Array 1 7722-7266 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPHP01000011.1 Agrobacterium vitis strain CG957 CG957_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7721 29 100.0 32 ............................. TTCGTGGTCGGTGAATTTTGCATCGCTTGCCG 7660 29 100.0 32 ............................. GCGACGGAGGTGAGTGCGGCTTTCAGCCCCGA 7599 29 96.6 32 ....C........................ GTTGGCGCGTCATCACCGGCAACTGGGGTCAC 7538 29 100.0 32 ............................. TGACGAGGCGCTGGCGGCGGGCGGGTTGCTAC 7477 29 100.0 32 ............................. GATCTGGGGTCGCCGCTGTGGTCGGCGACTTA 7416 29 100.0 32 ............................. TTCTGCAGGAACACGAACATCACGATGAACAC 7355 29 100.0 32 ............................. GGCGCATGGGTGCCGCTGGAGCTTGTGAAACC 7294 29 86.2 0 .....................CCA..T.. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 97.9 32 GTGTTCCCCGCATACGCGGGGATGAACCG # Left flank : GGCACGCGGCTGGGCGAAAAAAGCGTAACGTTGCGGCTGGCAAAACAGACCGGTTCGACGCTTGCACCGCTCATTTGCCGGCAGGGCGCTTCCGATACTGTGAATTGGGCGCTAAGCGAAATTTCCGTCCGATATCGCTGGCTTGCCGGCAAGGGCGCATCCGACCATTCGCCGCTGCCAACCGCAGCCTGTGCCAGCGTGATTGACGCTATGCGCACAGCCTGGCCCGAATGGGAGCGGACCATGCCGCTCTACGCGATTGACAAGGATGGCAGTCTGCTGACCACGGGAGAGCACGGATTGAACTATAGCAGCAAGGCAGGTTTACAGCGCCTGGATGGCGTAGCTGCGCAGGCGGCGGCGCTGCCTGGAGATGGATAAACTGTGCCTGTTGAATAGTCTTTGCAAGAGTGCGGGCACGAGAGAGATTCCGGGCTTTAAAAATTGGTGGACAAACCGACGGAGAAATTGTCAATAGAATTCATTGGCTTCCAGGAAGA # Right flank : TTTACGACGCTTAATTGTAAAATTTTGCGGTCCAGGGCAATACCCTTCTTGACGCGCCACAACTCAAGCGGATAATTTCAAAAAAATTCAATCAGAATTATTAAATACTATATCGGAACTGCGTACTTCGGGGGGAGTACATTCATGTCTGTTGACGGTGCGTTTAATCTTCTCACGGAGCCGTTTTTTCCGGTTGTGACTGTGTCTGGCGTGCGCCGTTGGGTGTCGTTTGAGGGGTTGCGGCAGGAGGAGGGAGATTATCCGGTTGCCTTCGACTGGCCGCGCAGCGATCTCAACATTGCCGCCTTCGAGTTTGCCGTCGGTGTGTTAACGCTTGCCTATCAGCCGGAAGATCACGGCGACTGGGTGGCGATCTGGCGCGGAAAAAGCGATGTCGCTCTTTCCGAGCGGCTGGCCGCACTCGCCTTTGCCTTCAATCTGGTGGGGAGTGCTAAGGGCAGTGGACCGTCCTTCCTGCAGGATTTCGACCTCATTAGCGG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //