Array 1 1-749 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWUZ03000002.1 Acinetobacter baumannii strain UH106_440 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 1 29 100.0 31 ............................. TAAGCTTCAAAAATAGCCATTGATTATAAAA 61 29 100.0 31 ............................. GACAACTTTCCACGGCAATCAGGGCTTTCCA 121 29 100.0 31 ............................. AAAGATGCACGTGGCCTAATGCAAGTTATTC 181 29 100.0 31 ............................. TTAAAATTAGGTGCTGAGTTACCACGGCTCA 241 29 100.0 31 ............................. AAACCAAGAACTTGAAGATTTTGATGCTTAT 301 29 100.0 31 ............................. AAAAATAGTGTGTTAATTATTTATGATGAAA 361 29 96.6 31 ............................C GTATACATGCACATCAATACGATATCCCGAT 421 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 481 29 96.6 31 ............................A TCATCAATAAGTTGGCCTTGATTTAAATAGT 541 29 96.6 31 ............................A GATACAAACGAGTTCGCATCTCGACCAGAAG 601 29 96.6 31 ............................A TTATCCAGATAAAACCATATCTACAAAGTGG 661 29 100.0 31 ............................. CAACCTGAACACAGACATACATGTTCTATTG 721 29 86.2 0 ...GC...................AT... | ========== ====== ====== ====== ============================= =============================== ================== 13 29 97.6 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : | # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4622-4769 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWUZ03000113.1 Acinetobacter baumannii strain UH106_440 contig113, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4622 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 4682 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 4742 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : | # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 577-2759 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWUZ03000073.1 Acinetobacter baumannii strain UH106_440 contig73, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 577 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 637 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 697 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 757 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 817 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 877 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 937 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 997 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 1057 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 1117 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 1177 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 1237 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 1297 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 1357 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 1417 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 1477 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 1537 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 1597 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 1657 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 1717 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 1777 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 1837 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 1897 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 1957 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 2017 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 2077 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 2137 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 2197 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 2257 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 2317 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 2377 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 2437 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 2497 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 2557 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 2612 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 2672 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 2733 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 37 28 98.5 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //