Array 1 4589-2841 **** Predicted by CRISPRDetect 2.4 *** >NZ_PSZO01000035.1 Mycoplasma marinum strain PE scaffold_34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 4588 36 100.0 30 .................................... TTGAAGTTCTTCAATTTCCTTTGCTTGCTC 4522 36 100.0 30 .................................... TTTCTTTGTTTTTGTATACCGTTTCTCTGA 4456 36 100.0 30 .................................... ATAACGGACTTAATAATTTTGAACGTTGTG 4390 36 100.0 29 .................................... TCTTGGAGCCGATATGAAAAATGGTGTAG 4325 36 100.0 29 .................................... ACCTGTTTGCTGGTCCATAATTCTTATTA 4260 36 97.2 29 .........C.......................... AGAGCAGATATGGTTGACAACCACACTAA 4195 36 100.0 29 .................................... TTAAAAATAATCATAAAAACGATTGTATT 4130 36 100.0 30 .................................... TTCTTTAGATATGAAGTGAGCGGTGCAAAG 4064 36 100.0 30 .................................... CCAATATCAAAAATATTAAAAGTAGGTTCA 3998 36 100.0 30 .................................... TCATTTTCATTAAAGGAATCTACAAAATCA 3932 36 100.0 30 .................................... TAGACCTTGCACTATTTAACAAGGCAATTA 3866 36 100.0 30 .................................... GCGTCATCTTGTAGTGACTTGTTAAAATAT 3800 36 100.0 32 .................................... GCTTAGGAGTGTTATATATATCTATGATACAG 3732 36 100.0 30 .................................... AAAATCTTTATTCGGTCCTAAAAATAAAGA 3666 36 100.0 30 .................................... GAATTAAAAGACTTGAAAGTTTTCACAAGG 3600 36 97.2 30 .....................C.............. TTCATTAAACGCCGAAAACAAAGCGTATGT 3534 36 100.0 30 .................................... GAACTGGTGAATTAGTTCAACGAACAATGA 3468 36 97.2 29 ...................A................ ACAACAACATTAATAGTAATTAATTGGTA 3403 36 100.0 30 .................................... GAATTAAAAGACTTGAAAGTTTTCACAAGG 3337 36 100.0 30 .................................... TTTATCTATAATCTTATATTTCATTGTATA 3271 36 100.0 33 .................................... TTTATAAAGAACCGGTAAACATTATTATTATTA 3202 36 100.0 29 .................................... GAACTGGTTCTACTTTGAAACCTAATGCA 3137 35 97.2 30 ...................-................ ACTCTCTCTCATATTTGTTCATTATAGGCA 3072 36 100.0 29 .................................... AAGTTCAATTATTTCAGTTGCTCTAACCC 3007 36 100.0 30 .................................... TAGGTGATAAAAATTCTTGAAAAACAATGT 2941 36 97.2 29 ...................................T GCAAGATCATAAAACACAAACTCTCGGGT 2876 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================= ================== 27 36 99.5 30 GTCTTGGAGTAGTATCATTCTTATGTATTCTTAAAC # Left flank : TA # Right flank : TATGGATTTTGAAATCATATTTATCAAAATAAAATACCCATAATTTATGGATATAATTTTAATAATCTATTTTTTATCACCTAATAAATCAATATTTACAACTTTCATTTTCATTTTATTAAAAATAACGTCAGCGCTTCCCTTTGGCCTATTAGGCACGTTAAGACTTGAGGTTAGTGATTTATATTCGATTTTCTTTCCTGATGATTCTGAATATCCAACTACAAAAAATCTCTCTCCAACAGGATTTTCTAATATTGACCCTCTCACTAATTTAAGTTCTCTCTTGAATTCAGGATTGATATTTTTGTTTTTTAATTGTTCTTTGAACACATCATTTTTAAGTATCATTCCTTTGCTTGTGAACTTCGCGTTTAAAGAGTTAATCGCGATGACTTGATATTTATCTTTAATATCTTTATAAACTCATCATTCAGTAGATTTTAATGATTCGTAAAACGATATTTTATCTCCACTCTCGTGAGTTTGGATAATTCCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGGAGTAGTATCATTCTTATGTATTCTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTGGTGTAGTATCATTCTTATGTATTCTTAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //