Array 1 13031-10955 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLYX01000031.1 Lactobacillus helveticus strain JCM 20397 sequence031, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 13030 30 100.0 36 .............................. TAGTAAGTGATAAAGATGAAGTTTACTTGCCACAAG 12964 30 100.0 35 .............................. TGCAACACCAGCATTACTTGCATCAATTACTAAGT 12899 30 100.0 37 .............................. TACCAACTTTCATATAACGGTTTTGTTTTTTATCTTC 12832 30 100.0 35 .............................. CTTTAAAAAAAGCGTCTTACATTGTTTACCATTGG 12767 30 100.0 35 .............................. TTTATAATATCCTGCGCTCTTGACTGAATTATTTC 12702 30 100.0 36 .............................. CAAAATGGTCGATCAAGGTAAAATACCTTTGATTGA 12636 30 100.0 37 .............................. TAATGAGTTGTCACTATTGCGTTTCATAAATAGAGGC 12569 30 100.0 37 .............................. TTATCCAGATGGCTACTTTGATCGTGATGCTTGTCCC 12502 30 100.0 37 .............................. ATGCCATACTTGTCGGAAACACCGTAGTACTTTTCGC 12435 30 100.0 36 .............................. TTGTGCTTTGGTAACTGGCAACGTCCACACCATAGC 12369 30 100.0 36 .............................. TTATAAATATCATCATAGGCATCAATTAGACCCTTG 12303 30 100.0 35 .............................. TCTTTTTTAACAGCGTTAATTTTATTGCGTTCAAT 12238 30 100.0 36 .............................. ACATCAATTTGAGGAGGAACAGTAGCTACATACCCT 12172 30 100.0 36 .............................. ATCAGGAAGAAAGCCCGAACACCAAACCAAGTGCCA 12106 30 100.0 35 .............................. TATTCGATGTAGTCATCATAAATACAAATGGTTGG 12041 30 100.0 35 .............................. TAGCTTCTTTTTGATACGATTGAGCTTGACATCAC 11976 30 100.0 36 .............................. CTTGGCTTACCTTGACTAACTCCGCTTCAAAAGGGC 11910 30 100.0 35 .............................. AGATTTTCCAGCTTGTGTTGGTATTAATGTATTTT 11845 30 100.0 35 .............................. TGGCTTAATTCATGCGTACTATGCACCAGATCAAG 11780 30 100.0 37 .............................. TAATGTTGTTAATACTGTTAATGGCGATGACTGGTAC 11713 30 100.0 36 .............................. AAATAAAATACACGGTAATAAGTGGAAACCACTATT 11647 30 100.0 36 .............................. ATAAAATACACGGTAATAAGTGGAAACCACTATTAG 11581 30 100.0 36 .............................. TAGCAATAATATCCACTAATTTCAAACTGCCAAACA 11515 30 100.0 36 .............................. GCATTTGAGATTTAACAACACGTGTCATACCGGGAA 11449 30 100.0 36 .............................. GAATTAATTAAGTTGTTGGTCTTTAATGAGTTGTTA 11383 30 100.0 37 .............................. TGGAATAAGTCTTTGCGGATTTCATTGGTAAGCTTAG 11316 30 100.0 36 .............................. TGTTAAAAACGCAGAAGAAGCTCACTCAATGACCGT 11250 30 100.0 36 .............................. TACTTTGGCGAGATGGGACTAACTAACATTTTAACC 11184 30 100.0 36 .............................. AAACTTGAATGATCTATAGTACCTCTTTTTGAGTGA 11118 30 90.0 38 ............T.............G..T TTTTGAAAGTTTAATCTAAAAGTTTTAGTAGTTGGTAG 11050 30 83.3 36 ..C.........TC....G..........T AAAGCCGAATTTTACACCAACTTTACTAAATATGCT 10984 30 73.3 0 .A......C.......G...G..AA...TT | ========== ====== ====== ====== ============================== ====================================== ================== 32 30 98.3 36 GTTTTTATTTAACTTAAGAGAAATGTAAAG # Left flank : CCTATGAGCCTTATGTTATGGGATGGTAATAGATATGTATGTGATTCTGGTTTACGATATCGTAATGGATAAACAAGGTGCTAAAGTAAGTAGACATGTTTTCAAAATATGTAAAAAGTATTTAACTCATGTTCAAAATTCAGTATTCGAAGGTGAACTAACCAAGTCCCAGCTTGAAAGCTTGAAGAATGAGTTGGATAGATGGATTCGACAGAACGTTGATTCAGTGATTATATTCAAAAATAGAAATAAAGATTGGCTTGATAAAGAATTTATGGGTCAGGATTTAACTGATTTAACGTCGGATATATTCTAAAGAAGAATCTGTCGATGTAAGATACGAAGAAAATCCTGGGAGATCGACAGATTTGCAAAATGCCGGTACAATGATATTTGTGCGATTTGTCTAATGATTTTAGTGATTTTTGGATGCGTTTTTGGTTAGGTCGACAGATAGGGCCGTTGAATCTATTGATACAGTAGGACTGGTAGTTGCAACT # Right flank : GTGTGATTAAAGTCAATTAAATATAAAACATAAAGATTTATATTTAATTTACGGGAAGGAAACTACAATCAAACATCCTACTAAAATCCTACCAATTAAACTGGTAAAATAGATAAGTAAGTATAGAGAACAATTTTTATAAAAGGGGAATAAAATGGCAGATGAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGAATCTTTCAAGAGTCCGGACGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACGTTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGGTGAATACAAAGGTGGACGTGCGAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAACTTATGAATTGAAGAATTATGAAGCAG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGAAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //