Array 1 16374-13253 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPR010000005.1 Pseudoflavonifractor sp. NSJ-25 AT-D16-29_ctg05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 16373 33 100.0 34 ................................. TCGCTCTGGACAGGGAGCGCGCTGCCTCCAGACA 16306 33 100.0 34 ................................. CTGACGCTCTTGAAGTGCAGGTTGCGGAAATCCT 16239 33 100.0 34 ................................. ATCTCCGGGAAATCCCGCAGGAGCTCGTCCCAGC 16172 33 100.0 33 ................................. GCAGAGTCACATGCAGACCGCCGATTGATGCGG 16106 33 100.0 35 ................................. ATACATACGACGACGCACACATTCCCATCCACAGG 16038 33 100.0 33 ................................. CGGTGAAGAGACATTGCAAAATTATTATGATAC 15972 33 100.0 33 ................................. ATTTTGCTCCTAAGTTTAAAGAGGGGTGCAATA 15906 33 100.0 33 ................................. TCTTTTGTTTACTTTTTATTTTAACAGGCTCTA 15840 33 100.0 34 ................................. TTCTTGCTCTCCGCCCGGATGCGGCTCAGCTCCG 15773 33 100.0 34 ................................. GTAACTCTTGCATTTTTTGAATCTTTCGGTGGAA 15706 33 100.0 35 ................................. CAAGCTTATAAAATATAAGCAAAAACTCAGCCGCC 15638 33 100.0 37 ................................. ATATTTCCACCTTAAATAAAAAGCGGGGTATAAAACC 15568 33 100.0 34 ................................. CAATAGGGAATTTAACTGTTCCGCCACCAGAAGC 15501 33 100.0 33 ................................. AAATACGCTTTTAGTTTCTACTTCATCTGAATA 15435 33 100.0 34 ................................. CTCTAAGAGTTCTGAGGACGAAGAGGACGAGGAC 15368 33 100.0 33 ................................. AACCGGGTATGCTATTATCTCTCTCGAATTGAT 15302 33 100.0 34 ................................. TACATCAAAAATCCATTATAGTCAATAGCCATAA 15235 33 100.0 35 ................................. CCGCCAGGAGAGACCGCTTGACCAGGACATTTTTG 15167 33 100.0 34 ................................. CCTGTCGAACTACTCCCACCAGAGCGCTATCATG 15100 33 100.0 35 ................................. ACTGTGCCCCGACTCACGTCCAGCTCAGCGGCCAC 15032 33 100.0 33 ................................. CCGCCTGACGCGTCATCTCCATGTCGGTCAGTT 14966 33 100.0 35 ................................. AGTTTATACAGATGGAGCTTGTAAAGGAAATCCCG 14898 33 100.0 33 ................................. TATCCCTCTAAGATATGCAGTATCAACAATAGT 14832 33 100.0 33 ................................. TGAGTTTTAACAAGATTTGAACAATTGCAACAA 14766 33 100.0 34 ................................. TGGACGAGACGCTGTGGCTCCTCTCGGCCATGCT 14699 33 100.0 35 ................................. CACGCGGGTGGTGCGGTCCTGCCACGAGCGATACG 14631 33 100.0 33 ................................. CGCTTTAACAAGAGCAAGAAGTGAAAATTTAGG 14565 33 100.0 33 ................................. AAGATAGATCGCGCGCGCACGCGCGCGTGCGCG 14499 33 100.0 34 ................................. TGGGTGAGACGGCGGATGGCCCATCGGAGGCAGC 14432 33 100.0 36 ................................. ATGCTCCTCGGCTTGCTATAATACAGGATCACTCCA 14363 33 100.0 36 ................................. ATGCTCCTCGGCTTGCTATAATACAGGATCACTCCA 14294 33 100.0 36 ................................. AGGCCGTGTATAGGCTCGGAGAACTGCACCGTGTCG 14225 33 100.0 33 ................................. ATTTCTCCTCCAATTCCTGGACGATTGCCTCAA 14159 33 100.0 34 ................................. ACGATCACCAGGTTATTTGCGCCGCAGTCTCCGG 14092 33 100.0 35 ................................. ATAGAGAAGAATGCTGAGATCAGACATCATTCCGA 14024 33 100.0 34 ................................. TTTCACCATCTGACGTGTTTACCGTCCAACCGCG 13957 33 100.0 36 ................................. TCCGTCATGTCGAGGGCGGACGAACCGGCGTAGCTT 13888 33 100.0 35 ................................. TGGAGCTGCGGCTTTGTGGCGATTACCGTAAAGGG 13820 33 100.0 34 ................................. ATCAAAGATGTATTCTGGGCGTAAAAGCCGTCAC 13753 33 100.0 33 ................................. ACGCTCCAGCGGTTGGAGGAAATGGCATCCAAC 13687 33 100.0 34 ................................. CAAAAATATCGTGCTGGTCAAAAATACGGTTGAG 13620 33 100.0 35 ................................. CAGAGCCGCCTGTACCGGGTCTGTCCGGAGCCCCC 13552 33 100.0 34 ................................. ACGCCCTTGGGCTTTCGCAGCACGCCGTCTTCCC 13485 33 100.0 34 ................................. AACGACAATATGGCGACCATCACCACCGAGACCG 13418 33 100.0 34 ................................. CAACAGCAGCAGAGAGGTAGGCGCAAGCCCCGGC 13351 33 93.9 33 .........T..T.................... AACTTGTGGCTACGGCAGCCCTCCCGAACCAAC 13285 32 78.8 0 ............T....A......-.CAC...G | A [13264] ========== ====== ====== ====== ================================= ===================================== ================== 47 33 99.4 34 GTCGCTCCCCACACGGGGAGCGTGGATTGAAAT # Left flank : TGTGACCTGAAGGCCTATCCACCCTTTTTGTGGAAGTGAGGATGCTATGCTGGTACTGATCACATACGATGTCAATACAGCAGATGCCGCCGGACGCAGGCGTCTGCGCCAAATTGCCAGGCAATGTGTCAACTATGGGCAGCGGGTCCAATGCTCGGTATTTGAATGCCTGCTGGATTCGGCCCAATGCAAACTGCTGCAGGCAAAGCTGCTTTCCATTATTGATCAGGAAAAAGACAGTCTGCGCTTTTATTATCTTGGGAAACAATATGAAAACAAAATTGAGCACTTTGGCTGTAAATCCTCTTATCTCCCGGAAGAGCCGTTGATTCTATAATGGTGCGAAGAGACAGCAGTCACATATTCCCCTGGAGGTTCGCACTGGAATAGAGCCCTTTCTTGCAGCGCGGAAGCAGTGTCGTCTGACAAAACTTACTCAGATACGCTAAATTTTATCTAAGTTCTATAAGTTTACAGGTGTGTATTTGTACATATCTGCT # Right flank : GCCCCCTGATGTAGTCTATTTTCCTACATCAGGGGGCCTTGTCATAGAAAGATGATTGACCACTATATCCACTTTTCCAATTATGAACGCGTTCCAGCTAAAAATGAAAGAGACAAATGGCTCATCTTTTACATCAAAACCTTTGTCACACTCCCAGCGCTTACTTCGCCGCGCCGGCCACACTTCCCTCTTCGGCCGCAGAGAGAAAGTCCAGCTGCTCCTTGCTGAGCTGGATCTTCAGGGTCCCCATTGCCTCTTCAAACTGGGCCATATTTGTGGTGGTGACCAGCGGAATGGCGGCCGGATCTTGGTGCATGAGCCAGTAGTAGACGATCTGAACCTTGCTGTACCCCGTCTCTCTGGCCACCCGATCCAGCGCCGCCAGACGTGCCTGGGCATCTGCTCCAACATACTGGGCCATAAAGGGCTTCTCCGGATTGACATAGGCGCCCTTCAGCAGAGGGCAGTAGGCCAGCAGTGTGATCCCCGTATCCCGGATA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCACACGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //