Array 1 80837-84233 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFJLZ010000001.1 Streptococcus oralis subsp. oralis strain SN63707 NODE_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 80837 36 100.0 30 .................................... CTTTAACTCAGTGGAATTTGATGACGCCGA 80903 36 100.0 30 .................................... AAGAAACGGGCAAAGTAATCGACCAAGAGC 80969 36 100.0 30 .................................... TTAGTACAGAAAGCTTCAAGTTTGCTATAG 81035 36 100.0 29 .................................... CAATCTTGCAGCAGCAGAACGTGTTGCTC 81100 36 100.0 30 .................................... GTAAATGATGCGGTAATATTCATCATTTAA 81166 36 100.0 30 .................................... GTACCTTCAAATTTCTCAGGTCCTGTGATA 81232 36 100.0 29 .................................... CTAACAAGACTGTTACCGATGGTGTAGAA 81297 36 100.0 30 .................................... AATATCATATATAGATAAATAATTTATTTT 81363 36 100.0 30 .................................... TTTGCCATAACGACCTCCTACAGTCTAAAC 81429 36 100.0 30 .................................... ATATTGAATCTTTAGAACTTAATAAAGCTA 81495 36 100.0 30 .................................... AATTTTCGGAGCAAAAGCGTAGCGAGAGCG 81561 36 100.0 30 .................................... GAATTTTATTAGCAGGAAATTTAGGTTACT 81627 36 100.0 30 .................................... TTTTGAAGAGCCTATCACAGCACTGGATAT 81693 36 100.0 30 .................................... ATAAACAAGGTATTTTTACTTATGATATTC 81759 36 100.0 29 .................................... TGCTAAGAATCCAGATCCATCACTTGAAA 81824 36 100.0 30 .................................... AGCTGGTTGAAAATATCACTGAAGCAGAGA 81890 36 100.0 30 .................................... TAAAAAATGGATGGGTTCATCATCCAGAGT 81956 36 100.0 30 .................................... ACTGACCTTATATTGTGATCGTCAAGGTGG 82022 36 100.0 30 .................................... TTAACTAAAAAAATAAGAAAGGGTAGGCAG 82088 36 100.0 29 .................................... TATGTTAGATGCTTTAGTAGAGTATCATG 82153 36 100.0 30 .................................... TCAAGCTGGAAACAAATTGACGGATGTATA 82219 36 100.0 30 .................................... AATGTACCAGAAGAATTTTTCCTCTCAGCG 82285 36 100.0 30 .................................... TCTGACTATATCCATCTTGGCCGAGAACTT 82351 36 100.0 30 .................................... CTAAAGGATTTTGGAAGTGTCGCGAATGGT 82417 36 100.0 29 .................................... CGTGGCTACCAAGTACGGTTTGATCGCTA 82482 36 100.0 30 .................................... ATCTTCCACCTCCTCTAAATAATCTTACCG 82548 36 100.0 30 .................................... TAGAGAGCACTATGAGGACAATATCCACTG 82614 36 100.0 30 .................................... GGCATGACTGACTCACCTTACATCCGACAG 82680 36 100.0 30 .................................... TACAAACTCATCAAACTTGACCCAACATTT 82746 36 100.0 30 .................................... CAAATTCAATTAAAAATAACACAGGAAAAG 82812 36 100.0 30 .................................... GTAGCCCAATTACCACTCACATTGTAAGAG 82878 36 100.0 30 .................................... CTTTGTGCCACGTACCCTATCATATCGTCA 82944 36 100.0 30 .................................... TGCAAGCTATTGAGTCACTCGATGATCCAG 83010 36 100.0 30 .................................... GGTTGCTGATATGCCTCTCATATCCAGCTA 83076 36 100.0 30 .................................... GTCATCCGGTCAACAGCCTACCGTGAGCTA 83142 36 100.0 30 .................................... TCCTCAATCTATATTTCTCTCAAATACTCG 83208 36 100.0 30 .................................... AATGTGTCAGCTCGTTGACAAGGGGAATAT 83274 36 100.0 30 .................................... GCGCACTGGGCTTGTGCTACGACCAAGCCT 83340 36 100.0 30 .................................... ACGCAGGTGCTGAGATATTCGGTAAGGTCG 83406 36 100.0 30 .................................... ATTACATAAATGCTTATCATGATTATGATT 83472 36 100.0 30 .................................... ATAAGCTGGATTGTTGGCATTGTTATATTC 83538 36 100.0 30 .................................... TGAACGGAGTGAATACTTTTGGAATTGCTT 83604 36 100.0 30 .................................... AAAGGGTTGTTTTCTTATACTCATTTTATC 83670 36 100.0 30 .................................... CTTCTCCCACAAAGCATCTGAGGTCGGAAA 83736 36 100.0 30 .................................... TGATGGACGAGACCATCCCTGCCAATCTCT 83802 36 100.0 30 .................................... AAGTTCACTTCCTCAAACTCGGTTTCGCTT 83868 36 100.0 30 .................................... AAATCAGCAGTCTAACAATTAAGTTTCTTA 83934 36 100.0 30 .................................... TGTTTCCATAAAATTCTCTTTGTTCTGGCC 84000 36 100.0 30 .................................... TACAACAAGACAAAGGACGTAGGGACATTG 84066 36 100.0 30 .................................... TAACACGAGAGTTAAATAATTGCTTTGGTT 84132 36 100.0 30 .................................... TGGTGACACTACAATCAGCAGATGGGTCAC 84198 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 52 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : AAAAAAATTCTGTATTGGATCAATCAATCCTATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGAGATTTAAGGCTTTATAATGTTTTTGAGGGAACAAAAATCAAAATTGACGAATTTGAGGTTTTTGTACTCTCAAGATTTAAGTAACTGTACAACTCGCACATTATGTGTGGGGTTATACAACAGGTTTTTGTACTCTCAAGATTTAAGTAACTGTACAACTTTATCGAAGATCGACCAGATATCCAAACTGTTTTTGTACTCTCAAGATTTAAGTAACTGTACAACATAATATGTTGGAAGTTAAAACAGACTTTTGTTTTTGTACTCTCAAGATTTAAGTAACTGTACAACAAGAAGTTAAGGAAGTACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCTTAATGAACACTTTA # Right flank : CAGTCAAGCGATTTTCAACTTGTTCCTTATTTCTCTCTGTCTGCAGGGGGCAGTAATTCAATCAAAAAGCACTGAATGATCAGTGTTTTTTTGTCTTAAAATAGAAACCATTTCAGATGAAAATGGAGGTGTGGTATAATAGGAGAAAGTATCAGTGCTTATTTGAAGGGGAGTTTCTCTCCTTATTATGAGTATTAGGATTTAGTTTTTTGAGAAAAATAATGATGTTTGAGTAAAGAAGGAAATGGAATGAAAATTTCTGGAACAAGCGGTAACATTACTTTTGACTATGAAAATGGCTATGTTTTAAAAGCAGAGGGAGAGTTGTTGACTGGTGGTAGCTTTATTGTATATAGGTCAAGCATACAGAATTGGGAGCCACCTTACAATCACATTCTTATCACACAGAACGAGATAGATAAACTTGTCGAGGAAGTGAACTCCATGATGACGGAGCAAACAATTCAGATCGAGTTTATCTGAGATAGAGTAGGAGAAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //