Array 1 2792-2215 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHQ01000027.1 Methylobacterium platani strain PMB02 contig027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2791 28 100.0 33 ............................ CGCTACACGCTCAAGGATCGCGAGCTCTGGCGC 2730 28 100.0 33 ............................ CGACCGCATCGACCCGCCGATCGACTGGCGCGA 2669 28 100.0 33 ............................ TGGAATGGTGGGTTGATGACCATCAGCCGACCA 2608 28 100.0 33 ............................ CCCGAAGGGTGCCGAACCGCTCTCGCCGGCGGT 2547 28 100.0 33 ............................ CATATCGTATAGTTTCGAGATGTCGGCTTCGAT 2486 28 100.0 33 ............................ CGCCGAGAGCCTCACCGGGGCCGGCCAGCGCCG 2425 28 100.0 33 ............................ CGTCGAGGAGATCGCTCACACGCTCTCCGATGC 2364 28 100.0 33 ............................ CGCCATCGCTGCGGCTCACGCCCGGCAGAATGC 2303 28 96.4 33 ...................A........ GCCGCGGTTTACCGACCGCAAGTTCTATAAAAC 2242 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 10 28 99.6 33 GGCTCCCCCGCCTACGCGGGGATCGACC # Left flank : AGGCCGCGAAGGCGCACGAGAAGCGCCCCACCGACCCGATCGAGCGCCTGGCGCGCCGGACGGTCGCCGAGCGGCTTCGCCGCGACGGCGTGATCCCGGCCATGATCGACCGCATCAAGACCCTGTTCGAGGACGATGCGCGATGACGCATCGGTGCCCCCCATGCCCATGACCGTGGTGGTGACGCGGGACGTCGCCGACCGCTTCCGCGGCTTCCTGTCCTCCGTCATGCCGGAGGCTGCACCGGGCGTCTTCGTCGGCGCCGAACTCTCCAAGGGCGTTCGCGAGCGGATCTGGACCGTGCTGTCGGAGTGGTGGGTGGACATGCCGGGCGGCTCGATCGTGCTGCTCTGGAAGGATGACGCCGCGCCCGGGCGTCTCGGTCTCCGCACGCTCGGCCTACCCCCTCGAACCCTCGCGGACCTCGACGGCGCGCTTCTCGTCCGCCGGTAGCGACGATCTTTGACATCGTTAACAGTGCCAGCTACTTAGCAGGCAGA # Right flank : TTGCTGCGCGACCTCCGTGGCGCGGAACTCGATGGCTCCGGCGGGCGCGATCGCGCTGCTCTTCGCCGTCGAACGGCGCTCGAGCGCCCAGGACCTGGCGGCGCCGGCCGCGCGCGTCCACCGGGGCGAACGTCGGCTCTCGGCCGGCTGGGACCATGGCCGATGATCGCCCCCAGATCAACGCATCGCGCAGCTCGCCCGCCGCGAGGCGGAGCCGAAGGCCGAGCGTGCGGCGCTCGCGTACTGCGACGACTTCGCCTACCAGGGCGCGCAGATGCGCCGGGTGGACGCCGAGCTGCAGGTGATCCGGTGCCGCCGCTCCGCCATCCAGGCGGAGCAGGAGCGCGGGGTCTACCTGCCCTTGACGCGGGGAGCGGCGGCATGATGCCGGGACAGGCCGCGTTCTGGCTGATGCTGCAGCGGCAGCACTGGAACGGCATGGAGGTCCGGCTCGGCCGCGGAACCCTTGCCGCTCGGGAAGCCGATCGAGACGCTGCCTG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCCTACGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 118515-117041 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHQ01000039.1 Methylobacterium platani strain PMB02 contig039, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================== ================== 118514 29 100.0 32 ............................. CCCGGCAGCGCAGCGTAGGGCAGCGCGGCGTG 118453 29 100.0 32 ............................. TGGGCGCCGCCATCGCTTCTCACGAGCGCGCC 118392 29 96.6 74 ............................N NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 118289 29 93.1 32 NN........................... CTCGTCTGTGGATCCTAGGGGGGTTCCAGCCG 118228 29 100.0 32 ............................. CCGGCGAGCGGGCCGCTACCGGTGATGAGCGC 118167 29 100.0 32 ............................. GCATTGATGAGCTTATCCGGGCCGATGACCCC 118106 29 100.0 32 ............................. CTTGGACGCCGTGGCCCGGCCGGCAAGACCAC 118045 29 100.0 32 ............................. GAGCGGAAACGAAACGGGCCCGCCGGATGAGG 117984 29 100.0 32 ............................. AGACAGCGCCATGATCATCACGCATCTCCCGT 117923 29 100.0 32 ............................. CACGCCTCGCCGGGGATCGAGCAATTCCGCAA 117862 29 100.0 32 ............................. TCCCGCGTCCGGCCCGCTCGCCCTCTCGCCCC 117801 29 100.0 32 ............................. TTCGTGAGCGCCAACGACGTCATCCACCTCTA 117740 29 100.0 32 ............................. ACCTTGGGCGGCGCGCCGTCCGGGCAGCAGGA 117679 29 100.0 32 ............................. GCGCTGCAGGCCGCGATCGGCGTCACGGCCGA 117618 29 89.7 32 ..........................TGC GAAATCGTAGTGGGGCCCCTGACCTACGAGGA 117557 29 100.0 32 ............................. CGCCGCGAGGCCCGCGCGGTCGATGCCGGCTG 117496 29 96.6 32 ............................T TCGTTGTCGGCGCGGATCTCCGCGTCGAGCAC 117435 29 100.0 32 ............................. CACATGCTCGAGGAGCTCCTGTCGCATTCCGG 117374 29 96.6 32 ............................A CCCCTCTCGCGCGCCTTCGACCTCACGGTCGC 117313 29 100.0 32 ............................. CCACCGACGTGAACGGCGTGCAGATCTTCGGT 117252 29 96.6 32 ............................T TTTAGGAATTGCTGCGGACGGCATCTACCGGT 117191 29 100.0 32 ............................. CTGTTCGAATGAGCGCCCGGCGCGGCCTCCCC 117130 29 100.0 32 ............................. ATCCTCTACCGCCTGCGCGCCGACGGCCGCCG 117069 29 89.7 0 ........................GC..A | ========== ====== ====== ====== ============================= ========================================================================== ================== 24 29 98.3 34 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : ATGCCCAGCGACAGTAGTCGACGGACCGCGCCGCCTCGGTGCCGCCCCGCGTGACCCGCGCCTGATCGCTGATCGGGCTCGCCCGCGACCGGCGCCGATGCGGCCGGTCGAACGAGGTGAGCCATGACCCTGATGACGATGCGCGCCCGCTCCGGCGCCGCACCCCGCGACCGCAGCGTCGTGGTCGTTCTGCTTCTGATGCTGGCCCTGGTCTTCGGACCCGCCATCGGCCTCCACGTGGCCGTCAACCTGCTCGGCCCCGGACCGTCGCCGGACGGCCTCGCCGCGACCGCCACGGACGCGCCCAGGGGCGCCCGGGGCTGACCAAGGGCGCCCGGGGCTGACGGGGAACGGCCGCTTCCCGGGCCGCCGGAAACCCGCTACCCCTTGCCCGGACCCGATTTCCGAAGGGCCTCGCGCTCGTTCGGGAACGGAGCGGAAACACCGGTGCGCTCTTCGACATCGTGAAATGCGAGCCGGATCAACGGCTTCCCGGAAGA # Right flank : TAACCAAGCCGTTGTGAGCGGTCGGGTCCAAGCCGTCCCCGTGGCGTGGTGGGAGCAAATAGACCCCGCCCCACCACCTTCCCGCGCCCGCCGAAACCCGCTACCCCTCGGGCCCATGCCGACCCAATCCTCCTCCGCCGCCCCTGCCCCCGTCACCGTGACGGCCGGTGCCGTCCGCTTCGGCAACCACCTGCCGCTGAGCCTGATCGCCGGGCCCTGCGCCCTGGAGAGCCGGGACCACGCCCTCGAGGTCGCGGGCGCCCTCAAGGCGATGGCGGCCGCCCTCGGGATCGGCCTCGTCTTCAAGTCCTCGTTCGACAAGGCCAACCGCACCTCGGCCGGGTCGAGCCGCGGCCTCGGCCTCGCCCAGGCGCTGCCGATCTTCGCGGAGATCCGCGAATCCCTGGGCCTGCCGGTCGTCACCGACGTGCACGCGGCCGAGCACTGCGCCGCGGCGGCCGAGGCCGTCGACGTGCTGCAGATCCCGGCCTTCCTGTGCC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 16034-18034 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHQ01000055.1 Methylobacterium platani strain PMB02 contig055, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================== ================== 16034 29 100.0 32 ............................. CAGATGGTGAGGAACGCGGCGCCGGCATCGCC 16095 29 100.0 32 ............................. AACCCGGGCGAGGGCCGAACCGAGCTGCGCCA 16156 29 100.0 32 ............................. TCCTGACACGTACAATGAGTACATCAGAATAG 16217 29 100.0 32 ............................. CCTGAGGAGCACGCGATGCCGACGACCTTACC 16278 29 100.0 32 ............................. GACCCGGAAAGCTACTTCCGGTCCGTCAGCGA 16339 29 100.0 32 ............................. ACCTTCAGGCTGCAGTCACCCTGCACCACAAG 16400 29 100.0 32 ............................. GCGTTCCGGTGGTACTACAGCACCGAGTGCCC 16461 29 100.0 32 ............................. GCCTTGGCCTCCTCGTACTCATGATTGGCGAT 16522 29 100.0 32 ............................. TGTAACGAGTCCGGAATCCGATTCCGCTGGTG 16583 29 100.0 32 ............................. TACGCTCACGCGAGCCTTGATGATCTTCGGCA 16644 29 100.0 32 ............................. CCCGCTTCCTCGTCGCCCGCACGCCCGACGGG 16705 29 100.0 32 ............................. AGGTGGTGATCGGCATCCCGGCGGATGCCCCG 16766 29 100.0 32 ............................. CATTTGTCGACAAGATGGGAGGCGGCGATGTC 16827 29 100.0 32 ............................. GCCTCGCGCACCGCCATCTCCTGGATCTCGGC 16888 29 100.0 32 ............................. TTGTTAGTCGCCACACAGGGGCGACCCAAGCC 16949 29 100.0 32 ............................. CGGAACGACGTTGCTGCCCAACGGCTCGGCAA 17010 29 100.0 32 ............................. ACCAGGAGCGGAGTTTTGACAAGGCCGAAAGC 17071 29 100.0 32 ............................. GCCGAGGCGCGCTGCTGGATCGCGACGGTGTC 17132 29 100.0 32 ............................. CCCTATCCAGGTCCCACCTCCCGGACGCCGCG 17193 29 100.0 32 ............................. GCGCGGCCATTGACGCAGTAAAGCACCCGGGG 17254 29 100.0 32 ............................. AGCGCGGCGAACGCCTCCCGACCGTGTACGGT 17315 29 100.0 32 ............................. GTCCCTCTGGTCTGGTAGACCGTCACCGTACA 17376 29 100.0 32 ............................. CGGCCGGAGAGCGGCGCCAGCCCGACCACGCG 17437 29 100.0 32 ............................. ATCGAGGCGCCGGACGTCGCGTTGAGGGGCAC 17498 29 100.0 32 ............................. TTCGGCTGTCAGGTACGCAAGAGCCGAAGCGC 17559 29 100.0 32 ............................. TATGCCTTCCTGCGCGCCATCCGCTCAGCGAT 17620 29 100.0 32 ............................. CCGCTCACGCCACCGAGCGACACCGCGGCGTC 17681 29 100.0 32 ............................. TCCGGGCGTGGGTCGGCGACGCAGAGGGCGCC 17742 29 100.0 32 ............................. GTCTTGCGCACTATTGACGGATTTTTGTCCGC 17803 29 100.0 32 ............................. CCGCGCGAACGCGGCATCACGCGCGGCCTCGG 17864 29 96.6 52 ............................A CCCCTCGACAGGATGCGGGAGGGAGGTATGCTGCGCGGCACCGCTCGCTACG 17945 29 93.1 32 ............C......T......... ACAGTGCCGGTCACGGTGGCTGGTTCAGCGGC 18006 29 75.9 0 .A......T....C.......T....GAC | ========== ====== ====== ====== ============================= ==================================================== ================== 33 29 99.0 33 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : CCCTGGCCCGACGAGGGCACCGTGCCGACCCGCCTCGCCGAGGAGAGTCGCCTCCTGCGCCTCGCCCGGGTCGAGGACGGCCGGCTCGCGCCCTGGGCCGAGGCGGCCGACCGGCCCCTCGCCTGGGCCCTCTCCGAGGTCTCGGTCACGGTCCGCCGGCTGCGCGGCCACCTCGCCCCCGCCCCGTCCTGGCACGCCGCCGTCGCGGCGGCCCGCACCGGCTGGAGCCGCTTCGAGGACGACGTGATCCTCCTGCCCCTGGAGCCGCAGGCCGGCGGCACGTGGCGGGGCACGCTGGTGGCGGAGGATGGCGGGACGCTGACGCTGACCTACGGGCCGCGGCTCGGCCTCGTCCTCTGACGACCCTGGCGCCCGGCGCCGATCTGGGGCATCACCGGACCGGCTCCGGGCGCCGGATCGGGCGGCCGGAACGGAGCGGAAACGTCGGTGCGCTGTTTGACATCGTAAAAGGCGAGGCGGATCAATCGCTTCCAGAAGGA # Right flank : CAGTGCCGGTAACGGTATGACGCTTTCGCGGAACGTGGAAGGGTCGGTAGACTGACGGCGCGGCGCACCCGCCGCTCCGGTGCGGCCTTAGAGGGGAGTGTTCCATGTCCACGACGTGCAGTCTCAGTATTGCCCATAAGATCCGGATAGACATGTCGCGCTCGTCGCCGCAGCCGAACACGATCGTTCTGTCTCAATCGTCCAGGATCTCGATCAGGAGATAGCATTTCGGGGGCGAACCATCGCGCCGGCAGATGCGCCGGTCGTCCGCTCGATCGGTCCGGTCTATCGCCGCCCCCGCGAGCATGGCCTCCAGATGGAAAACAGTCTTCCGTCGGAGCGCGTCGGTCCGCCCTTGCCGTTACGCTCCGACCCGTGCAACCTTGGCCTGAGACGATCCAAGAACGATTCGCCCAGGGAGTGCCGTGGTCTCGCCCTTCTCCCTCCTGACCGAGGCCTGGATTCCCGTCCTGCGGGCGGACGGCGCGTTCGACACGATC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 24978-27019 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHQ01000055.1 Methylobacterium platani strain PMB02 contig055, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 24978 29 100.0 32 ............................. GTCGCCGAGGCGTTCCAGCAGGTCGTTTCCGA 25039 29 100.0 32 ............................. CGAGCGCATGAAGTCGCGCCGCTTGTTGATCT 25100 29 100.0 32 ............................. GTAGCGCCGCTTTACCGCCAGCGGTTCTGGGA 25161 29 100.0 32 ............................. ACAGCAGTCTTGCCGGGCTCCACCGTCGTACG 25222 29 100.0 32 ............................. GCCAGGGCGAGCCGGCGCATCACTTGAACACC 25283 29 100.0 32 ............................. CACTGTGATGTCGGCGCCCCGTACCTCTCAGG 25344 29 100.0 32 ............................. CTGATGGAGGCCGGCACCGGGTAGGGCATGCC 25405 29 100.0 32 ............................. TCGACGAAAAACTTCATGAGGTCGACTTTCGA 25466 29 100.0 32 ............................. TTCCAGGCCGAGACCTTCATCCTGCACGTCCC 25527 29 100.0 32 ............................. AGGCCGGCCTGCCCCTGACGTGCGCCGGGGAT 25588 29 100.0 32 ............................. ATGATCGGTATGAGATCGAATGGCTCGGCCAC 25649 29 100.0 32 ............................. CGGTGTGCGGTACATTTCGCAGTATTACGCCA 25710 29 100.0 32 ............................. GGCGGCGGCATTTCCATCGACAGCGCTATGTC 25771 29 100.0 32 ............................. ACGGAGTGACCGCCATGGCAAACGTCAGCCAT 25832 29 100.0 32 ............................. GCCAGACGGCCCAGGCGAGCACACCGAATATA 25893 29 100.0 32 ............................. GTGCCGCCGGAAATCTGAAACCCGTTTCCAGC 25954 29 100.0 32 ............................. GTAGCACCGATCTACCGCCGCAACTACTGGGA 26015 29 100.0 32 ............................. GTGCGCGTGTGCATCGGCCAGAAACCCGTAAC 26076 29 100.0 32 ............................. ATCGGGGCCTGCTGGATGTAGCTCTGGATCCG 26137 29 100.0 32 ............................. CCGTGCACGGTCACGACGAGACTGCCGTCGGG 26198 29 100.0 32 ............................. CCCTCATCGCCGGCATGGGCGCTCGCTTCGTG 26259 29 100.0 32 ............................. AGCGCTCCGGCGGTCGCCTCCTACGACCTCGT 26320 29 100.0 32 ............................. TTCGCGACCGGGCTCGCGAGCCAGGATTACGG 26381 29 100.0 32 ............................. ATCGAGGCTGGCCGCCAGACCGACGATTGGGA 26442 29 100.0 32 ............................. CACATGCAGTCCCTTACCGAGGACCAGACCAA 26503 29 100.0 32 ............................. GCGCTCCGCAACACGTCGGTGCTCCGGGCCGT 26564 29 100.0 32 ............................. ATCGACGGGCACGGCAGCGACCAGTCGATGAT 26625 29 100.0 32 ............................. TCAGCTCCGCCGATTATCGAGAGCAATTCGAC 26686 29 100.0 32 ............................. ACCTGCAGCGCCGGCATGGACGACAGCAGGGG 26747 29 100.0 32 ............................. GCCGTGTCCTACGAGGTCGACCTCGGGCACCT 26808 29 100.0 32 ............................. CCGTTCGAGACGATCGCGAACCGAGCGATCGT 26869 29 100.0 32 ............................. GTGCCAGTTCCAGATCAGCGGGGCGTTGGGCT 26930 29 100.0 32 ............................. CCCCGCTACGGGCGGTTCGCCGGGCCGATGAC 26991 29 75.9 0 ...........CCA...A....C.G...T | ========== ====== ====== ====== ============================= ================================ ================== 34 29 99.3 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : CATCGCGGATGAGGGTATCGCGCGGATGATGGTCGTGGTGGTCGAGAACGCGCCGCCGCGCCTGCGCGGCCGCCTCGCGGTCTGGCTCGTCGAGGTGCGGGCGGGCGTCTATGTCGGCCAGTATTCCCGCCGCACCCGCGAGCGGATCTGGGCCGAGGTCCAGGCCGCCATCGGCGACGGCAACGGCGTCATCGCCTGGACCGCCCAGACCGATATCGGCTACGCCTTCGATACCTGCGGCCGGAACCGCCGCATGCCGGTCGACCTCGACGGCCTCCCCCTGGTCGCCTTCCACCCCGACGAGACGCCGCTCTGACCGGCTCCGGAACGGAGCGGAAACGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCAGGCGCGGGGATGAACCGACCGAGGCCTGATTGGCGGCGCCGACCGCGAC # Right flank : TTGCCAGCCGCTTCGCCCCCCTGCTAGACCTCCGCCCGCGAGACTCGATCTAACCAATTGATTTCATTGACGATGCCGAGGCCGGTGCGCGCCGGTGCCCGGCATCGGGAGGCGCGAGGACCGGTGACAGCCCAGACCCCCCTACCGGCGCCGGCCCCCGTCGCGCCCCTGCGCGCGTCGCTGCGGCTCGGGCGCGGGCGCGTGGTGACGCGGGACTTCGCCCGCCTCCGGCTCGACTTCGGGGTCGAGGGCCTGAGCCTCGACGTGGCGGATCTCGGGCTCGGCGGGCGCTGGGTCTCCATCGCCTTCAAGGACGAGAACCACGGCGCCTTCTGCCGGGTCGAGCTCACGGCGGTCGCGGACGGGGCGGAGGGCACCAGCCTGTCGGAGCGCGCCTTCGGGCACGGGCGCTTCACCTGGCTCGGGCGGCTGCCGGCCGGCACCCGGTCGCTGCGGCTGACGCCGATGCTCGGCGAGCCGGGCCTTGCCATCGCCGAGTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //