Array 1 27035-27728 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAEFD010000032.1 Candidatus Thiosymbion oneisti isolate To1_2018 1091900032, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	====================================	======================================	==================
     27035	    36	  97.2	    37	.T..................................	AATGGTGCCTCGTCATTCATTCCGCTCTCGAATTATC 	
     27108	    36	 100.0	    38	....................................	CGCTATCTCCATGGCACTCCTGCGGCTCGGTCTCAACC	
     27182	    36	 100.0	    37	....................................	AAGAATATCTCGTACTCACTCATGGAGAAGCTAACGA 	
     27255	    36	 100.0	    38	....................................	CCGACCAGCTCCGATCCAAATTCATTCGCGTGGCCCGC	
     27329	    36	 100.0	    37	....................................	AAGAATATCTCGTACTCACTCATGGAGAAGCTAACGA 	
     27402	    36	 100.0	    38	....................................	CCGACCAGCTCCGATCCAAATTCATTCGCGTGGCCCGC	
     27476	    36	 100.0	    35	....................................	CCGAACGCCACCTGCAGGCCGTGCAGTCGCTCGCT   	
     27547	    36	 100.0	    37	....................................	TGCGTATACGGAGGTACACGATAGAGACCAGTAAGCC 	
     27620	    36	 100.0	    37	....................................	AACTAGGATGGACCAGAATACAAACAAGATGGGCGAA 	
     27693	    36	 100.0	     0	....................................	|                                     	
==========	======	======	======	====================================	======================================	==================
        10	    36	  99.7	    37	GCTTCAATGAGGCCGCGGCGATTAGCCGCGGAATAC	                                      	       

# Left flank :   GCCAAAAGGGCCAACGAAATATCGGTAGTCCCGGGGGCCGACAACGTATCGGCGGTTCCGGGGACGCGAGTCCGGCTGGGACCGCCGTCTTTCAGACGGCTCACGGACCCCATCACCAGCTGGTGGCAACGCTCAGAGCAGACGCCCTCTGGGCCGCACCGGATAACAACGCCGGGTGGTGTTGCAACTCTGTTGTCAAAGAGACGCAATATATTGATTTAAAAGTTCTTTTTTCACTAAAACAACAAAGTTAGAACACTACCCAACGCCGAACAGCCGGCAGGTTTGATTCCCGTGTATACGAATGCTGGACACCGGCCTGATGCTCTCCGCGGCGCAGAGCTGCCACCTTCCCACGCAGCACATGGGAACGAGAATGACCGCGTCGGGCCTCACCTTTTACGACACCCTCGAAGGGAGAGGGGTTGGGGTGAGGGCGAAAAAAACAGCGCACGATCGATCACAAACCGCGTCGGTAACGCTTAACTTAATGGCATTGG
# Right flank :  CGGCCCGCGCGGCAGCCCTTTTTTGCCGCGTCTTGCCGGGCCGTTTTCGAAGGCTTGTGGCGAAGCGGTGCGAGCAGGCTTCAGGATACCCAACGAGCCTTTGAATTATAAGCCAATTACCTGATTTTTAAAGAGCGATTTTCTGCGAGCGCTGTCCGAGGTTGCGGGTACTACCGGCGTGCTCGCAGCGGCTCGGCAATGCTATGGGACCTTGAAGAATCCCATCCTGATGATTTTCCGATACGGCGTCGCACAACGCATTTTTTGAGTGCCGTGCCGGTTCATGGACTCAGCGGGCATGGACCGGATCGGGCATCCTGGCCCCACCAGGTCTACAGGGTCCACCCCATCCACGACGGCTACCCCGAACGGACCAGGTCGGACAGCCCGATCCAGCCAGCTACCTTGGGTCCTCAAACGATAACCGGCTCGTGCTCGATCGGGGTGAAATCCGCTTTCCCGAGACTGACGACTCGGGGCACCACCTTATCCGCTACCCC

# Questionable array : NO	 Score: 3.25
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCTTCAATGAGGCCGCGGCGATTAGCCGCGGAATAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-15.90,-14.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [53.3-31.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.01,0.41   Confidence: MEDIUM] 

# Array family : NA
//