Array 1 1701-399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGKXO010000087.1 Klebsiella pneumoniae strain Kp_HUCA_Bac_93 NODE_194_length_119049_cov_62.692909, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1700 29 93.1 32 ............TG............... AGACCGGTATGGAAGCGAAAACGGCAACCTTC 1639 28 89.7 32 ............TG.......-....... AATTGGGCTACCGCATTATTCCACCCTCTGAT 1579 29 100.0 32 ............................. TGGAGTTTTAGATAGTCATAATCACCGTCGTG 1518 29 100.0 32 ............................. CTAATCAGCGGTATATTTTTTCTAATCTGAAA 1457 29 93.1 31 .............T.T............. GACAGTCACTATGTTCGGTATGTTTAAAAGA 1397 29 89.7 32 .....T.......T.............A. GCTCTGAGGATGATATGCACCGGCACAGGTGC 1336 28 86.2 31 T...........T...T....-....... TGACTTTTAGTAGTGCTTTTTTTTGTTTTTT 1277 29 93.1 32 ..C..........C............... GCCATGCAACGTCTGAACGTCCGAAACATCCC 1216 29 100.0 32 ............................. AGCAGTTCGAGGAATAGTGACAGGCAGTGCAG 1155 29 93.1 32 ............TG............... TGACTTTTTAAAAAAAAATAGCTGAAACAACA 1094 28 86.2 32 ..........-.TG.......T....... TTCTTTGTTCGTATCTACATCCAGTGCTGAAC 1034 29 96.6 32 .............T............... GCAGCGGCCTGACGATGATCGATATGAACGGC 973 29 93.1 31 .............G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 913 29 96.6 32 ..........................T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 852 29 93.1 32 ............TC............... GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 791 29 93.1 32 ............TG............... TGACTTTTGCGCAGCCTCAGGGCTCCGGTTTG 730 28 96.6 32 .....-....................... AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 670 29 100.0 32 ............................. GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG 609 29 93.1 32 ............TG............... GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 548 29 93.1 32 ............TG............... TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 487 29 100.0 32 ............................. CACTACCAGATCCGAATGGACACCCGTAATGA 426 28 89.7 0 ..............C........-....A | ========== ====== ====== ====== ============================= ================================ ================== 22 29 94.1 32 GTATTCCCCCCGCATGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAGGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACTGGCGCAGAACTCCGCCATCGCATGAGTATTAAAAATGCGACTGATGAAGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGGGGGCATGCGAATCATAACTGCGGTCTGGTTGAGGCTCACTGGACAGTAACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCTCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATTATCAACCGGTTATTTTTAGA # Right flank : ACATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCATATCTTGCAGGTTGCAATCAGAAAAGGCCTTACGTCGATAAATTCATGCCTTGAACTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGAACCAATTTATACTGTTTATATATACAGTGTGCGCCGGGAGACCGGTAGAGATCAAGGGGTGAAAGTCCCCGACCATTGAAGGACCAGCAATCC # Questionable array : NO Score: 5.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Alternate repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [9-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.77 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //