Array 1 66473-64554 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIW010000008.1 Lactobacillus acidophilus strain s-4 Scaffolds_8_86214, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 66472 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 66411 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 66350 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 66289 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 66228 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTCGGCAGAG 66167 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 66106 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 66045 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 65984 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 65923 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 65862 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 65801 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 65740 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 65679 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 65618 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 65557 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 65495 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 65434 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 65373 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 65312 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 65251 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 65190 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 65129 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 65068 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 65007 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 64946 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 64885 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 64824 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 64763 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 64702 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 64641 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 64580 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 32 27 98.8 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //