Array 1 150698-154636 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJHA01000009.1 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain ATCC 19606 NODE_5_length_343333_cov_64.5223_ID_4747, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 150698 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 150758 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 150818 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 150878 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 150938 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 150998 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 151058 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 151118 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 151178 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [151230] 151230 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 151290 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 151350 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 151410 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 151470 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 151530 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 151590 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 151650 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 151710 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 151770 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 151830 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 151890 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 151950 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 152010 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 152070 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 152130 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 152190 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 152250 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 152310 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 152370 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 152430 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 152490 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 152550 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 152610 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 152670 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 152730 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 152790 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 152850 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 152910 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 152970 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 153030 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 153090 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 153150 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 153210 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 153270 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 153330 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 153390 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 153450 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 153509 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 153569 29 82.8 30 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTT 153628 29 82.8 31 CG..C.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC G [153630] 153689 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 153749 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 153809 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 153869 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 153929 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 153989 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 154049 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 154109 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 154169 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 154248 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [154272] 154308 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 154368 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 154428 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 154488 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 154548 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 154608 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTA # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-69] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //