Array 1 3656532-3655663 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP012331.1 Alcanivorax xenomutans strain P40 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
   3656531	    28	 100.0	    32	............................	TATCCCGGCCACAATCGTTCCGATTGCAACCG	
   3656471	    28	 100.0	    32	............................	AATCTTGGCGATCAGGTCAACGGTCAAACTAC	
   3656411	    28	 100.0	    32	............................	AAGACCGCCGGCCGCCTCTGACGACCTCAGAA	
   3656351	    28	 100.0	    32	............................	ACATCGACGCCATCGGCATCCGAAGGGCTGCG	
   3656291	    28	 100.0	    32	............................	TTGTCCCCGGCGCCCAGTACAGGGCAGGGCAC	
   3656231	    28	 100.0	    32	............................	AGAATCCCCTTTTCCACGCCGTAGTCCAGGAC	
   3656171	    28	 100.0	    32	............................	ACCCAGTCACGCCGTGGTGTACGGCTGCCACA	
   3656111	    28	 100.0	    32	............................	TTTCGGAATCCCGGTTCCGCCGGGGCGGGAAA	
   3656051	    28	 100.0	    32	............................	TTGTCCAAGATCCGCGCGCCGGCGGGCCTCTC	
   3655991	    28	 100.0	    32	............................	AGCAGGTGGTCCCGATCTGCTCCGCCGGTGAC	
   3655931	    28	 100.0	    32	............................	ACCGACGGCCATCAGCCATCACCAGCACTCCA	
   3655871	    28	 100.0	    32	............................	GTGATGCGGTCCGCGTATTCGGTCCACATATC	
   3655811	    28	 100.0	    32	............................	GATCGCGGCGGTGATGGCTCAGATCAAGAGGA	
   3655751	    28	 100.0	    32	............................	AGAGCAGCGATGAACGCATTGGTCGGCCGAAG	
   3655691	    28	  85.7	     0	.............T......GG.....G	|                               	G [3655667]
==========	======	======	======	============================	================================	==================
        15	    28	  99.0	    32	GTTCGCTGCCGCGCAGGCAGCTAAGAAA	                                	       

# Left flank :   CGGCTCTGGATCATTTAATGAGTCAAGATTGTCTGGCCGGCATGCGTGACCATATCCAAATGACAGGGTTGGCTCCGGTGCCAGGCAATGCCAAGCATCGTGTGGTCCGGCGCCGCCAATTCAAGACCAATGCGGAACGTCTCCGGCGTCGCCGGGCGCGGCGTCACGAGGAAACTCTGGAACAGGCTCGGGAGCGAATCCCAGACACGGTGGAGCGCAAGGTTGATTTACCCTACGTGACGCTGCGTAGCCAGAGCACGGGTCAGGACTTCTGCCTGTTTATAGAGCACGGTGACCTGCAGGCACACCCGGTTACGGGCCGCTTCAGCCGCTATGGCCTCAGCCCTACCGCAACGATACCGTGGTTCTGACCCTTTTTTTGATTCCAATTAATACTTTCCGAAAATCAATAACTTACGTCACGCTCCAAAATTTGGGGTGTGGCGCTTCTTTTTAGCCTTGTTCTTTAAAAATCAGGGAGTTAGATTCGTTTGGTTCTA
# Right flank :  TCCAGGCCATGTTTATTGATAGTCATAAAGCTGTCTGCTTTGAAGCAGGGGGTGAGTCAGGGCGCGAGGGAGAGGGGATTCTGAAGGCATGAGTTGAGGCCGGTATCATTGCCCTTGGACCGCTCCCACAAGACGATCTTGTGAGAGCAGTTAGGCAGAGTGCCTGATTAACGATACCGCGCCAGTTCCAGCCGTCCGATCTGGTTGCGGTGCACTTCGTCGGGGCCGTCGGCCAGGCGCAGCATGCGCGCGTTGGCGTAGGCTTTGGCGAGGCCGAAGTCGTTGGTGACGCCGCCGCCGCCGTGGGCCTGAATGGCCCAGTCGATGACACGGGCGGCCATATTGGGGGCGGCCACCTTGATCATGGCGATTTCCTTGCGCGCCACTTTGTTGCCGACGGTGTCCATCATATGGGCGGCGTTGAGCACCAGCAGCCGGGTCTGATCGATGAGTATGCGGGATTCGGCGATGCGTTCCAGGGTCACGGTTTGTTCCGCCAC

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCGCTGCCGCGCAGGCAGCTAAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCGCTGCCGCGTAGGCAGCTAAGAAA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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