCGGACCGCCGCCGCGCGGAGGTACTCGATATACAAGTGGTAGACGGGCGGAACGTCAGGGATTTCCGCAGCCGGCTGTGTCAGTGGCTGGGTGTTGACACCGTTTAAGGTGGAGAGGGCGGCTAGAGTGCGAAAATTTGTTTAAATTTCATACAACTTTTCTGGGAGAGACCGTCTTGCCAAGCCCCCTTTGTAACTTATTGAAAATAAAGGGAAAATTGATGGGGGTCA # Right flank : GGAATATGAAAATCTTCTTCTAAGCAGGCAGCCTGGTTTGATTAAATAGAGATAAAAATCAGACTACAGGCCGAAGACTGACAGGCCCTTAATCGCCGAATATACCCTCCGGTAGTGGGCCTTTTCCCAAAGTTTCTATCTGTTGCGGAGATTGCAGCCTATATACGCGAATATCGTCCTCGCCTTGATCGATAATTTCCTCCAACCTGCTTAACAGGGTGTTGAGGTCTTGCTCGCTTAGATGCAAGTGAAAGACGGAGTACTGATAGGCGGTGCCTACCGCGCGGCAGGCGCGGAATACCCGGGCGAGGCGTTTGCGGTCGGCGATGTCGTAGCAAATCAGATAGTGGTGGCGCCGCATGGGGATTTTGGCGGTATGGCTTGTTGTCCGAGGGCACACTCTTCCAGCAGGGAGCAGAGTGCTGTGAATGCTTTTTGCAGCCAGTCCTCCACCGGTTGTGCGCAGTGGGCCTGGTAAAAGCGGGCGAGTTGAGCGGTGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAAGATGCCCTGATTTGAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 3 3537536-3537851 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014864.1 Microbulbifer thermotolerans strain DAU221 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 3537536 36 100.0 34 .................................... AGATATTGCGCGCGCAATACTCCAGATCCAACCG 3537606 36 100.0 36 .................................... CTGATCGAAAAGGCCTCTCTCGAATTGCTGCACATA 3537678 36 100.0 34 .................................... GGCGCGGATTCGTGAACATATCCCACTGATTGAA 3537748 36 100.0 32 .................................... GCCAGCGGGAAGTCACTGATGCCGACATTCAG 3537816 36 94.4 0 .C.............................T.... | ========== ====== ====== ====== ==================================== ==================================== ================== 5 36 98.9 34 GTCTTAATCCCTTTCAAATCAGGGCATCTTTCAAAC # Left flank : AGGTGATGGTGCTTTGGGTGGAGAATCGGGAGCGGGAGGTTGTTGAAATCGCGCCATTGGAAAATTCCTTTCGACAATACAACTAACCTGCAAATTCAATTCCGCGCTTACCCTACAATAATACCTCCTTGAGCTAACCGACACTGTTCACGATTTTTATTTTTGGCCTGCCCTACGAGAGTAAGTCGCCTCGCCAGGGTATTCCGCGCCTGCCGCGCGGTAGGCACCGCCTATCAGTACTCCGTCTTTCACTTGCATCTAAGCGAGCAAGATCTCAACACCCTGTTAAGCAGGTTGGAGGAAATTATCGATCAAGGTGCGGACGATATTCGCGTATATAGGCTGCAATCTCCGCAACAGATAGAAACTTTGGGAAAATGCCCACTACCGGAGGGTATATTCGGCGATTAAGAGCCCCCTCAGCCTTCATCCTGTAGTTTGATTTTTATCTCTATTTAATCAAACCAGGCTGCCTGCTTAGAAGAAGATTTTCATATTCC # Right flank : CCAGGAAACATGCGGTTCACCCTTGGCAGTTTCCTTGCTATGCCTCTGCAAGTTCGCCGGTTTCAATCAATGTCCAGGCCGGTGTTGCCATTACCCTCTGTTACTGGTCCCCATGCCTCCCAACTTGGGAGGCATGGAAACATATCAGTGGGCAGCAGGTGAGGTGGCTCCAAATATATTTGAGAGGTCGGGGTGGAAATAAATGCCGGTCAACCCTGCGTCTTCAACGGCCCGCTTAAAGGCATCTGTACAGAATACGCCATGGTAGAAGTCAGCTTTACACTTAAATACCATGGTGGATTCTGGGAGCTTGTCTTCCAAGATGCCCAGGTTCTGCAGCTCACCAAACTCGTCCGCAGTAGTCACACTTTGATCCAGTGCATCATGATCCTCCGCGATAGTTAGCGGGTTAAAGATATATCCAGTTCCCCCCTCGTAGACTACCGGAAGGAATTCCCCGTCTTGTTTCAAGTCCTCGTGAAGCTGGCTATAGGCTCGCT # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCCTTTCAAATCAGGGCATCTTTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 4 3540088-3539423 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014864.1 Microbulbifer thermotolerans strain DAU221 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 3540087 36 100.0 34 .................................... TTGCCTTCTACGTCAACGCCACCAACGAAGTTGA 3540017 36 100.0 35 .................................... TAAGCCATCGTCATGATGTGCGTAAGGTTAATGGC 3539946 36 100.0 33 .................................... GGCTTGAACGTGAACGGATTGTTTTTCCTCCCG 3539877 36 100.0 35 .................................... CCAGTGCCGTGGGGAACTTTCACTTTATCACCAAC 3539806 36 100.0 32 .................................... GATGCTCGGAGCCTACTGAGCTTAATTGATCT 3539738 36 100.0 34 .................................... AGAAAAAACTTAGCATTACTGTCCCCCTTTGTTT 3539668 36 97.2 35 ................A................... ACATCATCGTGGTTCGGTGTGCCGTATACGCAATC 3539597 36 100.0 34 .................................... CGAGAAATGAGACAAACTGCTCCTGTGATACGTT 3539527 36 100.0 33 .................................... ACGCTATGACAGGCACAGATACAACCTTTCCGC 3539458 36 97.2 0 ..................................C. | ========== ====== ====== ====== ==================================== =================================== ================== 10 36 99.4 34 GTTTGAAAGATGCCCTGATTTGAAAGGGATTAAGAC # Left flank : AGGCGAAGGAAGTGCGCAAAAAACTGCCGCGCCTGCAGGACCTGGGCCGGGGGCTAACCCTTGTGTCCCGCCGGGAAGGCGTGAAAAACGAACTGGACCTGGCGCTGCTGTACGACAACCGCCTGCATATTATCGAGTGCAAAACCCGCCACTACAATGCGGAGGAGGAAGACGCGGCCGAAGCCCTCTACAAGCTCGCCACCCTGGTGCGCCAGCTGGGCGGCATCCGCGCCCGCGCCATGCTGGTGAGCCATTACCCGCTGAACAAAGCGGACCGCCGCCGCGCGGAGGTACTCGATATACAAGTGGTAGACGGGCGGAACGTCAGGGATTTCCGCAGCCGGCTGTGTCAGTGGCTGGGTGTTGACACCGTTTAAGGTGGAGAGGGCGGCTAGAGTGCGAAAATTTGTTTAAATTTCATACAACTTTTCTGGGAGAGACCGTCTTGCCAAGCCCCCTTTGTAACTTATTGAAAATAAAGGGAAAATTGATGGGGGTCA # Right flank : CCCAAATTGGATACGGCTTCCACTCCAATCTGCCGACTTTCATCTAAGGGCAGCGCCTTGTCATTACGCCATTGCTAGAACAGTCAAGTAGCTAATGAGAAAAGGCTTTGATCGCGGCCCTTTCGTGAAACAACCTGCAAAACCGCACCACCTCAATGGTAGCCCGTTGTCTCCCGAATCCCCCTCCAGGTATCATCGGAAACCGCATAGGAAGACCTTCTTCAAAGGAATAACCCACCATGACACGAGCTCCACTGTCAAAAAAGTATCACGAGATGGACCGAGTAGACCGCGCTATTGCTGAATTTGCCTCCCTAGAAAAACCTACCGTATCGGACTTAAATCGAGTACGTACAATCTCACAGGTCGAGGAGGAGCTTGACCGGTACAGAGCCGATGGGAAGGAGATGACCCAAAAGGAACTGGTACAGGAAGCCCACAATTCTGCCCGTCTTGGAAAACACATGGGGCTAAACGGCGATCCCCGCCCCCACAATCTG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAAGATGCCCTGATTTGAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //