Array 1 8965-8342 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017256.2 Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 8964 30 100.0 35 .............................. TGTCCTTACTGTGGAAGTAAAAATATTAAACCAAT 8899 30 100.0 36 .............................. GGTACACTAGCACCACAACATTTGCACTTATAGGTT 8833 30 100.0 37 .............................. TGGAAGCCCTAGTAACGGGGCAATGGGGAGTTACACT 8766 30 100.0 36 .............................. ACTTCTGTGGTTCTATATATTCCATTTTCACAAACT 8700 30 100.0 36 .............................. GCTTCACTCTTAGTATTAGCCATTTTAGTTTTAAGA 8634 30 100.0 34 .............................. TTTAGAATACATAATAAATAAGACATATCTTCAT 8570 30 100.0 37 .............................. CATTATAAGTGCTAGAACCATCTGACCACACTTCTTC 8503 30 100.0 36 .............................. GTTATTATTTCTTCAAGTAATGAATAGCAAGAATCT 8437 30 100.0 35 .............................. ATTAAAGGGGACAAGTCAACAGAAGTTGTATGACT 8372 30 93.3 0 ........................A....A | A [8346] ========== ====== ====== ====== ============================== ===================================== ================== 10 30 99.3 36 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : TAAAAGCGTTAAAGATTTATATTAATAAAAATTCTTAATAATTCATAATTAATATTCTAAAATTAAAAACATATATAACAGATACCGAATTGTTGTGAAAATGAATTTGTGGTATTTTTCTATATTTAAAATACTGGGACATACTAAAAAAAGTGTACAATTTAATGAATTTAGATAACAAATTTTTTAGTATGTACAAGCAAAAACTAATAAGATATTGAAATATTACATTATTTATAGTGAAAGTATTTGAGTGAATTTTGTCTTATGAATATAGATATACCTGTTTTGATAAAGAACTTAATTAAAATACCAAACATTTTATTTTACCAGCTATAAATTTATATAAAATCCCTTAATCCATTTAAATTCAATGGATTAAGGGGTTTTTAATAAGGTTTCTAAAAATTTCATAAACGGCTGGAAAAGTTTCTCTGAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTTAGAGAATGGCTATTTTACTATG # Right flank : CATCATGATTTTAGAAACATTTAGGATTCAATTATCTTAGGTGTTTTTTTATGCGATTTTAAAAAAGTGTACAATCTGTGATTTAACAAAAATTTGCCATAAGGAACAATGTGGAGAATGAAGTTGTTAAGTTAGAAAAGTTAAAGTGTAATGATGAAAATGAATCTATGCCAGAAGGTAAAATAAAAGAAGTTTTGGATAAAATAAAAGAAATAAGTAAGAGTGATTAAGCTAAGAATAAAAAAATATATAGAAAATTTATTATTTGGATAGAATATAATATAAATTAAAATTATGAACTCTAGAAATAGGATTATTTTATTATTCAATAAAGCAGAAAGATATAATAAAAAGTAATTAAGGGTACTGTATCTAAGAAAGCTGATAGATACTTTGTTTCAGTTATTGTTGATGTAGAATCAAGGCAAAAAAATAATATTAATAAAGGAATATGAATTTATGTAGGACTAAAAGATTTTGCTATATGTAGCAATGGATTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 156140-155321 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017256.2 Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 156139 30 100.0 35 .............................. GTGCGTATTGAGATGGGGGAAAATTATAGAATAAA 156074 30 100.0 36 .............................. TCTCTTAGAACCATTTCATATACTTCGATACATGTC 156008 30 100.0 36 .............................. ATAAATATAGATAGTGAATTAGAACCTAGAATGAAT 155942 30 100.0 36 .............................. AACTATGAGAAAATTTTATTTATCCGTTACTGATAT 155876 30 100.0 34 .............................. TTTTGTAATGTTTCAATTTGTTTTTTTAATTCTT 155812 30 100.0 37 .............................. TATATTAATGTACTTCTTATTGTCTTAGCTGTCTCTT 155745 30 100.0 36 .............................. TCTCTTAGAACCATTTCATATACTTCGATACATGTC 155679 30 100.0 36 .............................. ATAAATATAGATAGTGAATTAGAACCTAGAATGAAT 155613 30 100.0 36 .............................. AACTATGAGAAAATTTTATTTATCCGTTACTGATAT 155547 30 100.0 34 .............................. TTTTGTAATGTTTCAATTTGTTTTTTTAATTCTT 155483 30 100.0 37 .............................. TATATTAATGTACTTCTTATTGTCTTAGCTGTCTCTT 155416 30 100.0 36 .............................. CCTATTTGATGCATAGAGAGTATTACCCCATCACTA 155350 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 100.0 36 GTTTAACCTTAACATGGGATGTATTTAAAT # Left flank : CGGATATTATTTATTATGGAGAAGATTTATTATCGTATTTACAATTAGAATTTAATATGAAAAAGTATGAAGATATTGATTTTGACTTAATAAAAGAAATCAAATTTTGGGTGGACTTATAGGAATTGATTTAACAAATATATTTAACCAAACAAAGGTATTGCTACTTTGTTGATATGGTTCATATGCTGTTAATGGGGCAAGCCATTGGATTAGAGCTTTATGCTGGAACATTGAATATAAGTATAAAAAATCATATATAACTTCTTTTAATTTTGGATACCCGTTTTCATAAAGAACTTAACTAAAACATTAAACATTCTATTTTACCAGCCATAAATTTATATAAAACCTCTTAATCTATTGAAATTACAGGGCTAAAGCAATCTTTTTAAATTTTTATAAGAATTTCACAAACGGTTGGAAAAATTTCCTTGAAACCTTGAAGTTTCAATGCTTTAGTGGTATTATTGATTTTAAAGAAGGGCTATTTTACTATG # Right flank : ATTTTTGTAATAGAAGGCTTTGCATATTGAAAGTTTAGAAAAAAGTATAAACTTTGTTGAAGATGTAGTTAGAAGAAAAGGATATGCTAACTAATAATGAATTATTATATGAGGTGAATTTTTATGGAATCAAATAAAGAAAATATAAATTTATATAATCAATTTTTAAAATATTCATATTCAGAACTTAAAGAATTATTTAATCAAGCTAAAACTAAGGAAGAACAAGATTTTTATATGAGTATGGCCAATTTAGTTCTTCAAAGAGAACAAAGAAGAGTTATAAATGAAATGTAGATATAATGAAGCGATATACATTATTTGCAGGAGTAAATGGTTCTGGAAAAACATCTATATACAAATCTGTATTTTTTAATGAGGATTATATAGGAAAGAGAATTAATACTGATGAAATGGTTGCAAGAATTGGTTCATGGCAAGATAATAATCTTCAAATAAAAGTGGCAAGAGAAGCAGTTAAGATGATTAATTATTATATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //