Array 1 3927891-3926703 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP071050.1 Escherichia coli O1:HNT strain DR162-CEF chromosome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
   3927890	    29	 100.0	    32	.............................	GTGACCATAAGGGCATTTCATACTGCCTTGCT	
   3927829	    29	 100.0	    32	.............................	GTGAACGTGACAACGCCCGCGACAGAAACGTC	
   3927768	    29	 100.0	    32	.............................	GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC	
   3927707	    29	 100.0	    32	.............................	AAATTAATTTCGAAACGGGCGTTGATGGTGAA	
   3927646	    29	 100.0	    32	.............................	CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG	
   3927585	    29	 100.0	    32	.............................	CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG	
   3927524	    29	 100.0	    32	.............................	GGGTTCTATTTCCTCGGGATTTGCCGACACGC	
   3927463	    29	 100.0	    32	.............................	GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG	
   3927402	    29	 100.0	    32	.............................	GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA	
   3927341	    29	 100.0	    32	.............................	AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG	
   3927280	    29	 100.0	    32	.............................	TTGGTATTAACGGGAATGTAGTCACTCCAGGA	
   3927219	    29	 100.0	    32	.............................	ACGACTGAATCCGGCGAGGCTATCAACTGGCC	
   3927158	    29	 100.0	    32	.............................	CCGCACACGTCGAGCTGGTGGGGATTAATGCT	
   3927097	    29	 100.0	    32	.............................	CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA	
   3927036	    29	  96.6	    32	............................C	TCTGTGTATTCGCTACCAGCCAGCACCGGTAC	
   3926975	    29	 100.0	    32	.............................	CAGGGTAACTGGCTGCTCCTCAACCATTCCGC	
   3926914	    29	  96.6	    32	........C....................	GGGTTTTAGCGACCGGACCAGAGTACGCAACA	
   3926853	    29	  96.6	    32	........C....................	TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT	
   3926792	    29	  96.6	    32	........C....................	GGAGTGATGAATTGGAAGTAACGGATAACCGC	
   3926731	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        20	    29	  99.3	    32	GTGTTCCCTGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT
# Right flank :  GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCTGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-5.80,-11.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//