Array 1 3358308-3354618 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058912.1 Aeromonas veronii strain JC529 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3358307 28 100.0 32 ............................ CTCACGCCCTTCCGGCACCACTTGAAGGAATG 3358247 28 100.0 32 ............................ CGATTATCCAGGCGGCGGTACTCTTCGCGGCT 3358187 28 100.0 32 ............................ TTTGCGTTGAGGTCGATAACCTGGTGCGCCAC 3358127 28 100.0 32 ............................ GAGCAGGGGATGAAGTTCGGGCAAGTGACTAT 3358067 28 100.0 32 ............................ CAGATCAAGCAGACGCTGGGCCGCCTCCTGCA 3358007 28 100.0 32 ............................ GAGCTTGGCGCGGCGCTGCAGATTATCCGTCA 3357947 28 100.0 32 ............................ ACGGATGGCGCAGGCTCTCTCTAGCGCCTGAA 3357887 28 100.0 32 ............................ ACCCCAGCCCCTCCGTTCAGTTTGATGTTTGA 3357827 28 100.0 33 ............................ AGTACGGGTTATCCCGCCAGCAGGTTGCTGATC 3357766 28 100.0 32 ............................ ACTCACGCACATCGGCAACGTGCGTAACCCTC 3357706 28 100.0 32 ............................ TCGTTTAGCCGCTTCCTTACCGTGTCCCGGTG 3357646 28 100.0 32 ............................ AAGACCCCACGGGCAGATGTGGAAATCCTCAA 3357586 28 100.0 32 ............................ CACAGCCAGTACGCCGCGAGCAGCCACAACCA 3357526 28 100.0 32 ............................ AAAACGGGATCCTACAGGGGGAGAGAAGGGAA 3357466 28 100.0 32 ............................ CTTCCGCGCACTGCCAATAAAACAAGCGGCGA 3357406 28 100.0 32 ............................ AAGGGCTCAGGGGTGATTGTTGGCCGCTTGAA 3357346 28 100.0 32 ............................ GTCTGGGCAAACTTGACCCGCTCTGATTCCGA 3357286 28 100.0 32 ............................ GGGAGAATCAGCGGGTAAGGGGTCAAGCCTAC 3357226 28 100.0 32 ............................ CGTTGACAATTCCGGCCTCGGCAGGGTCCCCG 3357166 28 100.0 32 ............................ TAGCGGACGACGACGCGACGAGCGGAAAGTGA 3357106 28 100.0 32 ............................ GAGAAGAATCGGATTCGGTAAGGGCCGGGGCT 3357046 28 100.0 32 ............................ TAACTAGGACGCAGCGGTGGGGACCATACCGG 3356986 28 100.0 32 ............................ AGCAGGGCGAGCCGGGTCACTGCGCTGGTCAG 3356926 28 100.0 32 ............................ TGGTGCATGGTTGGCTGGTATGTTGGGTTGAG 3356866 28 100.0 32 ............................ TTCTTCGGTGACAAGGTAGTGGGGATCTGACC 3356806 28 100.0 32 ............................ TTTGCCAGATTCTCCACCAGGGAGATCAGCAC 3356746 28 100.0 32 ............................ AAGGCCGTGGCCGCCATCAACGGCAACAAGAA 3356686 28 100.0 32 ............................ AGCTCGATTGCGCTGGTCGGCATACCCTCTGA 3356626 28 100.0 32 ............................ GTCCAGTTCTGTTGAAAATACGGTGGCAACCT 3356566 28 100.0 32 ............................ TGGTTGATTCGGAGGTTGCGGGGCCGCACATC 3356506 28 100.0 32 ............................ TACCCACTCGAACTTCCGGTTGTGCTTCTTGA 3356446 28 100.0 32 ............................ GAGCGCGGGTTACCGATAGAGAGTGCATATTC 3356386 28 100.0 32 ............................ GTGACGGAGCTGGAGCAACTCGAGCTCATGGT 3356326 28 100.0 32 ............................ AGCTGGCTGCTCGGTATCGACGGGGTGGAATC 3356266 28 100.0 32 ............................ TGGCTGCAGGAGGCCACCATCCCTGCCGGATT 3356206 28 100.0 32 ............................ AGCAGCCAGCGCGGGTTAGGCATAGTCGGCAA 3356146 28 100.0 32 ............................ GTGACGGCCAGCCACCGGCAGGCAAACTGCGG 3356086 28 100.0 32 ............................ GGTATCGATAACATGGGCGTGATGGTCGATAC 3356026 28 100.0 32 ............................ AAGTCAGGCGGCCTATCCAGCAAGCTCTCCAT 3355966 28 100.0 32 ............................ TGCGCGAAGAGTCCGGCGATATCGCGGCCACC 3355906 28 100.0 32 ............................ AGCTGCGCGTCTTCGCAGCCCTGATCCAGTTC 3355846 28 100.0 32 ............................ GGAAGAAGGCACAGCGAGAGCGTGACCGGACA 3355786 28 100.0 32 ............................ CACCACATCACCAGCAGGCAGTGATCGTCAGA 3355726 28 100.0 32 ............................ ATCCGCACCGACAAGAAGCGACCCTTCTATCC 3355666 28 100.0 32 ............................ AGATGGGACACGCAGATCTTGAAATGCTTCAG 3355606 28 96.4 32 .....T...................... TGCTGGCAAAAGCCCGCAACTAACCGACCAAA 3355546 28 100.0 32 ............................ AAGGACGCGGACGACTTCGGCAAGCTGGTTAG 3355486 28 100.0 32 ............................ CATTGCTGACCGAGCTGCCGACATCTTGTCGG 3355426 28 100.0 32 ............................ AAGGACGGCGCCAGCCACATCCAGCGCCTGGC 3355366 28 100.0 32 ............................ ATAGGCGGCGCTGGCGAGCTGGTGAACCTCCA 3355306 28 100.0 32 ............................ CACATCAGCGGTTGGCGGCGGGCGCCCATACC 3355246 28 100.0 33 ............................ TTTTCGAAGTCCGAGACCGCCTCGCGGTTGTTG 3355185 28 100.0 32 ............................ ATGCGCACGTTCAGCTGGAAGTCCCGGGAGGC 3355125 28 92.9 32 .............T....A......... CTTGAGCAGGTCCATGCTGCGCTCTGGCAGAT 3355065 28 100.0 32 ............................ TTGAACAGCTCGTCGGCGGTCTCGGGCTCATC 3355005 28 100.0 32 ............................ AACAACGATGAGCTCTACTCCATGGGCTATGC 3354945 28 100.0 32 ............................ TTGAGGGGGAGGGGCAGGTTTAGGCCGGAGGC 3354885 28 100.0 32 ............................ GCACCTTGAGGCCGACCGGGATCCCCGTGGTA 3354825 28 100.0 32 ............................ GGTGCGCCGTCAGCACATCCTGGGCGGTGATC 3354765 28 100.0 32 ............................ TCGGCCACAAACTCGACCCGGACGAAGGCAAC 3354705 28 96.4 32 ......................A..... TTTGGCATTAACTGTATAATCCCGATTATCGA 3354645 28 92.9 0 ...........T.........C...... | ========== ====== ====== ====== ============================ ================================= ================== 62 28 99.7 32 CCTCGCAGCCGCACAGGCTGCTTAGAAA # Left flank : TTGGCCGACTTGCTTAACCTCACTGAGGTGAACTGGTTGCAAGGGATGCGTGATTACATCCATATCGGTGAGCTTGCCACGGTGCCGGAGGGAGCCTGTTTTAGGGTTGTAAGAAGGGTTAATGCCAAGAGTGCCCGTAACAAGCGTCGTCGTTCTGTGGCAAAGGGTTGGTTGACCGAAGAGGAGGCGCTGATACGCATTCCTGATACTCAGCAGAAAGTAATGACACTTCCTTATGCCGAGATGCACAGTCTTTCTACTGGTAGCAGGATGCGGCTCTATATCGAGCACGGTCCCTTGCTCGATATGCCGGTGGTTGGTGAATTTAACGCATATGGATTAAGTGCCACGGTTACCATTCCCTGGTTCTGACCCTATTTTCAAGGGTGTAGCTAACACATTGATTCTAGCTGTGTTCTACGCCCTTGCTCGAATAGGGGGTTGTGTATAAAGCTAACCGAGTTCTTTAAAAATCAATCAGATAGCACTAACGTGCAACA # Right flank : GTTACACTCCATGGTGACTGGTGAATTATGGTTGCTCTCTGCAGCCCAAGAGGGTAAAGAAAAAACGGCCACATAGGCCGTCCGAAACTTGTCCGAAACTTGACCGTTGCCTCGGCCGTTATCAATAACCAATTCTGCTTCAAGAGTTCATGTAGCCTCGTTCTTTGAGTGATACAACGCCATTACTAGCAACTACCAAATGATCTAGGGTTCGGATATCAACCAGAGCCAAAGCACTGTGCAGTCGCTGGGTTATTTCTATGTCTGCTCGGCTGGGTTCAGGGTGACCTGACGGGTGGTTATGCACCAGCATCAGAGCTGCTGCATTGAGCGCCAGCGCACGTTTAACAACTTCCCGTGGGTAGACGGAGGCACTGCTGAGCGTGCCGCGAAATAGCTCCTCATATGCCAAGAGCCGATGCTGGTTGTCCAAGAACAGCATGGCAAGTACTTCATGCTCTCTGCTCTGCAACAGGGTTTGTAGTGCCTGTTGAGCCAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCAGCCGCACAGGCTGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAACAGCCGCACAGGCTGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //