Array 1 1738856-1738400 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068157.1 Corynebacterium striatum strain FDAARGOS_1116 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1738855 29 100.0 32 ............................. CGAGTTAAGGTGCCGGGCGCGTTCGTCGCCCT 1738794 29 96.6 32 ............................A CGGGGTGACCTCAATAATGGCGCGCTGAGTAG 1738733 29 100.0 32 ............................. ATCGCCAAGGTAGTCGCCGTATCATCGATAGA 1738672 29 100.0 32 ............................. GATTTGTAGCCATACCGTAAGGTCACCCCAAT 1738611 29 100.0 32 ............................. TTCTCCTGGGAGTGCTTGGGTCTTCCGACTTT 1738550 29 100.0 32 ............................. CATCATTATCACCCTGGCGCAATTCCTCGCCA 1738489 29 100.0 32 ............................. GCTATCGGCATTTTGGCTGATTCCTTCCGTCC 1738428 29 93.1 0 ................T...........T | ========== ====== ====== ====== ============================= ================================ ================== 8 29 98.7 32 CTCTTCTCCGCGCACGCGGAGGTATTTCC # Left flank : CCGTCAAGCGGAATCGATACGTCAACCTCAAGGCCCCGAATAAGCAGGTCAACCACACCCTAGCCAACAAGCACCTAACCCTGGCCGGGATTAAAGGATACGAGACCTCACGCACAGACTTAAAACCCCAGGAAGTCATCGGTGCCTACCGGCGCCTGTTCACGATCGAGAAATCGTTCCGAATGGCGAAACCAGACCTGAAAGCCCGACCGATTTATCACCGTAAAGAAGACTCCATCCACGCACACCTAACCATTGTGATGGCCGCGATGGCCACAGGCCACGTGTTGGAACAAGCCTCGGGCCTGTCGTTGAAGCGATTAGTGCGAACCCTGAAGAAATACCGGACGTTTACCGTCGAAATCGCAGGCCATACCCTCCATGCACAAACCGACCTGCCCGCTGACATCCGCGAACTCACCGAAAAGCTGCCCCAACCGTCTGACTAAATTGAGCCAAGTCAGGTCCATTGTTAAGCCGGTGTTTGATGCGTTTATGCA # Right flank : TACGCCGTTGTCCATTGCGCACACAACAAAGATGGGTAACTTTAGAGACGTGAAAAAGACACTCGCATCCCTCATCCTCATCGCCCCGCTCATGCTCACAGCGTGTGCCACCAACGCCCCAGCAGAGCTTTCAAAGCCTCAAAAGCTCAACAAATGGATTGAGGACGCAGGCCACGAATGCGCAAGCTGGAAAGAAGTATCAAAGACCCAGTCCAACTGCTATCTAAAAGGCGGCGATGCACTGACTGTCCATTTGGATGACGATCCGGCATCGGCTCTCGAATGGTACTTCGAAGACGGTGGCTCAACTGTTGGTGGCGTAAAAGGCAACAATTGGTTCATCCCGTGCGACGCTTCGATGATGAATACGTGCGAAGATATTGCATCAGTTGCCGAGGTGCACTATTTGCCAAATCCTGATTACCTAAAGTAGGAGTTGCGTATGCCGAAGCGTGCCCAGATGCGCTGCTCTTTTTTCCGCGCACGCGGAGGTATTTCGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 1740598-1743921 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068157.1 Corynebacterium striatum strain FDAARGOS_1116 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1740598 29 100.0 32 ............................. TTACCATTGACGAACTTTACAAAATTCTCTTG 1740659 29 100.0 32 ............................. ATACCGTCCAGCAGCTTCGCCACCGAGAAGTC 1740720 29 100.0 32 ............................. TCTACGCCTCGAAATCAGCAGTTTGACGCCCC 1740781 29 100.0 32 ............................. CTTGCCATTAGCGTCGTAGACCGTGAGGCCCA 1740842 29 100.0 32 ............................. GAGTACTGCAACCGGCTAAATAATGCTGAAAT 1740903 29 100.0 32 ............................. CCTCACGATACACAAGCAGCCGGGAGAGTATG 1740964 29 100.0 32 ............................. CCGGTATTCCAGGTGAAAGTGGCCCTGGAAGC 1741025 29 100.0 32 ............................. CGCCTGGACCTGGCGGACTGGCCCCGTGGCGA 1741086 29 100.0 32 ............................. CCACCGAGGGGCTGCTCAAGGCTGTCGCTCTC 1741147 29 100.0 32 ............................. GAAGTCGCCACTGATGACGAGATTAAGGATTT 1741208 29 100.0 32 ............................. GCTAAAGGCTCCTGGACTGGCGTTATTGCGGT 1741269 29 100.0 32 ............................. TATTTATCTAGCTACCGTCGAAACTGGGAATG 1741330 29 100.0 32 ............................. CAGGCTAAGTGCCTAGGCATGGACCCTCACCT 1741391 29 100.0 32 ............................. ACGTCCGGTGCCGACTCGTCGACAGACTTAGC 1741452 29 100.0 32 ............................. AGCAAATCGGATGAGGTGGCCGCATGCTCTAT 1741513 29 100.0 32 ............................. CCCCGCCAAGCTGGCAAGACTTACGGTTTTAT 1741574 29 100.0 32 ............................. CCCGGCTGGCTTACTCGCACCGATGGGCCGGT 1741635 29 100.0 32 ............................. CCGTGGCCGTGAAGTCTCCCCGGAATCAATTT 1741696 29 100.0 32 ............................. GCCTGGTCAGCAAACGCTGTTAGGGCGTTGTA 1741757 29 100.0 32 ............................. GGGTTGAAGCCCCAGCAGGCTCTACAGCAAGT 1741818 29 100.0 32 ............................. TGGTGCCACCCGGCGTGGCCGTGGAATTCGAC 1741879 29 100.0 31 ............................. CGGTGTTTTGCACCAGGGTGGGTAGGCCCTT 1741939 29 100.0 32 ............................. CGCTGAGGAAGCCTTGGCTAAGGCTCGTGAGT 1742000 29 96.6 32 C............................ GCGGCCGCAACCTCCGGCTTATTCGGGTCGCC 1742061 29 100.0 32 ............................. CCATTCATGCATGTGTGTACTCCTTCCATTAA 1742122 29 100.0 32 ............................. CGCCTTCTGCGCATACTCATCCTGTTGGGGAT 1742183 29 100.0 32 ............................. CCTTGTGTACTGCACTTTGCCCCCTTTTGTGG 1742244 29 100.0 33 ............................. CGGCACCATCCAGGAATCCGGCATTCTCGCATG 1742306 29 100.0 32 ............................. GGTGGGCGGTCTTAAACGCCTTCGAGTCGAAA 1742367 29 100.0 32 ............................. TCTCTACCGTGGCATCCCACGCGCTGGAAACA 1742428 29 100.0 32 ............................. TGGCGGTACCACGCTCCACGAACTCGGAGGTA 1742489 29 100.0 32 ............................. TTGGCTGATTTGGGAGCGACCACCGGCGCCGT 1742550 29 100.0 32 ............................. GCCAGCGTCGTTAGCACCAATGATATGGACCT 1742611 29 100.0 32 ............................. CACGCTTCCTGTAACTCAAGCCGTGGCGCTAT 1742672 29 100.0 32 ............................. AACCCAGAGTTGATGCTGAAGAACCGTGCCGT 1742733 29 100.0 32 ............................. AACCCAGAGTTGATGCTGAAGAACCGTGCCGT 1742794 29 100.0 32 ............................. CACGTTGACCACATTCGTGAAGCGAAGCGCGA 1742855 29 100.0 32 ............................. AGCGCGTGGAGATGCCCCGATACGTCCATTTA 1742916 29 100.0 33 ............................. CCGGTAGCTCACGATGTAAAGCCGGGCACGGTG 1742978 29 100.0 32 ............................. GCAGCAGCCAATCTGCCCAAAGCCCCGGATCA 1743039 29 100.0 32 ............................. TAATCTTGCCGAAAACAGCAGAGACCTTTTCC 1743100 29 100.0 32 ............................. TCGAGCATGTCTTTAATGACTTCTGTGGTGGT 1743161 29 100.0 32 ............................. CTAGCGCCCTTGATACGCGGGCTAATGGCCGC 1743222 29 100.0 32 ............................. TACAACGGCAGATTGAAGATACCGCTAGTGGC 1743283 29 100.0 32 ............................. AGCAGTGCCCACGTATTGTGCGCGCCGGGGCT 1743344 29 100.0 32 ............................. CTTGTGTGTGGAGCGCACAATGCGGCCGTTGT 1743405 29 100.0 32 ............................. CACAAGAAAAAGGCCCGAAAAGCAAATGGTGA 1743466 29 100.0 32 ............................. GTGATTCTTGGGCAGTCGCACATTGATACAAC 1743527 29 100.0 32 ............................. CTGGCGCTATCGGATACTTCATCACCGCCCTA 1743588 29 100.0 32 ............................. AACAAGCAGCACCACAAACCCCCACTCTGCCC 1743649 29 100.0 32 ............................. CCCCATATATGGCGGTGGAGACTATGAGCACC 1743710 29 100.0 32 ............................. GAGCGAGCCAGTGAGATGAGAGCTTCGTCCTG 1743771 29 100.0 32 ............................. GCATATAACGACCGCGCCACTAGGAATGTGTA 1743832 29 96.6 32 A............................ TGTTGTGGGCTGGTCCCCATTGCTGTACCTGG 1743893 29 96.6 0 T............................ | ========== ====== ====== ====== ============================= ================================= ================== 55 29 99.8 32 GGAAATACCTCCGCGTGCGCGGAGAAGAG # Left flank : CAGGTTGAAAAACACCTCGTCCTTGCCGCTTGCCGTATCCAGGCCAAGGAGTTGGAAGGCCCCGCGAATCGCGTCCAGGAGAAGACCTGCGCGTTCACCGGATACCGTGACGGGATTATCAACCGTGCCTGTTCCAGACACAGCAACCGCAGAAGGCAACACTTTGAGGTCAAGTGAAATTTGCTCGCCATCGACAAGCCGCTGAGCCTTGACCATCAGCGCTGCGAGATCGTGGTCGGTATGGGCGGAGCCGACGTGTTCGATTTCAGGTTTGCGGTTGCGGTACCGCCAGATGATTTGAACAGCGGTCGCACCCGACGCCGTCGGGACCCGGCGGATACTCGGTGACATATTCAACAGCCTACCGGCACCCCCACCGCTACCCGCTTAGTCAGACAAAACCGGCACTCTGATACCCAACCCCACAGGCAGAAACGTCAATATGAACTACAACACACCAAAATGAGCCAAGTCAGGTTTCATGATGTTTCCTCTCAATG # Right flank : GACTTCCTGAACAGCAACTTTAGTTCGTCTCGGTGCGGTTTTGCGTATGTTCTCGCGAAAACGTGCACGCAAGTAAAAGTCCGTCCATGTCAATGATTGTACGGCGTCGCGGTCCCATAGTGTTGACTGCAAAGCCCTGTTCGCGGGTCCGGTCCTCGTTGATCATGGTTAGGCTGCCGTCGGCGATGGCATTGGAAAGCCGTCGCCACAGGTTATCGCGGACGCGACGGGAAACGTTTCCTACATAAACACCGGCATCTACTTCCGAAAGGAAACGCGAAAGGTAGCCATGCATGTGGTCCGGGAGGCTGGTGGTTGTGATTACAAGAAACATTCAGCGCCGTCCATATTGTGTATGTCCGGCGACTTCATCGCCGCGCCCAGAGACGAGTCGATCGTCATCACGTGAAGGTAAGTGGGGCGTGAGTACCTCTGTGAGAACTTCCAGCATGTCGACGAGTAAGTTCTTCCGATGGATCTCTCGGCGTAGTTGCTTCCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAATACCTCCGCGTGCGCGGAGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //