Array 1 1346-2506 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKPU01000077.1 Limosilactobacillus reuteri strain PTA6_F1 NODE_77_length_4967_cov_188.497, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1346 36 100.0 30 .................................... CTAGTAAATGGTGGTGGTAACTAATGCCTT 1412 36 100.0 31 .................................... TTCAGTGTCGCCAATAATCGATACGAAGGTA 1479 36 100.0 30 .................................... CGCCGCTCTTTCCAATAAAATAGAGAATAT 1545 36 100.0 30 .................................... CTATGATCGTTAATATCCAGATCCATATAT 1611 36 100.0 30 .................................... TCCCAGTCATAACTAACCATTGTTTCAACT 1677 36 100.0 30 .................................... TTAAGTTTCGACTAACATTATCAAAACTTA 1743 36 100.0 30 .................................... TGGCACTTTCCAAGTAGTAGGTAATGCTTT 1809 36 100.0 30 .................................... CCATATTTTGATCTTGCTAAGCTTACAATC 1875 36 100.0 30 .................................... AATTGACTTCCAATATTGCTATTTCCTGTA 1941 36 100.0 30 .................................... CTCAGTTACTTGAAAAAGAAAAACGAATCA 2007 36 100.0 31 .................................... CCTGCTTCCCTAGCCGCTATTGGCTTGATGA 2074 36 100.0 30 .................................... CGAGTAAGCGGTACGATGAGCTAAGGGCTG 2140 36 100.0 30 .................................... ATTGACTTGTTCAAGTCCTGAATAATTTGT 2206 36 100.0 30 .................................... GGTATTCTGCAATTTATTGATGGTACTTTT 2272 36 100.0 30 .................................... TATCTTTTTGGTAATTACTATTTTGCTTGT 2338 36 100.0 30 .................................... TGTAGTCTTGATATTCAAGTACTTCATCAC 2404 36 97.2 31 ...........G........................ ATAGAACAGCGCATTGGGTCTGACACGTTAG 2471 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== =============================== ================== 18 36 99.4 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCTACGATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTATTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACGGATTTACCTCTCGAAGTTCGTTACGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGCCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATGGTTCATGTATTGGGTTAAGTAATGTTGCTAATTACCTAGATTCAACTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAAATACTATGGAAATGCGGATTTTTATTATATTGACAAGGATTTTGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TAAATATTAGTCGAATTCACGGCTGAGAAAAATTTTAAATATGCTTCAAATTTCCCCGTCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAACTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAATGATGGCGACAATTAAAGAAATTGCGGAAAAATCAGGATATTCACCAGCAACGGTATCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAACGAGCTTGGCTATTGGAACAACCACAAGAAAAACTCTCAGCAGCAACCAATCCGTCCTAACCTCGCATTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTGCGCAATGCAATTATTAAAGAAGTCGATGAGGCGGGAGCGCAAGTTGAAATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCTGATTCGTTCCAAGGATTTATTGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //