Array 1 3484-2540 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLYP01000356.1 Lactobacillus helveticus strain W-6 sequence356, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3483 29 96.6 32 ............................C ACGGTACCTTTTGGGACTTCTTGGCTGGTGTC 3422 29 96.6 32 ............................C TTCTGACGGCGTAACTGAATCTCAACAAATCA 3361 29 100.0 32 ............................. AGTGATTGCCGTGTAGTTCTTATGACGATTGC 3300 29 100.0 32 ............................. ATTAACCATTAAATCAACGCTGTGTGTTCCTC 3239 29 96.6 32 ............................C TTAGAGTTAGTCATAGTCCATGTAAACCGCGA 3178 29 100.0 32 ............................. CTGTTGTACTTTTCGTCTAAAATAAAGTCATA 3117 29 96.6 32 ............................C TAGAATTGATGGATATAGTCAATACACTATTG 3056 29 100.0 32 ............................. ATGAACTTTTACATCTTGTGATATCTCTTTTA 2995 29 100.0 32 ............................. AGGCAGCTTGATAAAGTCATCAAGGGTCATAG 2934 29 100.0 32 ............................. GCTTTTAGTCACCTCCTTCAAAGCTCAGCAAA 2873 29 100.0 32 ............................. TGCAATAGCAACACCGGCCGCTTGGTCTAAAA 2812 29 100.0 32 ............................. CTACTGATCCGACTGGTTTCGCCAATTTGGTT 2751 29 100.0 32 ............................. CACTGATATAGACATCGCACGCATGGCCCATT 2690 29 100.0 32 ............................. TTGATTGCTTCATCGAAGTATTGTTTTTGCAA 2629 29 100.0 32 ............................. CAGCCGGACTTGAAGCAGCGCGTAATTGATCA 2568 29 72.4 0 .....................CAACCAAA | ========== ====== ====== ====== ============================= ================================ ================== 16 29 97.4 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : ATATATATCTAAAAGTAAATGTGAAAGATTTTATCGACTAATTAAAACTGATTATGAAATTCCAACGCATATTTCTAAAATTACGCAATTAACATCAGAGAAATTGAATCAAAGTGGTATTGAATTATTTGATGCGCTTGAAGACTTAAAGAAGTTTTTAGCTGATAGATTAATAGTAGGTTATAATTTAAATTTTGATATTAATTTCCTGAATCGTGACTATCAAAAATATAATAATTCCCATATCTTGAATAATTTAAAGGATATATTGCCAATAATTAAGAATAAAAATAAGTTTATTGATAATTATAAATTAAATACAGTTCTTAAAAATTATGGTATAAAAAATGCTGAACCTCATAATGCTTTGTCAGATGCGTGTGCCACATTGGATTTAATTATTAAGCTGTTAGAGCAAGGCAGCTTTTAAAGATAATGAAAGTGATTAAAAATAGAGATTTAGTATTTTGAAAACGGCGATAGAATGGGATTTATTTACT # Right flank : AACAGGACTAACTCAACCAGATTAGTCCTGTTTTTCATCTATATTAAAATATTTCTTCGCTGCATCGCTCATGCGATCAGGCGTCCAGACCGGATACCATACAAATTCAACATCAACATTTTTTACTTCCGGCACTTTTTTAACTGCCTGAGTAATACTATCAATTAGGTAGCCAGTTAACGGACAAGCAGGGGTAGTCAAAGTCATATTGATTAAACAGATTCCATCTTTGTCCAGATCGATTTCATAAATTAAACCTAGATTGACTACATCAACATTCAATTCAGGATCGATAACTGTCGCCAATTGATTGATGATATCGTTTTTAATTGTTTCACCGTCACGCATTTTATCACGCATCCTTGCCAAAAATTTTAGCTTTGATTGCTTGGCCGGTTGGGGTACCAGCTAAGCCGCCGATTCCGGTCTCACGCAGGGATGCTGGCATTTGATGACCAACTTTTTTCATAGCATCGATACATTCGTCGGCTGGGATCACG # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 13609-13275 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLYP01000356.1 Lactobacillus helveticus strain W-6 sequence356, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13608 29 96.6 32 ............................C TGTCTATAGATCTTAGTAGTGGGCTTTAATGT 13547 29 96.6 32 ....................A........ ATGCTCGGCTATACTATCAAGCAAGCTGTATC 13486 29 100.0 32 ............................. CTGGTAAATCTAGTGAAGCTTATAAGCGTCAG 13425 29 96.6 32 ............................C TCGTGTGATCTGCGGACCTTTTGCACCTAATA 13364 29 100.0 32 ............................. ACAAGTAAGGAATATTGACCGAATCTTTAACT 13303 29 93.1 0 ...........................TA | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.1 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : TTAACTTTGGCAATCAATGATTTCTTAGCACTGATGTACTTGCCGTTGCTTAATTTTAAGACTGGAGCACTATCAGTGGGAGTGACCAACTTGCTAGTTAAGTAGTGATATCCCTTTTTAGCATGATGATCAACTTGTGTTAAAGCAGCATCCTTATAGATAGTAGCATTGTGCTTTAAGCGAATGATCTTAGGATTAGATGAGAGATAATCGCTCTTATTGAAAGCTGGAGCTTTCTTTTCTGTAGTAGAACTTTGAGACTGATTAGAGTTCTGTACTACTTGAGTATTTGATTGAGCATCGCTAACAGCATCGGCTTGAACGTGATTAGTAGAACAATTCCTGCACCGAGCAAAACTGCCACGATAGCTGTGTTCCACTTTGTCTTTTTCAACATATATTTTCTCCTCCATAATTTTTGGGAATTCATTGGTTATTTTACTCGTGTTTTAGAAGTTTTTAAATTAGGAAGGAAGAATTTAAAATGAGTAGAAGATATA # Right flank : AAAGCTTTCAAGTGCTATAAATAGTTCATATATGAAATAATATTTTACAAATTATGAGGAAATGAAAATGCAATTATCTAATAAGACTTTATCCTTATGGGGTAAGAAAAATGTTAATGATGACAATGAAAAAATGTGGTTACCATTAATTGCGCATTTAATTGATACAAAAAATGTGATCAATTGGCTATATAATCATTGGATCAATGATGGTCAAAGACATATTTTGCAACGGAATTTTGAAGATGAAGATATAGTTCAAAATTTAGTGAAGTTTTTGGGATATATACATGATATTGGAAAGGCAACACCTGCTTTTCAAATTAAACAGTCATATATCCATAATGAAGATTTAGATCAGAATTTAGTAGAAAAATTATTGCGAAATGGCTTTGATGGTCTAGATAATTCAAAAATTAAGAAAATTAATACAAGTAAGACGCCTCATGCATTAGCTGGAGAAGTTATTCTAGAAAACAACGGGTTAAATGAAAGTATAG # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //