Array 1 2341865-2338713 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFDN01000001.1 Acinetobacter baumannii Canada BC-5 Contig569, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2341864 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 2341804 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 2341744 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 2341684 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 2341624 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 2341564 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 2341504 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 2341444 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 2341384 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 2341324 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 2341264 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 2341204 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 2341144 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 2341084 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 2341024 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 2340964 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 2340904 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 2340844 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 2340784 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 2340724 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 2340664 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 2340604 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 2340544 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 2340484 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 2340424 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 2340364 30 100.0 29 .............................. TTTTCTGTTAACTCTAAAATACCCTTCCG 2340304 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 2340244 30 100.0 29 .............................. GTCTGATCCGACAATTTGGCTGAGTACGT 2340184 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 2340124 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 2340064 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 2340004 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 2339944 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 2339884 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 2339824 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 2339764 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 2339703 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 2339643 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 2339583 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 2339523 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 2339463 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 2339403 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 2339343 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 2339283 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 2339222 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 2339162 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 2339102 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 2339042 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 2338982 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 2338922 30 90.0 29 .......A.....C...T............ GGCGTACGGATAACGGAAGAAAGCATAAG 2338862 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 2338802 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 2338742 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.41 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //