Array 1 11468-8318 **** Predicted by CRISPRDetect 2.4 *** >NZ_POTY01000060.1 Micromonospora craterilacus strain NA12 NODE_60_length_29921_cov_21.459, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================================================================================================================================================================================================== ================== 11467 28 82.1 213 ......T.....T....T.T.A...... CCCACGATCGCGCCGCGGCGAGGTTGTTACCTGGCGCAGGCGGCCGAACAGCCGACACACGTCTGAACCATCACCACCCGATACGCTGAAGCCCGAACTTCCGCCGCTTCGTACAACCCGGCGCCCTCCAAACCCAGAGGGACCTTGACGATCTTGAATGGCAAAGTGAAGGAAAACGGCGCACTTGATCTTTAGATGCGCAGGTCAAAAAGC C [11463] 11225 28 100.0 33 ............................ GTCTACGATCCGGTCAATCCACTCCCGAACCTT 11164 28 100.0 33 ............................ GCCGTGCCGCGCCTGGGCGCTCAAGCAGTCCAA 11103 28 100.0 33 ............................ CCCACCCAGCGCGATGAACCCGAGCGGCTCCCA 11042 28 100.0 33 ............................ TGGTCGCACCGACGCGCCTACCGAGTGCTAAGC 10981 28 100.0 33 ............................ CCAACGAAGGATTTCGTCCTGGACGGCGCGAAC 10920 28 100.0 33 ............................ CCAGCGGAAGATCCGACCATTGCGGCGGAGTAC 10859 28 100.0 33 ............................ GCTGGCCACGCACACCCGCAGCGGCGCCGACGG 10798 28 100.0 33 ............................ CAGCGGCCGGATGATCTCGTGTTCCTGCCAGGT 10737 28 100.0 33 ............................ CTGTGTCAGCAGGTACGGCAGCTCGGCGGCACC 10676 28 100.0 33 ............................ CGCAACTGGTCAGTCGACGCCCACACGAACGGC 10615 28 100.0 33 ............................ GCTGCCGCTGCCGCTCTACGAGCGCCTCGACAA 10554 28 100.0 33 ............................ CATCGAGTTGAGGTAGACGACCTGGTGGTCGTA 10493 28 96.4 33 ........................G... CCCGGATGCGTGGCTGTCGGAATGTGGGATGTC 10432 28 100.0 33 ............................ GTTTCAGGCAATGATCGCCCATTACAGCGAAAA 10371 28 100.0 33 ............................ CACCTGGTCCTTGTCGTTCCACTCGACGTCCCC 10310 28 100.0 33 ............................ CAGTACGCCCGGCGCGCACAGTCCCCGGCGGAC 10249 28 100.0 33 ............................ GGGATCCCCGCGTCGACCAACGTGGTCGGCGTG 10188 28 100.0 33 ............................ CATCGTCGCGGCCGAAAACGCGCTGACGGGCAC 10127 28 100.0 33 ............................ GTACCTGGAGACACCCATGCACGACCCCGTGGC 10066 28 100.0 33 ............................ GCCGAACGAGCCGCCGGCCGCGCCGGTCCCGGT 10005 28 96.4 33 ..............T............. CTCGACGCCCCCGCCGTCGCTGGTGAACCGGTC 9944 28 100.0 33 ............................ CTGGCGCACACTGAAGTGCGATAACTCGGGCCC 9883 28 100.0 33 ............................ CTGCTCACACATCACCTCGGCACTGCTGCTCTG 9822 28 100.0 33 ............................ GTAGTCCGTGGGCCGCGGCGAATTGGCGTAGGC 9761 28 100.0 33 ............................ CCTAGATTTCTAGGTCAACCAGGCCGTTGAGGT 9700 28 100.0 33 ............................ TGCGCAGCCGCACCCGCACGGCCCGGGCGGACC 9639 28 100.0 33 ............................ CTCCTCGCCGGAGCTGATCCCGTTCTTGTCGTA 9578 28 100.0 33 ............................ CGGTGGAAGCGGCTCGCCCTGGACTTCGGCTGC 9517 28 100.0 33 ............................ CACGACCTGCAACCGGCCGTTCTGGTGGTCGCC 9456 28 100.0 33 ............................ GTTCAGCCGGATCCGCGGATACCGGGCCTCGTC 9395 28 100.0 33 ............................ CTCGCAGCAGATCGTTCGGGCGTTGGCGGAGCG 9334 28 100.0 34 ............................ CTCGCGCCCCCCCGGGATCGACCACGCCACCTTG 9272 28 100.0 33 ............................ TCTCCGCCGATCCGATTGGTCGGGCATGTAACT 9211 28 100.0 33 ............................ TCAGCCGGCGTCCGGGTGGGCCGGCGTGCTGAT 9150 28 100.0 33 ............................ CGAGCAGGCAGACGCGGCCGGTCCGGTAGGCCA 9089 28 100.0 33 ............................ GTGGGAGCGCGGCGAGCGGACCCCGTCGACGCT 9028 28 100.0 33 ............................ CTGGATGGTGTCGATCACGTTGAACGGGCCGTT 8967 28 100.0 33 ............................ CTGGATGGTGTCGATCACGTTGAACGGGCCGTT 8906 28 100.0 33 ............................ CTTGTAGCCGCCCTTGTCGGTCTTGATGTCGGC 8845 28 100.0 33 ............................ CGCCATCCTCGGGCTACTCGAAGCCCGCCACAC 8784 28 96.4 33 ..............G............. CCAGCCGAGCGAACAGCCGGCGGGCAAGCCGGC 8723 28 100.0 33 ............................ CGTGGATCTCAACTTCCGGGTTCCGATCGCGTT 8662 28 100.0 33 ............................ CCAGATGGACCCGCCGAGCTTGCCGGCTGCGTC 8601 28 100.0 33 ............................ GGATCCGGTGGGCTGGGTGCGGGGCAAGGTCGA 8540 28 100.0 33 ............................ CAAGATTGGGTGGTACCTGCGGTGAGGCTCAAG 8479 28 100.0 104 ............................ GCGATCAGCACCACGTGTCCCGCACCGGGTTTGATGGAGACATCAAACCCGGGGCTTGACAGGGGAGATCCGCGGACATGTCGAGCCGCAGAAATCGAAGACTT 8347 28 78.6 0 ........T........C.T..C..A.G | AA [8324] ========== ====== ====== ====== ============================ ===================================================================================================================================================================================================================== ================== 48 28 99.0 38 CTGCTCCCCGCGCACGCGGGGGTGATCC # Left flank : GGCTCGGCCGACGCCAGCGCCCGCATTTGGGCCGCCAACCCCGACCTCGCGGCGTTGACCGACGCCGCGCGGCACCGGGTGTTCCGGGCGCTCACTGCCGACGAACGCCGCGCCCACCTGCTGCCGGTCAACGAGAGCGGCTAAAGCACCTGCTCCACTGTGCGGACCTCCTCGCCAACGAGGAACTCCCCCGGATCCAGACCGAGCTGCTTCCGCTGCGGCGACGCCCAGTACGCGGCGTTCGCTTCCTCGAACGACTGGTCTCCGTCGTACGAGATGACCCAGACGTGGGCGTCACGCTCCCGGTCCACCCACGACCCGTGGACCTCGAAACCGAACTCCCGCCGCAACGGCACAACCAGGGTCCGCCACGCCTGCACCCACTCGTCCAACCGCCCCTTGCGTACGCTGTAGGTGCGAATCTGCACAGTCCTCACGGCATCTCCATCGTGTCCGGCCACGGGCGCTGCCGCCCGGCGCAACGTGCGCCGCCGCCAGCC # Right flank : CGTTTTCCCCGTGTCGTGGGGAAGTTCCCTGCCGAAGGTTGAATGGGTAGCGTCGGGTCATAGGCGTCGATGGGTACGGCTGAATCGGGGACGGTGGGGTGTCCGAGGGAAGAGCGGAGAGCCTGCGTCAGCAGCAGGCGGCGCTGGCTGCCGAGTTGCGGTCGGCGGGGAAGACGTGGGTTGAGGCAGCCGAGATCTTCCGGACGAGGTTTCGGCTCAATCCGCGGGTGGCCCTGCGGGCGGTGCGGGGATGGAGCCAGGCGCAGGCGGCCGAGGAGTGGAATCGGCGCTGGCCCCACGAGTCCAAGACCTTCAAGAATTTCTCCTATTGGGAGATCTGGCCGGGCAAGAGTGGCCACTCGCCGTCACACGACAATCTGGCCCGTCTGGCCGAGATCTACGAATGCAGCGTCGCTGACCTGCTGGCCGACCTGCCGGATTTCCGTCACCTTGATTCCGCCGCCCGGACGTCCTTGGCGGTTTCCTCGGACTCGACCGGC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.36, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.87 Confidence: MEDIUM] # Array family : I-C/E [Matched known repeat from this family], //