Array 1 147382-148791 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSBA01000002.1 Lachnospira eligens strain AF06-14 AF06-14.Scaf2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 147382 30 100.0 37 .............................. CTGGATAACTACGGCATAGGTACTGAAATTGTAGTAA 147449 30 100.0 35 .............................. TAATATTCGTTTAATGTAATTTCCCCACAATCTAA 147514 30 100.0 36 .............................. GAGCCAGGAGTACCAGTATAAAGAGAAATCATAATA 147580 30 100.0 36 .............................. TAGCCTGCCATATGGGAGCGCAGGCCCCATATAACC 147646 30 100.0 36 .............................. AAAAATATCTGTATTCTGATTTTATATCATCATGGA 147712 30 100.0 37 .............................. ACAAGAAAGGAATTAAACACCCTTTAGGAGTGTTTGA 147779 30 100.0 38 .............................. TAGTAAGATATAGAAACCCACTTACAAATCATTATCTA 147847 30 100.0 37 .............................. ATATTTATAGCTATATTTGATTCTATAGGGAATAAGG 147914 30 100.0 35 .............................. TATGTAACTGTAGGGGTAATTTGTGCAGCGTCATC 147979 30 100.0 35 .............................. GTGACAATCTGTGGCTTCACGTTTTCGTTTTGGGA 148044 30 100.0 35 .............................. GACGGAGTAATTAACATGAACTCGGCTTTCAGAAA 148109 30 100.0 34 .............................. TATGAAGATTACGCAGTACAAAACGGAATATTAT 148173 30 100.0 34 .............................. GTATCCGTGAGCGTCTATCTGCCATTGTGCCCTT 148237 30 100.0 35 .............................. AGATTATAAGCCATAACAGCAAGTTGCATTTCGTC 148302 30 100.0 36 .............................. ACGGATGTGACCTCTGAAATACTCGTACAGCTTAGA 148368 30 100.0 37 .............................. AGATTATGACGGACAGTGTATTATCTATGTCATTGAC 148435 30 100.0 35 .............................. TGTAATGGTCAACATTTGTTATAGGTCCGCTAATA 148500 30 100.0 35 .............................. TAGTTTAGCGTGTTGTTGTTGTGTGAATTACGCAC 148565 30 100.0 36 .............................. TAGTTTAGCGTGTTGTTGTTGTGTGAATTACGCACA 148631 30 100.0 35 .............................. ACAGATGACAAGGCAGCACAGGAGACTCCGTATGA 148696 30 100.0 36 .............................. GGGCAGGACAGCGTGCTTAATCATCCGGAGTATTTA 148762 30 93.3 0 A....................A........ | ========== ====== ====== ====== ============================== ====================================== ================== 22 30 99.7 36 GAATTAATAGATACATAGTGGGATGTAAAT # Left flank : AAAGCATTTAATAGGCGAGAAAGAATATGAAGGGTTTAGAATATGGTGGTAGTATATGTATATTGTACTTGTATATGATGTTAGTAAAGATGAAAATGGGCAAAAGAGATGGTCACATATTTTCAAAATCTGCAAAAAGTATCTGACGCATATTCAGAATTCTGTCTTTGAAGGAGAAATATCAACAGTTCAATTAGAAAAATTACGACGTGAGTTGAAACCACATGTTAATGCTAATCTGGATTCAGTCATTTTATTCAAAAGCAGGAGTGAAAAATGGCTGGATAAAGAATTTTGGGGTAAGGAAGATGATTTGACGAGTTTCATAATTTGATTGTCGACCAGAAATAGTGTAAAATATGCACAGAGTCGACAATGGCGATATTGCTATGCTTCTGGCATATTAAGGGCATAAAGTATTAGTAATCTCTTGGCGGATTTAAAGGGTAGACAGAATAACGCTTCAGAGTTGAGAAACAGAGAGGCTTTAATAATTACGG # Right flank : TCTGCGAATAGGTGTAATTTCAAGAGAAATATTTTTTATCGTTATTCTGTTGCACCGGTGCAACTTTGAATTATTCTACTATGCACAAATCTTCTGCAAGCATATCTGCCTAAGATTTTGCTCTTGCATAATTCTTCATTTCTAAATCCTCACTTTCTTAAAATTGGGTATAAAAATACCACCAATCTCTCGACTGGTGGCTACTCATCTACTGTCCCTGTTCCCAAGCCCACTTTTTAAATTTCTCAGCAGCTTCTATTGCTTCTTTAGGGGCATTTTCAAGATGACACCCAACCATAAATGGTTCAAAAATATCAATAAGTTTCTGTATCTCTTCTGGATATTTTACTGGCATAATCTTACCCCTTTCTTTTTATTAATGTCATATATTCCGCTTCAACTTCATCATAACGATTTGCAAAATACATTTTCTTTGCATAATCACTTATCTTACCCACATTATATTCATTTATACCAAGTGCGTCAATTGTTTTCTTACA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGATACATAGTGGGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 150469-152074 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSBA01000002.1 Lachnospira eligens strain AF06-14 AF06-14.Scaf2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 150469 30 96.7 34 ..........T................... GGCTATAGCTGGTCAAGATGGGATGGCTCTTTCA 150533 30 96.7 36 ..........T................... GCGGGGAGCTTCAGACTCAGGGAGGTATAAATGACA 150599 30 96.7 35 ..........T................... GTAACAACCGAAGTAATAACTTCCTGTGTAAGTCC 150664 30 96.7 36 ..........T................... GTTCTATAGAAATCAAAGCAAACAATGTCGAATGTT 150730 30 96.7 35 ..........T................... ATATCTACGATAAGTTACAATTCAGAAGAGTTTTT 150795 30 96.7 35 ..........T................... AAAAGCATAGAAAGAGATAAGGTGAAAGTGTATGG 150860 30 96.7 36 ..........T................... ACCCTGGCGGTCTATGTATTTTCTTTCTAAAATGGC 150926 30 96.7 36 ..........T................... TTGAAAAGACTGGGGAAGATATAACATTTTCTATCA 150992 30 100.0 36 .............................. AAAGCCAAGTACATATATGTTACAGAGCATGATCCT 151058 30 100.0 36 .............................. AAGAATCAGGTATTTGCTGTAAATGATGCAGATAAG 151124 30 100.0 36 .............................. CATGTTTACAATATGCTTTGTGATGCCTTTGCTGGC 151190 30 100.0 36 .............................. AAGTTAGACCAAGCGGCGCTCGTTTACGACGCTTTT 151256 30 100.0 36 .............................. CTTAATTACTTAGAAGCCTTAGAAGCTGTAGCAGTG 151322 30 100.0 36 .............................. AGTTTGATATATGTGGATTGTTTACATACACACAAA 151388 30 100.0 36 .............................. ACAGAAACGCAAGAGAACACACTCGCAGAAATCCGC 151454 30 100.0 36 .............................. GCAAAACAAGTACAGTAAAAGGTGTAAAAGAAAATA 151520 30 96.7 35 .....................A........ TTGTACGCTTCTTTCCGGGATATACGCAGCTTCTC 151585 30 100.0 36 .............................. TGCATCAATGATTGCATCCACGATGTCGATTCGCTC 151651 30 100.0 35 .............................. AAACTTAATGGCACTAAACTTTAGGAAAATGCCGA 151716 30 100.0 35 .............................. TTAAACAAAAATCCAGAAGTGGTGACAGCGTGTGG 151781 30 100.0 37 .............................. CATTTCAAGTGGTATAGGAAGCGCCCTGCCATTTTCC 151848 30 100.0 36 .............................. ACGTACAGCTCCGTAATAGAATGGATTGCTCAATAT 151914 30 100.0 36 .............................. TACAGTTATATCTAAGGGTGAGATATCTCCTTATCG 151980 30 96.7 35 .....................A........ TTTGATGCGATAGTTGTTACTATAGGTGCATTTGC 152045 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 25 30 98.7 36 GAATTAATAGATACATAGTGGGATGTAAAT # Left flank : AGAAAATATAGTAGTAAATAGACAGAACAATGATATATTTAAAAGATAAAATTAAAAGAATATGACTTACAAATTAGACAATCTGAGGAATTGAAAATATTTTTGAGATGAAAAAGATTTATTTAATATGGAATCTGATAGCAAAGTTTTGAATGCCTTAAACAATATAAAAACATTTTAGAGGTACTTATGAAATTATTCTCAAGGGTAAAAATATCACTGTTTTTACAATTAGCAATGGCATTGATTTGACATCGACTTATGTATTTTGTGAATTGTGGGAAAAGCAAGAAAAGTTATAAGTGAAAAATGATAAAGATATATTTGAAATTGCTTGTCGACCTATTATAGTGTAAAATATAAGCAAGGTCGACAAAGGCTTAATTTATGCGTTTAATTTGAATTTATTGAAAATGACATTAGTAATATATGTGAGATTTTATTAGAACGACAAATAACAGCTTTAGATTAGAGGTTTAAAGATGTATATAAAATTACGG # Right flank : TTAACTAAGTATTACAAAGATACATTAAACGGGGCAGTATGGAGATAACCAGCGGTGCATTTTCATATGGTAAGGTTATTAAAAAACCATAAATGAAATGACGAATTCTGGGTTAAGGACAATAGATTATGCAAGTGGAAGGACGAGCCGTATAGAGGTAGCAGCAAGACGAGCCATAATGACTGCAGTTACACAAGTCACGACAAAGGTAACAGAGCAGAAAATGGAAAAGCTGCATACGGATTATGTAGAAGTAAGTTGGCATGAGACAGCAAGACCTACGCATCAGGTATGGCAGGGATGAGTGTTTAAATGGAATAGAAATAATGATGCGGATAATAAAATTCAGAATATGGAAAAACAGAGTATATCTGTAGCAAGGAGGAAACAGGCACAAAGCTTAAGAAATGATTCTAAATATCAAGATACAATCAGGCAGAGGAAAGAAGAATGGAAGAAACGACATTCAGAATTTGATAAAGCTACTGCTAAGACAGAGA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGATACATAGTGGGATGTAAAT # Alternate repeat : GAATTAATAGTTACATAGTGGGATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 3 154737-158699 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSBA01000002.1 Lachnospira eligens strain AF06-14 AF06-14.Scaf2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 154737 30 100.0 35 .............................. GTAATTACTTAACGAGTGTGCAGAAAGATAATTTA 154802 30 100.0 34 .............................. TTGATAGACTTAAATATATTGTCTATTGCACTTT 154866 30 100.0 35 .............................. TGCTTTACACCTAAGGAAGATAATGTTTTGTTAAT 154931 30 100.0 35 .............................. ACAGTTATCAGTGAAATGGAATTGGAGTGTAAATA 154996 30 100.0 36 .............................. GACTATGTTATTTCTACAATGCTAGACGCTTATGAG 155062 30 100.0 36 .............................. GAGGATAAGGAGCATAAGATGAAGTCACTTGACAGC 155128 30 100.0 35 .............................. GAAAGAAAACTATTAAACTCTCCTGTTGTAATTAA 155193 30 100.0 36 .............................. TAGATTGTCACCAGCCTGAACTGTGTAAGAATCTGT 155259 30 100.0 35 .............................. CATATCCTTAATCTTACTTGGTTCGTCAGTATCAT 155324 30 100.0 36 .............................. AAATATCAAGAACACATGTTCGATATCCGAGCCGAC 155390 30 100.0 35 .............................. TTAATTTATCTGTTACATATGGGGCTGGGGCGAGA 155455 30 100.0 36 .............................. ACTATAGCCGCAAGTGTACAGGGACTATACGATTTA 155521 30 100.0 35 .............................. GCTGGTATCAGACGTGCAACTTCTTTTGACGACCA 155586 30 100.0 35 .............................. CGCAAAAGGAATTAATTTAGCAGAATAAACACTAA 155651 30 100.0 36 .............................. TAGCATACAATTAATATAAGTGTTATAGGGTTGCTA 155717 30 100.0 38 .............................. CATGTATTATTAGCATATATAATATCACCGCAGTAATA 155785 30 100.0 36 .............................. GTATTAATAATAGCATTGCCAAGTGCTACAAGCTGT 155851 30 100.0 35 .............................. TATTCCCCAAAAAGGTGATAGAACACTACTTCTAA 155916 30 100.0 35 .............................. TAAAAAAATATGGGAATGTATGCAAGCGGTTAAAG 155981 30 100.0 36 .............................. CTTAAAGATGTTGCTCCTAGCGTCAATGAAAAACCG 156047 30 100.0 36 .............................. TATCAAAACACCCCTAATATTTTATTGTTTCTGTTC 156113 30 100.0 36 .............................. ACAGAAGAGCCAGACGAATCAACAGATTCTTACACA 156179 30 100.0 34 .............................. ATTGGAAAGTTGATTATGGACAATCAGCGTTACA 156243 30 100.0 34 .............................. ATAGTAACAAGTAGATACGACCATGTTAATATAT 156307 30 100.0 35 .............................. GCATTAGAGCTATTAGTAAGAGGTTCTTCTGCCAT 156372 30 100.0 35 .............................. CTTCTAACAGTAGAGATATCTTCGTATCTGTCATA 156437 30 100.0 36 .............................. ACAATAATTACCAAGGCATTAGATGTTTTGGAGAAA 156503 30 100.0 35 .............................. ATAATGAAGCTGTAAACCGTCATTTAGTGGTATAC 156568 30 100.0 37 .............................. AATAGAATATGTGGTGTTCTTAAAGCTGACGGCACTA 156635 30 100.0 36 .............................. ACGTATACATTATTTAAGACACTCGGTTGTAAGCGT 156701 30 100.0 36 .............................. GCTTGTAGTCTTGCCGTTCGAGCGGTCTGACACATA 156767 30 100.0 36 .............................. GCTGTTATTGTATCTCGTGAGTGGTTTATGGACTAC 156833 30 100.0 35 .............................. AAAAATTATGGTGGTGTAGAAGATGATTATACAAA 156898 30 100.0 36 .............................. TGACAAACATGTGACCTTGTGGGATTTGGGCGAGAA 156964 30 100.0 38 .............................. TATATATATCACATAACAAAAATTTAAAGAGAGGGCGC 157032 30 100.0 36 .............................. TTTTACAAAACTATGTACATTTGGCAGCTCAAGAAG 157098 30 100.0 37 .............................. GCGTCAGAAGATGAAGAAATGCTGCGCCTGATCATTG 157165 30 100.0 36 .............................. TACTGTGTATTTCCACGCGGAACAAATCCGGATTTA 157231 30 100.0 35 .............................. ATATTTATTATCACCGTCTTTTAATTCCTTTTCAA 157296 30 100.0 37 .............................. GAAATCTTAATTGGGAGCTTATGAAGTCGCGTTTTAT 157363 30 100.0 36 .............................. AAAGAAGAAGTAACAAATCTCGTATATTGGCGACAA 157429 30 100.0 37 .............................. TTCGATCACAAGGTTATTGAAGACTGGAAGGAACTGG 157496 30 100.0 35 .............................. GAGAAGAAGAAAATGATAAGGCTTTAACGCAATCA 157561 30 100.0 36 .............................. ACAGACACAAGAGCTGAAGGAACAGGGAAAGAATAT 157627 30 100.0 35 .............................. ACAGGAAGTGCAGATGTACACATTAAAACGGCTGA 157692 30 100.0 36 .............................. TTAGTATTAATATAATAACCTATTACGCAATATGAA 157758 30 100.0 35 .............................. TTATAATGTTTAAAATTGCAATTATAATTTATTAT 157823 30 100.0 37 .............................. TTCTTCGACCGAAGAATTATCATTCTGGAAGACAATA 157890 30 100.0 34 .............................. ATTTGAAACAGTTCCGCGAGCTATTCCGAATTCA 157954 30 100.0 37 .............................. AAGGTTGGTTTTGTACAGATTCCTGCGGACGCTGTTG 158021 30 100.0 36 .............................. ATATGAGTTTAGATGATAATTTACATTCCGTAAATA 158087 30 100.0 35 .............................. ATAGATTATACAATCACATATAAATTAAACGGCGG 158152 30 100.0 33 .............................. GCATAGGCTACAGCAAATCCCATCAGTGGTTAG 158215 30 96.7 36 .....................A........ GGATAGAAAAGTTTATTGTGAAGATGTAACTGTACA 158281 30 100.0 35 .............................. TAAGACAGCATATAGGTAATCAGATAGGCGTTTCG 158346 30 100.0 35 .............................. ATTAATGCATTTGATAAACTTGCTAAAGAATCAGA 158411 30 96.7 35 A............................. TTCTGACACGCCACAAGGCTTAATAAGCACATAAC 158476 30 96.7 34 ....................A......... GCATTTGCAGAAAGAGGCTTCTCCCTTGTTATTA 158540 30 100.0 35 .............................. AGTACACCTACAAAGGCAGAAAGGCTGTCAGGATT 158605 30 100.0 35 .............................. TTTATTGTAATGTCTGCTTGTATTGGATTATCAAT 158670 30 90.0 0 .....................A..A....A | ========== ====== ====== ====== ============================== ====================================== ================== 61 30 99.7 36 GAATTAATAGTTACATAGTGGGATGTAAAT # Left flank : GGTATATCAGTAATGCTTTATACAGATGATCAGTTGAATAGAATGAACAAACACATATGAGAAAATAATTAGGAGTAGATAAAGGCTACAAGAGCAAGAAAGTTTTAAATATATGCACAATGGGCTAAGTGCTTGCACCTTACTAAAAAGTTTGTAAATTATAAATAGAATTGAGGTAAGACAACATTATGATTAAGTGTTTTTTGTAGGGAACCATCCGAATGAAAAATATATTAAATTGGGGGAATGTCAATAGATGATGTTTGGCTTAAATTAGTACATTAATTATTTTGGAATTATACTATGTTATGAAAATATTGATTTTATAAATTGATTGTCGACTCATTATAGTGTAAAATATAAGCGGGGTCGACAATGGCTCTATTAATATGTTTAAGTTGAATTTATTCAAAATAGCATTAGAAATTTATGTATGAATTTATTAGGTCGACAAATAACTATTTTGGTTTTGAGATTTAAAGCTGTATAAAAACTTACGG # Right flank : ATGACACATGATAAAAGGTTTGATTATTCTTTCTTAAAGATGAACTATCAAACTGAATATGAGGTTATATTAATTTCTCATTTTCAAAGCTAGTTTATAAATCTATCGAGAATAAGAAATATTAATTCGATAATTAATACTATTTATGCAGCAATCAAGTCTTAAATGTATCTTAGAGCTTTTTTTAACAGAGTTAATATTAATATAATGAATCGTAGATATGTAGTAGATTGTAAATTTAGTTTAGAATATGTAATTAATATAAGCAATCCCCTCCACGCAACCAACGCCACCACAATTCCCACTTTTCTGACAACTACAATTGGTGGAATCCACATTTTACAAGGATTATAATACATACATAACAACAGAAAGGACTGACATTATGCTACAGGAGAATCTTATTATGCTGAGGTCGCTTGCGGGTAAGACGCAGGAGGATATCGCAGAGGTTATTGGAATATCGAGGCAGGCGTATGCCAAATGGGAGCGTGGTGAAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGTTACATAGTGGGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //