Array 1 494164-494443 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKOA01000010.1 Streptomyces albidoflavus strain Ma1 Scaffold5_2, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ====================================== ================== 494164 26 92.3 36 ..........A............C.. GGTAACCGGCGCAGGAAGACCACCCCCGCCAAATCC G [494187] 494227 26 100.0 38 .......................... TCTGACCGGCACGGTCACGACGAACCGCGCCCCCCCTC 494291 26 92.3 37 .....T........T........... CTTGACCGGCACGGTCACCACGGACCGCACCCCAAGA 494354 26 100.0 38 .......................... TCTGACCGGCACGGTCACCACAGACCGCACCCCCAAAA 494418 26 88.5 0 ...............C........CG | ========== ====== ====== ====== ========================== ====================================== ================== 5 26 94.6 38 CAGCCCGGCCGGCGCTTGAGGCCATC # Left flank : CCGCACGCCGCGACGGCCGGGAGTGCGAGGACTCCGGTCGTCAGGAGCGCGACCGAACGCCGTCTTGCGCCGTCGTGGAACATGGGGCGTACCTCCGGGAGTCACCGGGATTTGATCACGTTTGGCGGTATATGGTGCTGATCACATCTATTGCCACGGAACGCCTCCGGCGCGGGCCCGTCGCGCCGACACGCCGTGAAGGGGTGCGGGTTCCACCCGGGCGGACGCGCCTACCCCGCCGCCTGGGCCCGCCTCAGGCGCCGGCAGGGCTGTGAGGGCTTGGCTGCGGTTTCTGCCGCAGGTCAGGGATGGCCTCAAGCGCCGGCCGGGCTGGAGTTTGGCTGGGCTGACTTTGCCCGGGAGTGGGCCGGGTGGGGTGGTTCGGTGGCGCGCCTGGAGAACAGAAGGGCCCCGGTGGGCTGGGCCGTAGGGTCCTTCGGTCGTTCGGTGGGGCTGTTGTTGTGAGGCGGGATGTCGGGGGGTGGGCCCCACACCCACTC # Right flank : GCCAGGGCGGGCGGGTTGTCCACGCGCACCCCCCACGTTGAGCGGAGTTTCCCGCCTCCCCGCTCGCCAGGGCGACCCCGTCGCCCTACTCTCCGAAGGAGCGGTCAAGCGCGGCGAAGGGTGACACGGTGCGGGCGGACCTGATCCTGCCGATCCTGGTGCTGGCAGCCGCACTGACCGCCGCCGTGTACACGTACCGCCGGCGCAGACGCCGGGTCAGCACCCGCACCACCCCGGCGGGGACCGAGATATGGGGAGCGGGCGGCGACACCCGCACCCCGGTGCTCTCCCCGGCGGAGGCCCTGGAGCAGGCGGAGGACGCGATCCGGATCAGGGCGGCCCAGGTGGCGGCCGCCTCCCCCGACGCCCCTCCGCAGGCCCTGATCGCCGCCGAGGCGGCCCTGACGACGGCCCGCACGGAACTGGCGGAGGCCCGCCGCCAGTGGGCCAAGGGCGAGAACCCGGCGGCCGTACGCGAGCACAGCGCGCGGGCCGACGCC # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [3-3] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 49805-50327 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKOA01000001.1 Streptomyces albidoflavus strain Ma1 Scaffold14_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 49805 28 100.0 33 ............................ CGTGGCTCGGCTACGCGGTCGCGCTGGACCGCT 49866 28 100.0 33 ............................ CTCCGCCTGCACCTCAGGATCGGCGCGCCCGTC 49927 28 96.4 33 .....................A...... GGAGGAACTGCGGGCCCAAAGCGAGGTGGACAC 49988 28 100.0 33 ............................ GGACAACATCGCTATCTGGGACGCCACCAGCAC 50049 28 92.9 33 .............CA............. CTACCCGGTCGGCAGGTCGTCCGGCGGCAGGTG 50110 28 92.9 33 ............TA.............. GGCCGCCGATCTGATGGCCGTGGTGCACGGTGG 50171 28 96.4 33 ...........A................ GCTACGGACGATCCTGGTTGACGGCCTCGGCGA 50232 28 85.7 38 ...........AT...G.....G..... CAGCCCGCTGGCCACCACTACAGTCTCGTCCTCGGCAT CG,G [50240,50249] 50301 27 75.0 0 ..G..........A......C.-.G.CG | ========== ====== ====== ====== ============================ ====================================== ================== 9 28 93.3 34 GGACAGCCCACGCGCGTGGGGGTACGAC # Left flank : GGCTGCGGCCGCGAGCCGCGTCTACGGCCGCGGCCGGCCGTTGACCCCGCGGCTCCACGAAGGTGTGCGGCTGCGGCGCCCTCCCAAGAAGAGGCGGCCCGCCAGGAGCCATACGCGTTGCCGCCCTGCCGTGACCGGGACGTATCCGCAGCCGGACGACCCAAAATCGTCCGAGTCCCTCGTCGGCCGGAGTTGACTCCCCGCAAGGGCCTGTGGCACCGGGCATCACCCGTCGACCCAGTCGGCAACGTCGGCAGTGGTGTCTGCGCCGCTGACCAGGCTCCGCCGCCCGCCGGACGTTCCTGCATCCTTCGGCAGAGCGCTCAACAACGACGAGTCGGCCCGGCCCCACACGCGCGTGCACGAGTCAAAGCGGCAAGACGACCACGGCATCGACGCGAACGTTCTAGGCTCTCAGAACCGAGCTACCACAAGCCGCCAACGCGGACACAACGCGGACACTGAATGTCCTCACGACGCAAAACACCAGCTCGCGAAGC # Right flank : GCGGCACCGAGACGCGGCATGAGAGCGGCGGCGGCAAGCGGGCAACCCAACGCGAAGGGGTGCCGCCGAGGCGTCGCAGGGATCTCAGCTGACTTGCTCGACGGCACCGGAACCTTCCTCCTGGGCTGCGGGTTCCGGTCCCTTTGCGGCGACGCCGCGGCCATCACCACCCTGCTGGCAGCGCCGGGCAGCCAAGCCTCCTAGGAGGACGTTTACCTCCAACGCCGCGCTGGGCTCTTGCACGGCACAGGGCCGGTCCCGGCAACTGACCACCAGCCTGTCCGCCGGGAGCACCAGAAGGCCGCCTGACGGGTTTCACAGGGAGGCTGAGGTGTGGACGGCGTCGTAGAGGTGCTGGCCGTGGGCCCATCGTTTGAGGGCCGGGCGGTCCATGGCGGTCAGCTGGTGGCGGGCGGCGAACTTCATGGCAGGGTCGGTGAAGCCGTTGAGGCCGATGATGACGGCGTGGTCGGCGCCGTGTTCGGGGCGGGCGGTGCCGT # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGACAGCCCACGCGCGTGGGGGTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 53371-53702 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKOA01000001.1 Streptomyces albidoflavus strain Ma1 Scaffold14_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 53371 28 100.0 33 ............................ CAACGGTCCGCTCGACGAAGTCCCGGACCAACT 53432 28 100.0 33 ............................ GGCCTGCTCCGTATCGTGGGCAGCCGTCCAGTC 53493 28 100.0 33 ............................ GCACGCGGGCGCCCTCAAGATGTCCAAGGGAGA 53554 26 92.9 33 .............--............. GCACCGTAGACGCCCGCCCCGCGTCACTAACGC 53613 28 96.4 33 ...............A............ GTCGTCCACCGTGGTGTTCCCGGACGGGCACAT 53674 28 92.9 0 .A...........G.............. | G [53699] ========== ====== ====== ====== ============================ ================================= ================== 6 28 97.0 33 GGGCAACCCACGCACGTGGGGGTACGAC # Left flank : AAAGCATGTCTTCCACGCGAAAGCGCCACCGCTCGCTTGCGCGTCGCCTGTAACGAGCCGGCACCAGACGAAGCGAGTCGCAGTATCACGCTGCCCGTCTTCTCCCTCGCGCCGACCGGCGTCTGCATGTCGGTGCGGGTAACTCCCAGGTGTGGACCATTACCTGAGGCGCCCTGCCGGAAGGCGCAGGGGCCTAGAACGCCGGGAGGCGGGAGGCACCGGGCTTCCCTCATCGGCGGAGACGGCAACGTCGGCAGGGGCGTCTGCGTCGTTGATCAGGCCCCGCCAGATGGGTGCTGACCGCCGTACGTGTGTCCTTCAGCGGAGCGCTGGACATCGATGAAGTTGCCCCGGCCGCACGTGTGCGACGAATCGAACCGGACGGCCACAGCATCGACGAAAAAGTTCTAGGCTCCCAGAACCGAGCGACCACAAGCCGTCGATGCGGAACAACGCGGACACTGAACGTCCTCGCGATGCAAAGCACCAGCTCACGAAGG # Right flank : CCTGCTCCAGCGGCCGCGATGTCCAAGAGATCGATGGACAACCAGGTGCCTGTGGGCTCATCTCGTCACCGGGTGGAAGGCATGAACCCACAAAAGTTGGCCCGGCCACACACGCGCCTGCACGAGCCGAACCCAGGACAACACCCGCAGCATCGCCGAAGACGTTCTAGGCTCTCAGAGGCAAGCAACAACAAGCCGTCAATGCGGACACAACGCGGACACTGAACGTTCTCGCGATGCAAAGCACCAGCTCGCGAAGGGGGCAGCCCACGCGCGTGGGGGTACGACCGGACTGAGAGCCTGCTCCAGAGAACCTCAACGGGGGCAGCCCACGCGCGTGGGGGTACGACCGTCGACGGCGCAGGCAAGGCCACCACACCCGGGGGCAGCCCACGCGCGTGGGGGTACGACCCGGTGCCCGTACTCCGGAGGACGAGCCGAGCGGGGCAGCCCACGCGCGTGGGGGTACGACCCCGTCTCGACGAGGAGCCGCTCAACCT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCAACCCACGCACGTGGGGGTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 3 53962-54357 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKOA01000001.1 Streptomyces albidoflavus strain Ma1 Scaffold14_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 53962 29 100.0 33 ............................. GGACTGAGAGCCTGCTCCAGAGAACCTCAACGG 54024 29 100.0 32 ............................. GTCGACGGCGCAGGCAAGGCCACCACACCCGG 54085 29 100.0 32 ............................. CGGTGCCCGTACTCCGGAGGACGAGCCGAGCG 54146 29 100.0 32 ............................. CCGTCTCGACGAGGAGCCGCTCAACCTGCGCC 54207 29 96.6 32 ............................G TACAAGGCCCGCACGGGCTCTGTGAAGGTCCC 54268 29 93.1 32 ........................T...G CGGATTGCGCCCAAGGGCCGCATTCTCGTGGT 54329 29 93.1 0 ..A.........................G | ========== ====== ====== ====== ============================= ================================= ================== 7 29 97.5 32 GGGCAGCCCACGCGCGTGGGGGTACGACC # Left flank : CCTGCTCCGTATCGTGGGCAGCCGTCCAGTCGGGCAACCCACGCACGTGGGGGTACGACGCACGCGGGCGCCCTCAAGATGTCCAAGGGAGAGGGCAACCCACGCGTGGGGGTACGACGCACCGTAGACGCCCGCCCCGCGTCACTAACGCGGGCAACCCACGCACATGGGGGTACGACGTCGTCCACCGTGGTGTTCCCGGACGGGCACATGAGCAACCCACGCGCGTGGGGGTACGGACCTGCTCCAGCGGCCGCGATGTCCAAGAGATCGATGGACAACCAGGTGCCTGTGGGCTCATCTCGTCACCGGGTGGAAGGCATGAACCCACAAAAGTTGGCCCGGCCACACACGCGCCTGCACGAGCCGAACCCAGGACAACACCCGCAGCATCGCCGAAGACGTTCTAGGCTCTCAGAGGCAAGCAACAACAAGCCGTCAATGCGGACACAACGCGGACACTGAACGTTCTCGCGATGCAAAGCACCAGCTCGCGAAGG # Right flank : GACCTGCGACAGGTAGGCGAGGTTGCCCCTGTGGTGGGTGAAGAACCCACGATGCTAAAAGGTGCTCTGCGCCCGGCTGGGTGACAGCCCACACTCACGGAGGTTGGCCAGCAGGCGAGGCACAACAACTCCACGCCCTTGGAGGCAACCCTGGCCACTGCTCGCTGCGGAACTAGAGGTACGAGGCAACCCTCATACGCAAGAACACGCCATTGGAAGTTGCATCTCGATTTCGTGGGACATTCGCATCAACTTTTCGCGGCCACTCCATCGGAACCAAGTAAAACAGTAGGTCACCACACAGATGGCGCGAAATCTCGACGCAATAAATCACGAAGATCTAATGCAACTCTCCAGTTGTCCTTCGGGAATCCGTACTGCATGGCCTCGCGCTTGCCCATCTGGTCCGGCACGAGGACGGCCAGTGTCCAGTTGTCCTGCTGCGTCTCGATCATCTGCGCGACCGCTGTGACCAGTTCCTTCGGCTTCTGGGAAGGGGC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCAGCCCACGCGCGTGGGGGTACGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //