Array 1 5408583-5410111 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059139.1 Pseudomonas sp. MSPm1 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5408583 28 100.0 32 ............................ TCGAAGTCCAGGACACCAACCAGTACGGCATT 5408643 28 100.0 32 ............................ ACCTGCACGAAGCGCAGCAGCGGCACAACGTT 5408703 28 100.0 32 ............................ ATTTCGGGCTTGGCTCGTTTCTCGTTGTCCTT 5408763 28 100.0 32 ............................ AGCTCCGACTGCAGGCGGGCCACGGTGGCATC 5408823 28 100.0 32 ............................ AAGACCAGATAAGCCAGGAAGCACAGGCCCCC 5408883 28 100.0 32 ............................ TTACCAGGGTTACACGATGCACCTGACTGCTC 5408943 28 100.0 32 ............................ CGGATCCCGTCCGCGCCTGTAACGTCCAGGTC 5409003 28 100.0 32 ............................ AGCCATGTACAGACACCTAGCCTCAATACCGT 5409063 28 100.0 32 ............................ TGGCGGATATCAAGGCGGCTGTGCCGCTGAGT 5409123 28 100.0 32 ............................ AGATGTGGAGTACTGCTGAGTCCGCGAGAAAA 5409183 28 100.0 32 ............................ GTAAGGGCGACGACCCTCGCAGTAGCTGGATC 5409243 28 100.0 32 ............................ TTCTCCAGCTCGTCCTTCGCCTGGAAGTCGCC 5409303 28 100.0 32 ............................ TGGAACAGCGTGGCTGAAGCGGCAGAGGGTAG 5409363 28 100.0 32 ............................ TTGATGAAATGGCGAACGACGGGCGTCTCGAC 5409423 28 100.0 32 ............................ CAGGCGTCGACGATCTGCTGATAGTCGGTCTT 5409483 28 100.0 32 ............................ TCCTCCAGCGTCTGCCGCGCCTCACGCAAGGC 5409543 28 100.0 32 ............................ TTTGGGACTCACCTTGTCGCATCAGCCGGAAA 5409603 28 100.0 32 ............................ AATCTCGCGGGTCAGGTCATCCAGAGTCGCGC 5409663 28 100.0 32 ............................ ATCAGCAACACGCAGGTGGCTTCGGTAATCGG 5409723 28 100.0 32 ............................ TTCCCACCCTCCGCATGGCTGGCGAGAAGGGC 5409783 28 100.0 32 ............................ AGCAATTCGGGCCTCAAGAAAGTGCGCCGCTC 5409843 28 100.0 32 ............................ CTGCCGAGTGGCGATCAGCACTATGTAACGTG 5409903 28 100.0 32 ............................ AGCGACGGTTGCCGCCAACGGCAGCGACAGCA 5409963 28 100.0 32 ............................ AGACGATAGCCTCGAAGTCACCCACCCGCCCG 5410023 28 100.0 32 ............................ CGCACGCGCCGCAGCAGGCTCGGCCTTGGCTG 5410083 27 78.6 0 ...........C..........TG.CG- | AA [5410104] Deletion [5410110] ========== ====== ====== ====== ============================ ================================ ================== 26 28 99.2 32 CTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : AGCCAGTACACGCACAGCCCGGCCATCAGCAGATGGCTGATCCAGTTTCTCACCCCGTAGCGCAGCATCCACTCGCCCAGGTTCTCCATGGGCGAGTTGAACATCAGGGTGGCCATCGTGATCAGGATGCCGATCACCCCAACCAACAGCGCAACGCCTACCAGGTAATGTGGCAGCGCCGGAGACTCACGCGTAGCGGCAGGTGCTGACAGCGGGGCAATATCGAAAGGGTTGGCTTGGGTCATGAACGATCCTTGTCGTTAGGTGCATGTATCGAATGTACGCGAGCATAGCCGCCATGCCTTGCAGGCAAAAGCACCGCCCACCGATTGCGTGCGGTAACCCACATGGGCTCGAAACCGGACTGATACCCTTTTTCTGGCCCCATACCCTGGCTCTTTAAAAATCAAGGAGTTGGAGATAGCTCTGAAAAAAGGGTCAAACCGCCAGAGAAGGGCCTCCAGCGTTGAGAAACAGCAACTTGGGCGCTATCGTCTCTA # Right flank : GGGCTGTTCGCTTCGCTCCTGAGCCCGCCCTACGCTGGTATTGGTGTCCGGAACCAAGCAGTTCGTCTAAGCGGGATCGCAGATACGACTCGCTGCCGCACGGCCTTTCACACGTCCAAACCACGAAACATCACATGGCAGTCCACCAGCCCATGTCGCGCATGGCGATAGGCCTTGGGCAGGGTGCCGACGATTGCGAAACCGTGCTTCTGCCACAGCGCCACGGCGACCTCGTTGGTCGAGACCACGCTGTTGAACTGCATGGCGCTGAAGCCCAGTTGGCGGGCCACGTCCAGCGAATGGGCGCAGAGCCGGCCGGCGATGCCCTGACCGCGGGCGGCGGGAGCGGTCATGTAGCCGCAGTTGCACACATGGTTGCCCGGCCCGGCGGCGTTGGCTTTGATGTAGTAAGTGCCAAGTATCTGCCCGCCCTGCTCGGCAACGAAGGTCGCGCGTGGCAGTTCGACCCAGATCTTCCAGGCAGTTTCACGATCCATGTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //