Array 1 45946-47235 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLJL01000005.1 Sphingomonas sp. S-NIH.Pt1_0416 NODE_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45946 36 100.0 30 .................................... CGGTTGGCTTTACGGCCACGCCTACGCGCT 46012 36 100.0 30 .................................... TCATCGGCCTTGTCCATGACGAGTGTATTA 46078 36 100.0 30 .................................... ACACTGCCGGTTGGGACGTGGAGGACGCGG 46144 36 100.0 30 .................................... AATTCGCTGGTGCTCATCGGCGTGACACCA 46210 36 100.0 30 .................................... GCTCCCGAAGAAGCCCAGATGCTGCAATCT 46276 36 100.0 30 .................................... CGTGCGATCAAGGGCGGCAACAGGCTTTCA 46342 36 100.0 30 .................................... CACCCACCGGCACCCCGCCAGTAGCTGCGG 46408 36 100.0 30 .................................... TCTGCAAAGCGTGTGCGCTCTTCGTCCTTG 46474 36 100.0 30 .................................... ATCCCAGGTCGCGGCCCGGCAGCTCGGCCT 46540 36 100.0 30 .................................... CACCGCGATGGCGTTGGCCTCCTCCGGGGT 46606 36 100.0 30 .................................... TGAAGCCGGTTTCAGAATGCTAGACCTTCT 46672 36 100.0 30 .................................... ACGCTCTATTATGACCTGATCGGTACATTC 46738 36 100.0 30 .................................... ACACGAACTGACGGATGCGTCCAGCACTGG 46804 36 100.0 30 .................................... GGCCCTCCAGATGTTCGCGTTCGTCGATCA 46870 36 100.0 30 .................................... GTTCCTGTTCGCGTTCATATAAGGCGCGTA 46936 36 100.0 30 .................................... CCTCCGCGCGTCCGTAAGCCAATCCGCATA 47002 36 100.0 30 .................................... ATCCCAGATGCAGAGTCAAAAGCGGCGGTA 47068 36 100.0 30 .................................... CTTGCGGCCCCGATGGCGACCCGATCGCGC 47134 36 100.0 30 .................................... AGCGCGCGCAAGCGATGGCCGGGGCGCGCC 47200 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 GTTGCCGCTGGACCGCAATCTCTGAGCGGCTATGCT # Left flank : CCGGCATCGTGAACCACGATGTCATTCCCAGCGTCGTTTACACCATGCCCGAGATCGCCGGTGTCGGCCTGTCGGAAGAGGCCGCCAAAGAGCGCGGCGAGGTCAAGGTCGGCAAGTTCCCCTTCATGGCGAACAGCCGCGCCAAGACCAACCGCGACACCGACGGCTTCGTGAAGGTCATCGCCGACGCCAAGACGGACCGCGTGCTGGGCGTGTGGATCATCTCGAGCCTGGCTGGCACGATGATCGCGCAGGCGGCACAGGCGATGGAGTTCGGCGCGACGTCGGAAGACATCGCCTATACCTGCCACGCGCATCCGACCCATGCCGAGGCGCTTAAGGAAGCCGCCATGGCGGTGCAGGGCAAGCCGATCCATATCTGATCGGGTTTTGCCGGATGACGAAAGGGGCGGGCGCTGCGAAGTGCCTGCCCTTTTTGTTTGGCGGTACGCGGGAGCAATCCGAAGAACACATTATGCGCCGCCCTCTCGCACGGGGAG # Right flank : TGGATGGTGGGGTATCGCGTTGATCTGCAACGACGAAATCCACCATCCGGCATAGTCAAAACGGTCGCGAAGCATCAGAACAGGGCCAGTTGGTCGGGGTTTTTGCGCGGTTGCCGGCGGGATTGGCCGGCGAAGCGGATGATATTCTCATATTGGCGGTCGGTGAAGCTCAATATGTGGATCTCGCCCTTGTCGGGCAGGTTCGCCTCGATCCGGCGTAGATAAGCTTCCATCTGCTCCTTGCCGCTGCAGAAACGGGCATAGACCGAGAACTGGCTCTTTTCGAACCCTTCGTCGAGCAGATATTGGCGGAATTTGGTGGCGGCGCGCGACTCGGACTTGGTGGTGACGGGCAGGTCGAACATCACGAAAATCCACATCAGCCGATATCCCGACAGTTGTGCCGCGCCGCTCGCGGGGATGGGCGTGGTGGCGAGACGCGGGCTCATCGCCCGATCAATCCGTCCAGGGCGGCCAGTTCCAGCGCGGAGGGGGGCGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCGCTGGACCGCAATCTCTGAGCGGCTATGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATGAT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.01 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //