Array 1 1909143-1907520 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073915.1 Lacticaseibacillus rhamnosus strain AS chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1909142 36 97.2 30 C................................... AAGAAACGATCCCGAGTTTCTGGATTGCTT 1909076 36 100.0 30 .................................... TCATCAGTATTCATGGAAATATAGGATGCT 1909010 36 100.0 30 .................................... ATCATCGAATCTTTGGGGACCTTACCACTT 1908944 36 100.0 30 .................................... GATTGTTTCGGTTGCTTCTGTGATGCCACC 1908878 36 100.0 30 .................................... ATGACTGGTTGCCGGTAAGCGATGAGTTCA 1908812 36 100.0 30 .................................... CATACTTGTATGAGCACTTTGACTTGTCAA 1908746 36 97.2 30 ....................T............... ACCGTTTGTGTTGCATGAATATGATCACTA 1908680 36 100.0 30 .................................... AGGTGCTATGCCGCTTGGCATGACGATTGA 1908614 36 100.0 30 .................................... AATAATATTGTGCCAAAAGGTAGTATTCTA 1908548 36 100.0 30 .................................... TCCAAGGGCATTCCAGATTGCAGAAGCCCC 1908482 36 100.0 30 .................................... GGGTGATGCTGACAAGATCAAGACGGCTGT 1908416 36 100.0 30 .................................... CGCCTTACGGGCGACAGCTAGGCCTATGGG 1908350 36 100.0 30 .................................... AGATCGAGCATTACGGCTTGCAAGACTGCG 1908284 36 100.0 30 .................................... ACAGTTGAGAAAAGAAAATACGCATTTAAA 1908218 36 100.0 30 .................................... AAAAACACAAATGGCCGCTGCCACCTTATG 1908152 36 100.0 30 .................................... AAAAAAGCCGCGGAACTTCTCGGGCTAGAC 1908086 36 100.0 30 .................................... CACAGTGCCATTCCACAAACCCGACAGAAA 1908020 36 100.0 30 .................................... CGAGCTTGCGGCCAATATCAAGCTATATGC 1907954 36 100.0 30 .................................... GTGTGATCATCATTACCTCTCTGCCACTAA 1907888 36 100.0 30 .................................... ATCGCATACTTCATGATGATTGATGCCAGT 1907822 36 100.0 30 .................................... CTGTGTTCTCACGTGTCAACAATTATTTCA 1907756 36 100.0 30 .................................... TTGTGGTGCCAAAACGGGTTGTTGTCGAGA 1907690 36 97.2 30 ...................................G TTTCAGCAAATATGACGTCTAACATGCCTC 1907624 36 94.4 30 ..................................AT ACTTGGAAAAGTTGCTATGCAGTTTGAATA 1907558 36 83.3 0 .......................AA.A....G..AA | T,CA [1907523,1907529] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.8 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : CCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTATCAACAGGCGTTCAAATCCATTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAAGTTCAAACGGCATAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGTCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCTAAATTGGTACATTTGTATCGTAAAGTCGGCTTTCAGCAGCTGCCAGATCGGGAAACAACGATTAATGAGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //