Array 1 19388-25060 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWSU01000249.1 Xanthomonas translucens pv. poae strain B99 Xt_poae_B99_Contig_56, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 19388 31 100.0 37 ............................... ATGTTGACCTTAGCCGCCTTGCGCACGGCATCAACCG 19456 31 100.0 35 ............................... CACAGAGACCAGACGTAGGCCACGACCGGGAAGGT 19522 31 100.0 33 ............................... TCCACGGTCACCTCACAGAAGGTCGCTGCCAGA 19586 31 100.0 35 ............................... GGTACTACCGCCGCCCCCAGGGATGCGACAGCAAG 19652 31 100.0 33 ............................... CCGTCTGCGGCACCTAATTCACAGCCGTACCTG 19716 31 100.0 36 ............................... AGCTGCTCGGAGTTCATCGCGGCGGATTACCTGGCG 19783 31 100.0 34 ............................... AACGTCATCAAGGCGGCCGGACACTTTTCCTATA 19848 31 100.0 34 ............................... TGCGGCGCGCCGTCGGCGGCGATTACAGCCGTGC 19913 31 100.0 35 ............................... CGCGACAGCCCAGCAGCGAAGGCGGCGCAGTGGCG 19979 31 100.0 34 ............................... CGGTTGAACATGAAGGGGGCGACGATGGCGCCGA 20044 31 100.0 35 ............................... CCCTTCATCCTGCAGACCGGCGCATCGCCGATCCC 20110 31 100.0 36 ............................... CACCCATCGAGAACACGCCGGCACAGCCGGCAGGAG 20177 31 100.0 33 ............................... CACGCATGGGAGGCGTACTCCCTGTTTCGCCGT 20241 31 100.0 36 ............................... GAAACGATCCTGTCCGCAATTGTTGCGGATTTTGTC 20308 31 100.0 34 ............................... CGAGGGGCGCTATCGCAGGTCAGATTCAGTCTAT 20373 31 100.0 35 ............................... ACCCAGATGTTGGGCCAGATGGGGCCGGGCCTGCC 20439 31 100.0 37 ............................... TCCTGAGCAAGCCGAGGCGGCGGGCACGCGCACGCCG 20507 31 100.0 34 ............................... AGGTGCTCGGACTCTTCGAACTCCGGGACGAACC 20572 31 100.0 35 ............................... TCGAACTCGGAAGCGATCCCGATTTCCTCGTCGGC 20638 31 100.0 34 ............................... TCGCGCTGTGGAGGATAGGCTCGGATATACAATT 20703 31 100.0 35 ............................... TCGAAGAACGTAAAGCCCGCGAAGTCGCCGACCGC 20769 31 100.0 34 ............................... CTGTACCGAATGACGACGTACCCGATGCTGTTTC 20834 31 100.0 35 ............................... CTTGCGCTTCGCGACCAGCTTGTCCAGCGCGAGGC 20900 31 100.0 34 ............................... ACGCCAGCCAGTGCGCCGCCGGCAGACTGCCCCA 20965 31 100.0 33 ............................... GCGATGCCGGCCAGGCCGGCGCCCAGCTGGCTG 21029 31 100.0 33 ............................... ATGTTCAACCGGAACCACCGCGCCGCGTATGAG 21093 31 100.0 34 ............................... CAGCTGAAGGCCGCCGCCGCCGGCCTGCAGCCGG 21158 31 100.0 33 ............................... TTGCGAATCGCCTTCTGGATTGCGCCGGTGGAG 21222 31 100.0 36 ............................... CCGTAGATGACGCCAAGCACTGGATCGCACACGTAG 21289 31 100.0 38 ............................... CACTGGGCCGCCGCCGGGTCCGCTGATCTCCTGCGACA 21358 31 100.0 34 ............................... TCGTGCTCGGGGTGGTGCTCGTCCTTCGCCGCCG 21423 31 100.0 35 ............................... TTGCCGCCGCTGTATATCGCTGCCTTCGGTGCGGT 21489 31 100.0 36 ............................... TTATTAAGCGTTCAGCGCGCGGCCCGCGCCAAGGTC 21556 31 100.0 35 ............................... ATTTCCGCCGACCTCACAGGTAACGTAGGACCGCG 21622 31 100.0 34 ............................... ATAAGTAAGCGCGCTGCAGTACGTCCTCCGGAAA 21687 31 100.0 33 ............................... CGGAACGCCCACGCTTGCGGGCTGGGGTATCCT 21751 31 100.0 33 ............................... TCGTATCCGCTTTCGCGACGTCAGCGTTGGCAT 21815 31 100.0 35 ............................... TGCCGGATGATCGTGGAGACATTCTTAGCGTTAAG 21881 31 100.0 35 ............................... TTCGTGATGCCGCGATCCACCGCCCACAAATGTCC 21947 31 100.0 35 ............................... ATTGGTCGTGACGTGGTATTTGCAGACGCAGCACA 22013 31 100.0 35 ............................... GAGGAGTTCGGTGGCTTGTTCGCCAAGGGCCAGAA 22079 31 100.0 37 ............................... TTGAAGAAAGGTGCGCGGCAGCAGTGGGAGTCGCGGG 22147 31 100.0 33 ............................... AAGAACGACACGGGCAGCGCGAAAGACCTTGCG 22211 31 100.0 35 ............................... TTGACGTTAGGCGAGTCCGCAGAGCGCGCGGACAC 22277 31 100.0 35 ............................... AAGGGATTGCCGTGCTACGACTACGCCGCATCGAA 22343 31 100.0 35 ............................... AGCCGGCTGCGCACCGAGGAGCGGCACTTCGTGCA 22409 31 100.0 35 ............................... GTCGGCGCTAACGCGATTGTTGCCGCTCTGCTGCG 22475 31 100.0 34 ............................... GTGTTTTGCCGCTACCACTGATCCCGGCGAAGTT 22540 31 100.0 34 ............................... GCGGACACGTTCGGATGGCAGGAAATCACGATCA 22605 31 100.0 33 ............................... ATCGTGTGGCGCGTTGAATTCGTGATGACCACA 22669 31 100.0 35 ............................... ATCGCGACGGTGACCACGATTTCCGCTGTCGTCAA 22735 31 100.0 34 ............................... AGGGGCTTGGCGGCGGGTCCATGATCGGGCCAAA 22800 31 100.0 34 ............................... ACAAGCTAGAGGCGATTAAAGATGGCTGCATATT 22865 31 100.0 33 ............................... AGCTCGAAAAGCGAGTTATCGCCGCTCTCTCTC 22929 31 100.0 33 ............................... CTTGTAATACGACAGCGCCATCGAAATCTTAAG 22993 31 100.0 35 ............................... TTCCGGCATCTGGCGCAGAGTGTGCCGCCTCCCGC 23059 31 100.0 34 ............................... CGCCTGCCTGATTTGCGTGGAGAATTCGTCCGCG 23124 31 100.0 33 ............................... GACTTATGGCGACGGTATTGATATCACGGTTAT 23188 31 100.0 35 ............................... AGGATGCACCTGGTCAACGATTACGTAACGGAAAT 23254 31 100.0 35 ............................... CTGACCCCGTGGGCGCCTGCAAAAGCACTCGGCGG 23320 31 100.0 36 ............................... GCGGATAGTGCTCCCGTGCCCTGCGCGTCTGCTATC 23387 31 100.0 34 ............................... ATCACGTTTACGCTTACGCCGTGGATTACTCGCA 23452 31 100.0 33 ............................... ATGTAGTGCGCGATGACCTTGGCGGTGGTGTTC 23516 31 100.0 35 ............................... TGACGGCCGTCCATCGAATGCTGACGCGTCACGGG 23582 31 100.0 35 ............................... CCGAAGTGGGCACCACTGCCTCAAACGGGACGGTG 23648 31 100.0 36 ............................... CGATCCGGACCTTATCACCGGCCATAGCGGCGACGC 23715 31 100.0 35 ............................... GCGTCGTCGGGGAAACGGACGCGAACCACCCAGCC 23781 31 100.0 36 ............................... TAGTTGCTCCGCCGTGAGCGGCTCCCGGTCAGGCTG 23848 31 100.0 35 ............................... ATAGACTCTCTTCGGGCATCCAAACTTTAAGACAG 23914 31 100.0 35 ............................... AACGGTGCGTCCACCAGGGAAAACAGCTGGCTACC 23980 31 100.0 35 ............................... GCGTGCACGTTGTGGTCGAACTCGTAGCTGTTGTT 24046 31 100.0 35 ............................... GAAAACAACAATTGCTGGGCGATGGTCGAGGAGTC 24112 31 100.0 36 ............................... AAAGGAGCGGGACACGCTGCGGCGGCCATACGGCAG 24179 31 100.0 34 ............................... GGGTCTGCGGATGTGAACCGGCTCACTGGCGATT 24244 31 100.0 34 ............................... CGCAGTCCAGTTTCGGGCCGCTGTGTGATTGCTT 24309 31 100.0 35 ............................... CGATATCCCTGGAAGGGCAATACTTGCCGGACGGC 24375 31 100.0 34 ............................... AACTCCGCAGCGAAGCTCAGCGAAGAAAAGGTTG 24440 31 100.0 34 ............................... TACACATACAGCTTTGAAGATGTCTTGCGTTACG 24505 31 100.0 34 ............................... CGGATCGACAGCTTCGCATTGCCGCACAGCTTGG 24570 31 100.0 33 ............................... TTGCTGTGTCCGCGCTGCCCTTGATACGGTTGC 24634 31 100.0 36 ............................... GAAACGGCCATGCTTGGCATCGCAAGGCAGGTAAAC 24701 31 100.0 35 ............................... CTGCATGGAGTCGAAGTCCTAAACATCGACGACGG 24767 31 100.0 36 ............................... CTTGCGGCGGGCGTAATTATTGGCGGGGTTGCTGTA 24834 31 100.0 34 ............................... ATGCACTAGCTTGTGGCATGCCTGGCACAGCCAG 24899 31 100.0 34 ............................... TAGCGCTTCTTCCCCCCCCTCCAAACATGAGGGG 24964 31 96.8 34 ....................C.......... GCGTTGGCAGTTCGTCGCGCTGGTGAGGTTTAAG 25029 31 87.1 0 .....T.........A.C.......G..... | C [25054] ========== ====== ====== ====== =============================== ====================================== ================== 87 31 99.8 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : TGAAAAGGCCGCCGCGCCATGATGGTTTTGGTCAGCTACGATGTCAGCACGAGCTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTCTCGGTCTTCGAAATCGAAGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCGGGCGTCGACAGCCTTCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTTGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCCGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTAAAAGAAAAATATCAACCTCTTCCACTTGCTGGCATGTCCGCGGAAGCCGAATTCGATTGCGTCTCCTAAGGGTTCCGCAAAAGTGCGGACTTTTTCCCAACACCCATCAGCACTTATGCTCAGGGCG # Right flank : CTGACTTGGCGACGCTGTGTCGTTCTATCGCCTTTGCCCACAAAAAAAGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTCCCTAGCGGGACGCAATGCGCATCACTTGACTTCGAATTCCTGCACCGTTCCGGCCGGCTGGCCGTTCACGGTGACCTCGGCCTTGTACTTGCCGGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGTTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACAGCGGTGTTGGTGGAGGAACCCTCGGTCTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAACGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //