Array 1 39026-39784 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_016785.1 Corynebacterium diphtheriae CDCE 8392, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     39026	    29	  96.6	    32	............................G	CCACCAATCAGCCCTACGAATCGGCAAACACA	
     39087	    29	 100.0	    32	.............................	TCGGAGGAGCGGGCACCGACGTTACGGAGCTT	
     39148	    29	 100.0	    32	.............................	TTAAAATCGGCTCGCTATTTCTCCGGGTACGA	
     39209	    29	  96.6	    32	............................G	ATTGATAAGACAGCGCTAGACCTGCCTGCACC	
     39270	    29	 100.0	    32	.............................	AAGCAGAAGAGCGCGACGGCAATGTGGTTCCC	
     39331	    29	  96.6	    32	............................G	CGTGTTTGATGGAGTGCAGTTCTGGGAATTAG	
     39392	    29	 100.0	    32	.............................	CCGCACCAATCGTTTGTGGATCGGTATCCAAC	
     39453	    29	  96.6	    32	............................G	CACCTGTATAAGTCATTATTTATTTCCCTTTC	
     39514	    29	 100.0	    32	.............................	ATCGGCCGGTAGTGGGTCGCCTTCCGCGCCCC	
     39575	    29	  96.6	    32	......................G......	CAAACCCATTCCCACCAGAATTACGCTCATTC	
     39636	    29	  96.6	    32	............................G	ACGACCGTGGGAACCGCGAGGATAAATAGCAG	
     39697	    28	  93.1	    32	.....-......................G	ACGACCGTGGGAACCGCGAGGATAAATAGCAG	
     39757	    28	  96.6	     0	.....-.......................	|                               	
==========	======	======	======	=============================	================================	==================
        13	    29	  97.6	    32	GTTTTCCCCGCACCAGCGGGGATGAGCCC	                                	       

# Left flank :   CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGCCTGCCAGCCCGAATGACACGCAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCGTAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATGTAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAACAGTAGAAATAAAGATGAAGCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT
# Right flank :  CAGGGACTTTGAGAACTGGACCGCCGTGATTCCTTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGGATCTGTGTTTTCATTCAGAGAAATCAGTAAATGATGGGTCTACTAAAAAATTTTGAAAAAATTAACTTTTAATATCTATAAGGTGTATTCTGTGGAGAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGGTGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCAGCTCAAGACTATGCTGTGATGCGGCTTTTGCTGGGTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCAGCTTGCTCGAAAAGGGAAAGATCAG

# Questionable array : NO	 Score: 5.76
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTCCCCGCACCAGCGGGGATGAGCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-12.70,-12.70] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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