Array 1 1097944-1096065 **** Predicted by CRISPRDetect 2.4 *** >NC_016023.1 Weizmannia coagulans 36D1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1097943 30 100.0 36 .............................. TTTGGCATAACCCATTGGTCTGTCTTCACTTGCCTA 1097877 30 100.0 35 .............................. ATTTTTACCCATGCACCGTTGCAAGGAACATTTAG 1097812 30 100.0 36 .............................. CATGGACAGGCGTTCAGAAAGCTCTGTCCGGTATTA 1097746 30 100.0 37 .............................. AGGGTGTAAACTGGGTTTTAAAACGGGTAGGTGCTAA 1097679 30 100.0 37 .............................. CTGCTACAGCGATGTATTGGCGTGGCGCAATCTGGCG 1097612 30 100.0 38 .............................. CGCTTGTCCTCGTCGACTTCCGTGAAATATCGTTTTAG 1097544 30 100.0 38 .............................. TACCTATAGCTTTTTATACCAAATCAAAAATGTGCACC 1097476 30 100.0 36 .............................. CTTTTTTTGCCACAGTATGGGCAAATTACCGTTTGC 1097410 30 100.0 36 .............................. ATATCCGGCCGCGATCAGATCCTTTGCCTCCTCGCC 1097344 30 100.0 37 .............................. CCCAGATACTGTACATTTAGTTGTAAAACGGTATAAA 1097277 30 100.0 37 .............................. AGGAGTGGTAGCCACGTACCAGTCAAACTGCATTTGT 1097210 30 100.0 36 .............................. AAAAATGACCAGTTATTAATTTTTTTGTGCTGTACC 1097144 30 100.0 35 .............................. ACCGCGTATAAATTGCTAGGCCTTTCCTCGAGTAT 1097079 30 100.0 35 .............................. GCATTTCCGCCATGGCCTGTTTTTCCGTGGCGTGC 1097014 30 100.0 37 .............................. AAGGCTTCTAAAAAAGATCCAATGCTAATTGCTCGTT 1096947 30 100.0 35 .............................. ATTTTTAATTGCGTTGTTGAGAGACCCAAAGCTAA 1096882 30 100.0 35 .............................. TGAAGCAGGCCGAGCGCTTTCGTGCGCTGCTGGGC 1096817 30 100.0 36 .............................. TCCGATATATTATCGACAATCACGCCGATCTCGCCG 1096751 30 100.0 36 .............................. TCCCCTACGCCTTTCATGCTATTTTGTAAGGCGCCC 1096685 30 100.0 35 .............................. CGAAAATGCAAAAACTGGAGATAATCAAAAAGCAA 1096620 30 100.0 35 .............................. TTAAAAAAGCTGGAGTAAGGCATATCCGCCTGCAC 1096555 30 100.0 35 .............................. ACCGCGTATAAATTGCTAGGCCTTTCCTCGAGTAT 1096490 30 100.0 35 .............................. CTCGCTGTGACATAGTAAGGCGTTGTTTTTGCCGT 1096425 30 100.0 35 .............................. TTCGTTTGAGTCTACTAGCTGGACGCGATATTTTT 1096360 30 100.0 38 .............................. GCGACTGTAAAACTAGAGTTGATACGATATAAACCGAA 1096292 30 100.0 37 .............................. ATCGCTTTGCTAAACCAAATCCTGGTTAGCTGTGGAT 1096225 30 100.0 36 .............................. GCAGTATTCCAGTCAGTAAACACGTTGGAAAATACC 1096159 30 100.0 35 .............................. AGACAAAGAGGGAGGCACAAATTGCCGCCGCCGAA 1096094 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 99.9 36 GTTAGTATTTTACCTATGAGGAATTGAAAC # Left flank : GATTACTACTTGATTTTCGGTTACTTTAAGCTTGCCGGCATTTGCCAGCAAATCTACTACCGTTACAAGCGCGGCCAGACACAAGACCGGCGTTTCGCCCATTTCGGCAACGTCGTCCGCAGCCTGATCCGGCACGCGGTGGAAGTGGCGGAGAGGGTTTAACGCAAGCGCTCCATAGCTGATTTAACGTAAAAGAAGGCGAATCTAGCATTTTCGCAGATGGATTCTTCTATAATATTGAAACAGCATTTACTGGCAAATCGGATACAAGCCAAAATCTGATTCGTTCAGTAAGCCCTAAATAAGATGCTCGTCAAAAATGTCGTCGACCTCCATTAGCGTAGAAAACCCGGGGGATCGACGACAAATTGTTAAAACGGGCAAGTCTTTGACACTATTGGTATTGCCTGGATTCCATTAGATGTTGAAGAGATTTTTTTGCGCAAGCAGGAAATTCCAGCGGTCATGGAGAAATGTTATAATATCAGTGAGTTTTTGGA # Right flank : ACACTCAATATAGCCAGTGGGAAGTTAATTTCTATTCTGAAAATATGTGCCGACTTGATTTTCATTCACCCGCTGGTGTCGCGTTCACTGCGGCACGGACTCCTAATTGAATAAGAAATAAGTCACTTTCACAGTCTATCCCGCTGAATCAAATTTAACGGCTTTCCGAAAGAAGTCTCCCATCCTCAAGGAATGTGAAGGTGCGAATCGCACCAATGAGTAGGTGGGAGATGAATTTCGGTTGGCTTTAGCCAAAGGTTTTGATATAAACAGTCTTAGATGGAATAAAGGGTTGATATATCAATGAAATTAGATAGTAATAATCATTCAGTATTCCTACTGCATTATCACCTTGTATTGGTTGTAAAATACCGTAGACAAGTATTCGATAGCGAAATATCTGATTTTGCAAAAGATATGTTCGCTGAGATTGGAAGTAAATAGGGCTTGCTGAACGAATCAAATTTGGTCAGATACAAGCCAAATTCCGATTATCAAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 2117433-2121795 **** Predicted by CRISPRDetect 2.4 *** >NC_016023.1 Weizmannia coagulans 36D1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2117433 30 100.0 39 .............................. TAGGTTACCCGCTGTCACAAACCGGATCCGGAGACAAGC 2117502 30 100.0 36 .............................. ATCGCGTCCGTGAGTTTGCCCCAGTATGCCGGGTTC 2117568 30 100.0 36 .............................. AAGTGATGATCGCGACACATCCAGATGCCGATCATA 2117634 30 100.0 36 .............................. AATGAGAAGATGGGAAGTACTTGCAATGCTAAACGG 2117700 30 100.0 37 .............................. CGGTGTCGCCTTCCACGTCCAGCGCTAAAAATTTTGC 2117767 30 100.0 37 .............................. TACCTCCCGGATTCAAATCCCTTTTTCTCGATCGCTG 2117834 30 100.0 36 .............................. CGAGTGTAAACAGTGTAGACAGTACTTCCGTCTGCT 2117900 30 100.0 35 .............................. TCTGACGGTCCGAGGGCTGCCCAACGGCACAAAGT 2117965 30 100.0 39 .............................. GGGCAAAAATTTCACGAAACCGCTTTTGCATATTTCCCC 2118034 30 100.0 39 .............................. GATTGTCTTCCAGAACCGCGTTTTCCCTCAATGTAGCCC 2118103 30 100.0 36 .............................. CCTGATACTGGCGCTGTATACCAAATAGTTTCGCCT 2118169 30 100.0 35 .............................. TCATTGAATATGATAAAATAAATGAATTGGATGTC 2118234 30 100.0 37 .............................. AAGTTGTTGGTATGCGTGACGGCGATGATGTAACGGG 2118301 30 100.0 37 .............................. ACACTAAACCGGTTAGCACGTCTACCACCAGTACAGT 2118368 30 100.0 38 .............................. CACCATGCTTTCATGACCAAAAGTTTTGCGGATGAACC 2118436 30 100.0 39 .............................. ACAGCATGACAGCTATCAATTCGCAAGCGATCAAAGAGC 2118505 30 100.0 35 .............................. AGCGACAACGAACACAATAAGTCTGTATCATATCC 2118570 30 100.0 36 .............................. ATTTTTAAACAGATCTGCTATCCCCGTGACCTGCTT 2118636 30 100.0 36 .............................. TTCTGCTTCAGTATCTACATATGTACCAATGTATAA 2118702 30 100.0 36 .............................. GCGTCTTGCTTTCGTTTCCATTCCACCATATTCGCG 2118768 30 100.0 35 .............................. TTTTGGGGTGTGAGGCTGGCTGGGGGTGTGGGGGC 2118833 30 100.0 37 .............................. GCGGTATGATGGATGGAGCAAGCCGACCCTCGGAGCT 2118900 30 100.0 38 .............................. TTTGACGGACTCGTCGCAATGGATCCGCCTTTTTTCGT 2118968 30 100.0 37 .............................. ACCAGGAACAGCTTGCTTTTGATTTGAATGTGTCCCC 2119035 30 100.0 35 .............................. CAAGTATTTAAAAATCCACAACTGAATACAGAACG 2119100 30 96.7 35 .G............................ ATTCTTCGATGTCCTCCCTTAGCTGGTCCATCCCA 2119165 30 100.0 35 .............................. CGGATATTGTAAAGGATGAACACACATATCATAAC 2119230 30 100.0 36 .............................. TGAGGAGGGGGCTGATATGGTGAACGTTTCCTTTGA 2119296 30 100.0 36 .............................. AAATACGGATAGGGTAACAAAAAAGGCGACCGCAAT 2119362 30 100.0 36 .............................. CGTAATCCCCGACTTTCAGCTTCGGCGCCGTGTATT 2119428 30 100.0 38 .............................. ATAGATTATGGTGTACCGGATGTACCGTTGGTAAAGGT 2119496 30 100.0 37 .............................. CGGAAAGCCGTTAAAATTCTGCAAACTGTGCCGCCAC 2119563 30 100.0 37 .............................. CTGTTCTTTTGGACTCTGTATATATTGGCCATGCTTT 2119630 30 100.0 35 .............................. GCCGGTATTTCGTTTGATCGCACCGGATATGCAAC 2119695 30 100.0 36 .............................. TCTGGCCCGAAAGCAATCTTCATTTTGACCACTTCT 2119761 30 100.0 36 .............................. TACAAAATGGAGGTAAATGAATATGGCAAGTATACA 2119827 30 100.0 38 .............................. ATCCGAGCCGTGATAAAATTGATACTCCCTTGCCAGTG 2119895 30 100.0 35 .............................. TAACAATTGAGCCGTTTGGTATTGATCTCGAACTA 2119960 30 100.0 37 .............................. AACGTAAATATCGCGCAGCTGGCGCTCAACAAGGCGC 2120027 30 100.0 36 .............................. TCGGTAGTGGTAAAAGTTATCACGCTGTCAGAGACG 2120093 30 100.0 37 .............................. TCGTATTTCACCTCGACATTAAACCGCGCTGGCTTTG 2120160 30 96.7 35 .............................A AAAATAAGCATCGCAGTACATGGCGAGATGGCCGA 2120225 30 100.0 38 .............................. TATAGCTGATGTCCGCATATAATTCATAGCTGTCGTCC 2120293 18 56.7 0 .................T------------ - Deletion [2120311] 2120309 29 96.7 36 -............................. CAGCAGTGTAAACAAAAAAAAAGAAGGAGCTGAAAA 2120375 30 100.0 38 .............................. TTATTTCTGTAAACCGGCTTTCCATTTCTTCGTACACT 2120443 30 100.0 35 .............................. TCGAAAAAGCAAGCGCAGGGCGTGCATGATGTCAT 2120508 30 100.0 35 .............................. AGCGTAAATCAAAATATTATTTAATGATCGTGTAC 2120573 30 100.0 38 .............................. ACAAGGGGCGCGACGGCGGCGAAGGGGAGCAGTCAGAA 2120641 30 100.0 35 .............................. ATGCGTATGGCGTACGAAGCAGGAAAAGCTGGCGA 2120706 30 100.0 37 .............................. CTTACATTCTGCTTTCTAGTAACCCACATGAGATTGC 2120773 30 100.0 37 .............................. CTGTCTGTGCTGCTTGTGCTGCATCTGCAGCTGTAGC 2120840 30 100.0 36 .............................. CGGGCATTGTGCCAAGCGTTAATGCCGACCAGTCCA 2120906 30 100.0 36 .............................. TGCAACGCCCCATGCTTTTGTAGCTCCCGCGGCTAT 2120972 30 100.0 35 .............................. CGGTAATGTGTACGCCCTCTACGTGTGGCATGCGC 2121037 30 100.0 38 .............................. CACGTAAATACATTCATGCTATAATGAAATCAAGATAA 2121105 30 100.0 37 .............................. CATCTATGCTATCTATGGTATAATAGAAGCATAAGGA 2121172 30 100.0 36 .............................. GTTAGCTATGGCTTCTCTTTCCGCTTCCTCCTCCGT 2121238 30 100.0 37 .............................. GGCTTTGACAGGGACATAATTCCTTAGATCGCTTGTA 2121305 30 100.0 35 .............................. CGGGCATTGTGCCAAGCGTTAATGCCGACCAGTCC 2121370 30 100.0 35 .............................. GAATACGACTTCGCATGTACTGCGTTTTCCATCGC 2121435 30 100.0 35 .............................. CGCTTAAATATACGTACTCCGCCAAGTGACGCAGG 2121500 30 100.0 36 .............................. CAATACATGGGCATGCCTAAAGGGAAGTTCCCAGTC 2121566 30 100.0 36 .............................. CGGGACTGGTCCATTGGAGCATATAACCACAATTAT 2121632 30 100.0 37 .............................. AAAGGGGTATGGGCCTACAAGAAATCCGGGTGTCAAG 2121699 30 100.0 37 .............................. GTACGCCCGGTACGCATCCAAACCTATTGGGGTTTCC 2121766 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 67 30 99.2 36 GTTTGTATTTTACCTATGAGGAATTGAAAC # Left flank : TTTGGCCGTTATTAAATAGGGCTTGCTGAATAAGCAAAAATCCTAGAGTTGTAAGGGTTCTGTCAGCTTTTGCTAAGCTTTAAATGCAAGGGTTTTTTGAAAAATGCAGGAAAAGTATTACACCTGAAAGCTGATTCATCGTAAAAGACGGCGGAATCTGGCATTTTCGCAGATGCATTTTTCTATAATATGGAGGCAGCGTTACAATTGCAACAGGACGAAGCCTCCTTCTATAATATTGAGGTAGCGTTTACTGGCAAATCGGATACAACCCAAAATCCGATTCGTTCAGTAAGCCCTAATAAGATACTCGTCAAAAATGTCGTCGACCCTCATTAGCGTAGAAAACCCGGGGGATCGACGACAAATTGTTAAAAACGGATAAGCCTTTGACACTATTGGTACGGCTGTATTCCATTGGATGTTAAAGAGATTTTTTTGAGAAAGCAGGAAAATCCCACAGTCATGGAGAAATGTTATAATATCAATCATTTTATGGG # Right flank : CTCGGTGGAATCATGGAATAACTGGCTGTAATCTTTGGCGTTTGTATTTTAGAGCCTCTGCCAAAATAAAAATATACCCTTGAGCGAGGCTCTGGAAAATTAATTATCCCGATTTTTTTGCCTTTTCATCCAGATTTTCAATTCATATAGAAGTAAAACGGTCATTTTCCTTCAAAAAAAGGGCATACGTATCCCGCCTTCACAAAATGGGTTTTTTTCACTACCCTTTGTGGAAAGGAAACGCTCATTTTACTTATTCACATATCCACCTGTGAATAACTTAATTTGCTCTTTGCAGCCGATTGCGTGTCCATCCACAATTGGCCTTTCCTGTCTGATGGTACGCCATATTTGCCATGATATGCATAGATATCATGCATCGATCTACATGAGCTTCAACTGCCTGTTTCCCACGCTTGTGAACACGACGGAGACTGTATCCGTCTTTTAGAATGCCAAAGATTCGTTCGATGATCGTTCTGGCACTATATAACACTTCA # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 2123872-2124703 **** Predicted by CRISPRDetect 2.4 *** >NC_016023.1 Weizmannia coagulans 36D1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2123872 30 76.7 37 CAAG.GC.C..................... ACCAACAAAATGCAGGCGGTCGAAACGGGGCAGCTGC 2123939 30 100.0 35 .............................. ATAAAACAAAAACAGTAAAGAAAATTGAGAAGCGT 2124004 30 100.0 36 .............................. AATAAGCTGCTGGAACACACGCTGAACATAAAGCGA 2124070 30 100.0 39 .............................. TCATAATAAGTGACGACGGGCATTGTCACGCCGTCAAGC 2124139 30 100.0 36 .............................. ATAAATGTATAATGTGTGCCATATTGATTAGTATGT 2124205 30 100.0 37 .............................. CAGCCTGTATATTCCTAGGATCACATACATAATCCCA 2124272 30 100.0 38 .............................. CGAGTTCGCGAAGTTCGGCCGTCGTTTTGGTGCTGGAT 2124340 30 100.0 38 .............................. GTCTTGGTTTTTGGGATGTCTGGCATGTCAAATGTACC 2124408 30 100.0 37 .............................. AGGAATACTCCAGCCTCGATGTGGTCATTGGTGCTTT 2124475 30 100.0 37 .............................. CATTATACCACCCCATATAAAATAAAGGGGTAGCGAC 2124542 30 100.0 35 .............................. AGGCGGGAGCGCCCCTCGGTCAAAAACTCATCTAA 2124607 30 100.0 37 .............................. AAAGGCCATCACCCTGGTATCCCCCTTTGGTACGCCC 2124674 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 98.2 37 GTTTGTATTTTACCTATGAGGAATTGAAAC # Left flank : AAATATAAAAGGGTGTAGTATTCTCGTTCAATCGGCTTAAAAATCTCCCATGGGAAACACATGGCTGGAATGACAAATGGTATATCGGCATAGTCTTGCCAATTGTGGGGAATCAAATTTTGTTGTATTGAAAAGTCTCTGGTTTGTGTTAGAATAGAAATAGTCATGAAATCACTCCCTGGATATTTGGTCGTACTTATATCTTAACAAAGGAGTGACTTTCATGGCTCTTTTTTTTCAAAAAAAATCATCCTTTTCCGTTTTACAATATTTACCACAGGAATGAGTAGCTTAATCTATTGAAACCCGCCTAAAACCGACCAAAGTGGAAAAATTTAGACACTTATAATAAATAAATTTACCCCATTAAAATCAAAAACTCACAATTTCTTTTTACATTTGTCATAATGTTCCTACAAACGTCTTTTTTCTTTAGTGGAATAAATCAACGACCTTTAATTGTCTGACTGCTTACAGTTTCAGGGGATATAGCATTTTGG # Right flank : CCTGTTGAGTGTGGAGCTGATCAACGACGCCGACTATAATGGACCCATAAAACTAGACACAAAATGAGGAGCTGTTAAAGTAGGTTTATGAGAAAAAGTTATACGCCTGAATTTAAAACTCAAGTCGTGCTAGAGGTCTTAAAAGAAGAAAAAACGATGAACGAAATTGCTTCTGCTCATGGAATCCATGTGAATCAAATTCGCCAATGGAGAAATGCTTTTCTTGAACAGATGCCAAAAGTCTTTGAAAAAGGCAACAAAAAAGTTGAAAAAATGAAAGCCGAGTATGAACAGACCATTGAAAGTCTCTATGCGGAAGTCGGCCGCCTAACCACGCAGTTGTCGTGGCTTAAAAAAAAATCTGGAATTAAGGAGTAGAGCAGAACGAGTTGAAATGGTCGACTGGGATGACGAAGCAAAACTGCCAATTTCCATCCAGGCCGATCTTTTGAGCCTGAACCGTTCAAGCCTGTACTACAAGCCAGTCGGGCCGTCTCCTG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.41 Confidence: HIGH] # Array family : NA // Array 4 2126172-2127007 **** Predicted by CRISPRDetect 2.4 *** >NC_016023.1 Weizmannia coagulans 36D1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2126172 30 100.0 36 .............................. GCATCTGCATCCGTTTTTGTTATCCTGGCTGCAATT 2126238 30 100.0 36 .............................. TATTCCAACCCGGTTAATCTATTCAGGCATGTATCC 2126304 30 100.0 37 .............................. TCGATAATGTCAAGGCTGGTATAGAAGAATTGCAAAA 2126371 30 96.7 38 ..............A............... AAGTATGCCGGAGATGTGGCGTGAAAAATCCATTTCGC 2126439 30 100.0 36 .............................. AATAAAGTTGAAATTTTACTGATTCGGTCACTATAT 2126505 30 100.0 39 .............................. CGCGTGTCGTCCGTATCGTCGGCGCATAAGCGGTCCAAA 2126574 30 100.0 35 .............................. GTTTCATATCCCATCCACCGCCCGTTTGCATATTA 2126639 30 100.0 39 .............................. TACGTTACATCCGGCAGCTCCAAATAATCCTCTGCCTTC 2126708 30 100.0 37 .............................. AGATATTTCTCAGCCGCGCTGCTTCCGTCCAGCTCCG 2126775 30 100.0 37 .............................. CGCCGTATTCTTCAGCTATTACTTTCAGCGTTTTCTT 2126842 30 96.7 38 .................A............ AGTCGGCATGACTGAAATAATTTAGGCAGATTTTCATT 2126910 30 93.3 38 .......C.........A............ CATTCCGGGCAAAGTTCGGAGAAATACCGGTCTGCCTT 2126978 30 93.3 0 .......C.................A.... | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 98.5 37 GTTTGTATTTTACCTATGAGGAATTGAAAC # Left flank : GGTGCTTGAGAACACGATTAAAATCAGCATGGACGGCAAAAAAAGAGCCCTTGACAATATCATTACCGAAAGGCTTTGGCGAACCATCAAGTATGAGGAAGTATATTTAAAAGAATACAATTCCCCTAGAGAAGCAAGGAAAGAGATTGGTAACTTTATACAATTCTATAATCACGAAAGACTCCATCAGGCCCTGGGCTATAAGACTCCTGCCTCCGTTTATGGCCTTTGAGTGATTCATCCTTCGGGTAGAGGATACTTCTCCGGGGGTGTTGTGTCAAGGGTTCGGCAAAGCCCTCGCTACACTCGCCCTTGACACAACACCCCCGGAGAAGGAAAAATAAAGCAGGATGAATCACTCCAAAAAATGTGAACTGTCCACTAACTGCCTCCAATGAGCATCCTCACGCTCTATTAGTCAGTATCTGTTTTTCAGATTCTGACCCACCTTAAAAATTTTAAATTTGTGTCTTGACGATGGGGTCCACCTTAGACATCGG # Right flank : CCTGTAATCCCGCGGGTTTATATTGCCGGCAACACCTAAGCCGACATCTCCGCCGGTAACAGCTACGACTGGCGGGGATGTTGGTTATTGTTCTGTTTTCAATCGGCTGCTGTGCTCTCTCCATGTTAAGAAAAAATCGGAAAGGGAAGCGAGCAAAAACACAAGATAAATGATTAAACCGGGTGTATCTGATGCATGCGAATCGGAGAGGACCCGCGTTTTCCACTTTTTTGGGAAACATCGTTTGGTGTACCGCATCGTACTCTTTTTGCTGCCAGAAGTGCTGCCGGTAATAATTCCGGTTCCTACTGTTCCATGCAGCCTTGCATGCAGCTGCCTGGCCAGAAAGAAAAGAGCCCAAGTCCCGCCTGCAGGAATAATAAAACAGAAGCAAGCAGCCCTGCCCAAAAAAGATTTTAAAGTTTTTCCCATTGAAGGCTTGCTGAGCGAACCAGACAAAGCTTTATCTCTGGTTCGCTCAGCCGCAAAACTGGTTGATG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //