Array 1 21572-23059 **** Predicted by CRISPRDetect 2.4 *** >NZ_FFCL01000006.1 Neisseria meningitidis strain 2842STDY5881450, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21572 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 21638 36 97.2 30 ............A....................... AATCAGACCGACTTTACAACGAAGGTTTGA 21704 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 21770 36 100.0 30 .................................... AAGCAAATCATTTTCATAGTCAGCAGCTTC 21836 36 97.2 30 ......................T............. ACGTGAGTTTGTCTATGAGTTCGACGGCGT 21902 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 21968 36 100.0 30 .................................... CCGACCGTGGGAACGACGGTATAGTGGATT 22034 36 100.0 30 .................................... TAAAAAGATACTCATTCTGCCTCCGTATTA 22100 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 22166 36 100.0 30 .................................... TAACGATTGAAAATGAGTACGCATTAAGTA 22232 36 100.0 30 .................................... GAACACTTGAGCAATTTAATACGCGAACAA 22298 36 100.0 30 .................................... TGATTCTCGCCTATATGAAACGGAACAGTT 22364 36 100.0 30 .................................... TCTATCTTAATTTCTCTTTGTTCTTCTTTA 22430 36 100.0 30 .................................... CATTGCGCCCATTTTGTCTATCCGAACAAT 22496 36 100.0 30 .................................... ACCACCGCCGCTTATATAGAAAAGCTGTAA 22562 36 100.0 30 .................................... AAAAAAGTTGCGGGATAAGTTACAGTTTGA 22628 36 100.0 30 .................................... TAATTGATTTTTAAGGTTAATCAGTTTTTG 22694 36 100.0 30 .................................... CTATTTTCCTGCACCTACAACCCCCGAACG 22760 36 100.0 30 .................................... CTTTCTGTGCGATGTATTGAAAAAGCTGAG 22826 36 100.0 30 .................................... ATGCTGGATACGGCATTGATGCTGCAACTT 22892 36 100.0 30 .................................... TTGCAATCCAAGGCTTCAAAATGGCTTGGA 22958 36 100.0 30 .................................... CGCCTGACCTAATATAACCATATGGAAAAA 23024 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.5 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAGCGGTTGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCTGGAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //