Array 1 21986-23469 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHXQ01000009.1 Chryseotalea sanaruensis strain Ys Contig09, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21986 36 100.0 30 .................................... ACATACAATGTTTCAAGCTTGACCACTACA 22052 36 100.0 29 .................................... TCATCATCTTAATGCTACTATTCCTTACG 22117 36 100.0 30 .................................... TGCACAGTTTCAAATGAAATTCAATGGCCA 22183 36 100.0 30 .................................... GCACTATCCTCAATACTTCCCATCATCATG 22249 36 100.0 30 .................................... AGCAGTAGCTGCAACTGAAAAAGTTGTATT 22315 36 100.0 29 .................................... ATGGATTGGCCTCGCCATCGGTGCGGTCG 22380 36 100.0 30 .................................... AAAATCTATATTCATTCAAAGGCCTTTCTT 22446 36 100.0 29 .................................... TAATAAGCTTAACATGGCGAAGCTTTCAG 22511 36 100.0 30 .................................... TTTCTTTCATTTGAGCCTAAAACAAAAAAC 22577 36 100.0 29 .................................... TTAGAGCTGTATAACGAAACTTTGCCTGT 22642 36 100.0 30 .................................... TATCATGAGCGGCTACTTCTATCCGATACC 22708 36 100.0 30 .................................... TATGGTGGTGCGATTAGATCTAATTTGGAG 22774 36 100.0 30 .................................... ATGGCCACTTCAAAGCCATGTTGTACCAGC 22840 36 100.0 30 .................................... TCATTATTGAGGGGGTTAATAAGACAATGA 22906 36 100.0 30 .................................... TAACGATAAGGATAACGGCCGACCAGTTGG 22972 36 100.0 30 .................................... ACCGCTGCCTGGCAAGCCCCAAAACATCAT 23038 36 100.0 30 .................................... TGCGTTGGATGTGTACTGATAAAAAGGCGA 23104 36 100.0 30 .................................... AGCAATGGTGTATTGTCTGCCTTTTTCTTG 23170 36 100.0 30 .................................... AACATTCAGTGTTTCAATTTACGTTTGGTG 23236 36 100.0 30 .................................... ATAAGAGCGACAGCGAAAAAGTAGGGCTGT 23302 36 100.0 30 .................................... CACACCCCTGACGATGTCGCGAGCACCTTG 23368 36 100.0 30 .................................... ACCTCATTATCACTTTTGGCACAGGTATCC 23434 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 100.0 30 GTTGTCAAAGATCGTTTGTTGAAAGCAAATCACAAC # Left flank : AAAGTGCTTTGAAGGGAAAGCTAAGCGGATAATATACCCGGAGTTGTCCGATTAAGATGCGCCTCAATGAATATCGCATTATGTGGGTAATGGTATTTTTCGACCTGCCGGTAGAAACCAAAAAGGACAGGAAGAACTATGCCGAATTCCGAAAAAGTATGCTGAAGGACGGTTTCACCATGTTTCAGTTCAGTGCCTACATGCGCCATTGCCCAAGTCGGGAGAATGCCGATGTTCATGTTAAGCGAGTGCTCAAAAACCTGCCACCCAAAGGGCACGTGGGTATTTTAACCATTACCGATAAACAGTTTGGGATGATGCAGATTTTTTACGGCAGGGAGGAAAAAGAAAAGCCTCCAGTACCCCAACAACTTGAATTGTTCTAGGTAAAGGAGGCTTATTTTTGACAACACATCCACTAACAGGCAAGCATCTAACCCATTTTTAACACACTAAAAGGCTTGTAACACACTGATTTACAGTGGAAATTCGCCAAATTA # Right flank : AAACCAGCGTTGACAAATTGCAAAAGGTTGTACTAACCCCCTATAAGACTGGACAAGAATCTGAAAACAGATTTATAACAGTTAAATTAGGGAAATATGCCAAGAGGAAAAAGAACATTCACACCAGAAGAGCGATTAAGCCTTTTACAGGAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTCAAAGATCGTTTGTTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 213-445 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHXQ01000003.1 Chryseotalea sanaruensis strain Ys Contig03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 213 36 100.0 30 .................................... AAGTGCCGAAAGGTATGGCGCAATGCATAC 279 36 97.2 30 .....T.............................. TGGAGCGCCTGTGGATATGAGAGCAGTGAA 345 36 100.0 29 .................................... TTCTGGGTTCGAGTCTCAGGTCAGATACT 410 36 94.4 0 .................A..C............... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 97.9 30 GTTGTCAAAGATCGTTTGTTGAAAGCAAATCACAAC # Left flank : GCGGACAGGTGGCTGGAGCAGTCGAGTCAAGGCCGAATGATTCCTTAAAAAATCAAACACAAAATCATTCGCTCTGTACCAGCCTTGACTCGGCTGATCCAGACACATACTTTTGCTTAGAAGATGAGCAGGAAAACCGACAAGCAATACACATTTTAAACAACAATTCTGTCCAACTTATAGGGGGTTAGTACACAATCAGGTACAGGTTCG # Right flank : CGAATGTCAGCTCGCACCAATGCTGACCAAAAATATCATATAACGACCTCATTTTAAATAAACTCACTGTTAAAAGAAAAAAACAGAGGTTGAAGAACCTGAAAGAGATAGAAAACAAAAGTTAGACGAAGAATAATTTGCTTCCAAACGAGGCTTTAAAAACCCCATCTGTAACCAACAAAAAAGCCTTCAACTTTAAAAGTTGAAGGCTTTAATCTAAAGTACCTCAGGCCGGAATCGAACCGGCACACCTTACGGTACACGATTTTGAGTCGTGCGCGTCTACCAGTTCCGCCACTAAGGCATTTTTAAGCATTTAAGGCACTGGTTTTCCTTAACGGGATGCAAATATCTACAAAGTTTACTTCTTGGCAAAAACAAAAATCAGAATTTATACAATTCCCATCTCCTCTTCCAGCCCTTCTTTTATACTTAGCCAAAGTCTGTTAAAATCTTCAATATTCCCAGAAATGCCTTCAAAACCCCGCTCTTCAATGTTA # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTCAAAGATCGTTTGTTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //