Array 1 318458-325512 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYIY01000006.1 Algoriella xinjiangensis strain NCTC13469, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 318458 47 100.0 30 ............................................... CGTAATCTTGAATAAATGCCGCGTGATCAT 318535 47 100.0 30 ............................................... AAGATAGAATTGAAACTAATCAATTAACTA 318612 47 100.0 30 ............................................... CGTTTCTTTTGCTTTATTTCTATAATCAAC 318689 47 100.0 30 ............................................... TATTCTCTTCCATTAATAAAATATGAGCTT 318766 47 100.0 30 ............................................... AAAGCATCTAGTTTCATTGCTACTACTTCA 318843 47 100.0 30 ............................................... AGCATCTCTTAATATATTAGCACCATAGCA 318920 47 100.0 30 ............................................... ACATTGATATTTCTAATTCTTCACTTGCTA 318997 47 100.0 30 ............................................... AAGAATTTTCATTTGTTTTTGAATATGATG 319074 47 100.0 30 ............................................... ATAAATCTTATTTGATACATACTAAGTAAT 319151 47 100.0 30 ............................................... TGATAATAACGTTACTAATAATGGAGATGA 319228 47 100.0 30 ............................................... CATTATTTAACTGTTAAAGTTTTACATTTT 319305 47 100.0 30 ............................................... AGAAATCATTTCCTTATCAAACAGTATCAA 319382 47 100.0 30 ............................................... AGGATTCACTCGATTTAATTACAAATGAAA 319459 47 100.0 30 ............................................... TCCTTTAACGGCTAAAAAAATTGCAGAAGT 319536 47 100.0 30 ............................................... CGCTTATTTGATTGATATCATCTGAATAAA 319613 47 100.0 30 ............................................... TGATAATTTCAATATATCTAAAAGTTCGGC 319690 47 100.0 30 ............................................... AAACAATACCAGCGAATGAACCATCTTCAT 319767 47 100.0 30 ............................................... TAAATAAAGGTTTAAGCGATGAAAACATTA 319844 47 100.0 30 ............................................... CGGATAATGTTTCAAACGGTTATCAATTGT 319921 47 100.0 30 ............................................... TAATTGTTGTGATGCTTTTTTAGGTAGAAT 319998 47 100.0 30 ............................................... AACAACAAGAACAAGACTTAGCGCAACTAT 320075 47 100.0 30 ............................................... ATTGACCTTCTAAATCAACAATTAATAAAC 320152 47 100.0 30 ............................................... AAGATTCTTCAATGCCCCAAATAACAAATA 320229 47 100.0 30 ............................................... ATGTCCTAAAAGCTTACTAAGCTTTGTAAT 320306 47 100.0 30 ............................................... CGAAATTCAGCTTCGGACTTTCCTTTTACA 320383 47 100.0 30 ............................................... ATTTAAGAACAAACGGCGCGGGCGTCTCGA 320460 47 100.0 30 ............................................... AAAACATCATAAGCCACATTTCCTTCATCA 320537 47 100.0 29 ............................................... TATCTATAGTTCCACCTATTTCTTGTTTT 320613 47 100.0 30 ............................................... CATACAGTCCTGAATTTAAAACGTACGTAA 320690 47 100.0 30 ............................................... TAACATCACTTGTTAACATCGCTTCATTTG 320767 47 100.0 30 ............................................... AATTTCAAAGCATTTAATCCTTGAGATAAA 320844 47 100.0 30 ............................................... TTTCAATAATAGGATTAAGAGCCGAAGAAA 320921 47 100.0 30 ............................................... ACGATTACGACGACGTTACAAACGAAATGT 320998 47 100.0 30 ............................................... AGTATTAATGCACGTTTCTAAACTCATGTG 321075 47 100.0 30 ............................................... TAGAAATGGTAACATCTAAAATAAACCATT 321152 47 100.0 30 ............................................... GGCAAACTAAACCACCATAAACAACTGCTG 321229 47 100.0 30 ............................................... AGGTAAAGCATTTAAAGATATTAAAGAATA 321306 47 100.0 30 ............................................... TAGAAATATCTTGTTCGCACCCAGAGTTTG 321383 47 100.0 30 ............................................... ATTTTGTTTTGTTTTTTGCGGTTGGGTCGT 321460 47 100.0 30 ............................................... AAAATATGGTAATTGATAAACTTGAGATTC 321537 47 100.0 30 ............................................... TCGCGTATAATCTAATAGTTTTATTACCAT 321614 47 100.0 30 ............................................... CAGTAAAGGAACTCCTAATTCATACATTGA 321691 47 100.0 30 ............................................... TGTTTCGTTTGACGGAAACAGTTTACCTAT 321768 47 100.0 30 ............................................... TAATTAATCCGTCATCATTATACCAATATT 321845 47 100.0 30 ............................................... ACAATGTTGTTCCAAATAGATACGGAGCAT 321922 47 100.0 30 ............................................... ATATCAACTTTAACATACGCGCCTCCTAGC 321999 47 100.0 30 ............................................... GCGGCGTTACCCGACAAGTTACCCGAACCA 322076 47 100.0 30 ............................................... CAGATGGACATCAATGTCCTTCTGTGATAT 322153 47 100.0 30 ............................................... AACAAATACAAGCTGTTTATAATGCTTTAA 322230 47 100.0 30 ............................................... AAGTTCGATATAGCGCTCTATATCTTTTTG 322307 47 100.0 30 ............................................... AAGCTTCAATTAATTGATAACCGTTTATTT 322384 47 100.0 30 ............................................... AGATGCTTGCCCACCAGGTAAACCAGTACG 322461 47 100.0 30 ............................................... AAGGAACAAGCTGCTGAATTTTTAAACGTC 322538 47 100.0 30 ............................................... ACCATTAGGTTTTAAAAAAGATGATGATCC 322615 47 100.0 30 ............................................... ATGAACACGGAATAATTGATTCTTATATAA 322692 47 100.0 30 ............................................... GGAAAAGAAATTGTAAAGAAAAAACTAAAA 322769 47 100.0 31 ............................................... TAAGTGTTCCTTCTAAGTTCATAATTTTTAT 322847 47 100.0 30 ............................................... TAGTTCCGGTAGTTTTTAAAGGAATTGATA 322924 47 100.0 30 ............................................... TCCTTTTGACGTGTGAGCTACAATCTCCCA 323001 47 100.0 30 ............................................... TAAAACCGTCTGTACAAAGACGTAGAGGTC 323078 47 100.0 30 ............................................... AGTGTCCTTAAATAATTTATTTAATTTACC 323155 47 100.0 30 ............................................... AAAGAGTGCTTTCCCTTCTGTAACTAGATT 323232 47 100.0 30 ............................................... ATCACTTTCAACTATATCAGAACGTTCTTG 323309 47 100.0 30 ............................................... CAGATGGACATCAATGTCCTTCTGTGATAT 323386 47 100.0 30 ............................................... AAAGACTTCCTTTTGAATTATCGTAATGAT 323463 47 100.0 30 ............................................... TAGGTATTCAATCAATTGGTATGAGTGATC 323540 47 100.0 30 ............................................... AAGGTAGTTTTGTTTCTATTATTGGACTAA 323617 47 100.0 30 ............................................... ACAAATGTATAAATATTATTTTAATAACAT 323694 47 100.0 30 ............................................... ATTTTTCGAGATGCAGAATTAAGTTTCAAA 323771 47 100.0 30 ............................................... TTACGCAATAAACGCAATTTTTCTTCAACA 323848 47 100.0 30 ............................................... AAGGAGATCAAGCAGATTATTTAAATAAAA 323925 47 100.0 30 ............................................... AACCAATCTGATATATTAGATATTGTTTTG 324002 47 100.0 30 ............................................... GGAAAAGTGTTATTCGAGTTAGAAAAAGAA 324079 47 100.0 30 ............................................... ATACTGCTCAAGCTGTTAAGAATTATCTCA 324156 47 100.0 30 ............................................... TATACTATCCTTACACTTTACCATAGTAAT 324233 47 100.0 30 ............................................... CAGCTTCTTCTACACTTGTTATTTCTTGTG 324310 47 100.0 30 ............................................... TCCTGGTTTAATTACAAGTGGTGTCATTTT 324387 47 100.0 30 ............................................... CAATTAGGATGAATAGTAAAACTGGTTTCA 324464 47 100.0 30 ............................................... TAGAGTACTATTTAAAATAAGTAAGTTGTC 324541 47 100.0 30 ............................................... GAAATTAAAAGACTGGAAGCGGAAAGAATT 324618 47 100.0 30 ............................................... AGACTGTACAACTACGACGCTACTATAATT 324695 47 100.0 30 ............................................... TGATTTTCATGGATATTGAATTAAAAAAAG 324772 47 100.0 30 ............................................... AAACTGATGGAGTGTTGCCAGAAATTAAAG 324849 47 100.0 30 ............................................... TATCATCAGATATTATAAAAGAATCAATTA 324926 47 100.0 30 ............................................... TTGCCTTCATTGATTATTGGGGATTATTAA 325003 47 100.0 31 ............................................... ACGAAAAACTAAATGATTAATAATAGAATGC 325081 47 100.0 30 ............................................... AGGAGTTTAATACTTCAGACAAGCATTTTG 325158 47 100.0 30 ............................................... TATAATTCGAAGCATCTTGATAGTCTTTAA 325235 47 100.0 30 ............................................... AAATAGGAGCTAATTCTTTGAATGATAATA 325312 47 100.0 30 ............................................... TATTTACCCATTGGATTAGAGGCTCTATAG 325389 47 100.0 30 ............................................... ACTATTCAGCAAAAAGATTATTACAAGTCT 325466 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 92 47 100.0 30 GTTGAAAGAACTTCGGTAAAAATACCAAATTGAAAGGAATTCACAAC # Left flank : GTATAAGTGTATGACAGGAGAACATCGCGTAATTCGGTATCCAGAATTGGTATGAGTTTTTCGCGATACAATGCATATCGAATTATGTGGGTATTAGTATTATTTGATTTACCAACCGAAACAAAAAAACAAAGGAGCCAAGCTTCTCGTTTTCGAAAAGATTTAATAGATGATGGATTTACAATGTTTCAGTTTTCCATTTATTTACGTCATTGTCCAAGTAAAGAAAATGCAGAAGTACATATTCGACGTGCTAAAAATTTTTTGCCCGAATTTGGAAAAGTAGGAATTATTTGCATTACCGATAAACAATTTGGTCAAATGGAAATATTTTTTTCTAAAAAACAAACCGATTTACCTGCTGGTCCACAACAATTAGAACTTTTTTAATAGAAATGAAAAAAATCCTATGTTTTTATAATTACATAGGATTTTTTATTGTTTTTTTAATTCTATTCAACCTCTGTAATCCACTCCTAGAGCGGAGAAATTAAATTGAG # Right flank : CTGTAAATAGCTTCTCCAGTTAAAGGAGTTGGTTGAAAGAACTTCGGTAAAATTGTACCAAACCAAGTTCTTTCAAATCCAATTGCATTTGACTTTAATCAATTTGACAATGATGATGTTGCTATTCAAAATTTGAAGATTTGAAATTTGTAATTAAAATTAAGAAAATAGTATATACTGACGAATCTATTTTTAGAGTAAATAATATTTTTAAAATTTAGTCTAAAAAAATTAGTACAAAAAGAACCCTCAATTAAGTAAATTGAGGGTTTTATTTTACCAACTGATAAATCGTCAAAAGTGAAACAACACTTGTAACTCCGCCAATAACATAATTAATATTTTTTAAAATAAATGAATTGTCTTTAGATTTATTGTTAAAAAAACGTAAGTACAAATAAAACATAATAAGCGAGCCAATAACAACGCCTAAAGTGAAAATAGAGCTGTTAGGATTTCCGAATACAATAACGTTATAAGAAACCAATGTTGCGCTTAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAAGAACTTCGGTAAAAATACCAAATTGAAAGGAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA //