Array 1 20694-19404 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZXY01000025.1 Neisseria meningitidis strain Neisseria meningitidis isolate B392, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 20693 36 97.2 30 ........G........................... TTCCCATCTTACTCTCCCCTTGCCACTCAA 20627 36 100.0 30 .................................... CTCAACATTGTTGTAATCTGACCGCAACGC 20561 36 100.0 30 .................................... ACAATGTTTCGGCGCAACACATCAGCAGGG 20495 36 100.0 30 .................................... AATTTACCAAAACAAACCAATACCATGCAC 20429 36 100.0 30 .................................... GTGTGTTCGGCAACTCTGACCGCATGACGA 20363 36 100.0 30 .................................... GACGTCAAATCGCGTTACGCCATGGCGCAG 20297 36 100.0 30 .................................... AATCGCCTCGAGCCATACGGAATCAAGCTC 20231 36 100.0 30 .................................... CCAGCCTACAAACCCTACAATCGCAATCAA 20165 36 100.0 30 .................................... TATCTTTCTCGCCAAACCAACCGTTGTAGG 20099 36 100.0 30 .................................... ATGTTTTTGGCGAGATGGTCGTATGTATCG 20033 36 100.0 30 .................................... GTTCCGCAATCTGCGTAACTTGATTGCACA 19967 36 100.0 30 .................................... CGCCAGCAGTTGCTACTTCAGCAGGCAAGT 19901 36 100.0 30 .................................... CGCCCTAGTTAGTTATGCAATCGGTAGGTC 19835 36 100.0 30 .................................... GCTTGTTTTTTTGCTCCGCATTTTTTCCGA 19769 36 100.0 30 .................................... TAGCTGTAATTACCATTGTCAGCAAAAGGG 19703 36 100.0 30 .................................... AGCAAGTGCAAAGTGTTGCACATAAAAGGG 19637 36 100.0 30 .................................... CCAATGAAGAACGAGAATGCGCCGAACAGG 19571 36 100.0 30 .................................... CATGGCGGTCGTCATATGGGGGTTCCTTTG 19505 36 100.0 30 .................................... GTGCGCCTGTTGAACTTTCTAATACATTCA 19439 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.9 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGTGCGGTTTGCTGAAAGAAGGTGCTCATGGAAAATCCCCTAAATGGCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATGCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCAGTTACGCCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //