Array 1 24880-18324 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADGIJ010000046.1 Desulfuromonas acetoxidans strain N3 NODE_67_length_29374_cov_8.184897, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 24879 29 100.0 32 ............................. TTGATGACTTTGTTTGTCCAAGATGAAAAAAC 24818 29 100.0 32 ............................. AGATAGTGAAATTGCTGTCGTCTGAAATAGCT 24757 29 100.0 32 ............................. CATCCTACGAGTTACAACGCAGCTTAGGCATA 24696 29 100.0 32 ............................. ACACATTTACCTTCACCGACGAAGAGCGCGCC 24635 29 100.0 32 ............................. AACTGTTTTACGGATCACTGGTCGAAAGCCTC 24574 29 96.6 32 ...................A......... TGGCTGGAGGGCATCGGCTTTGCGCCTGACCC 24513 29 100.0 32 ............................. GCATTGCCAATGCCGCAGCAGACAGCACCGGG 24452 29 100.0 32 ............................. TTTTTTGGATTCTGTACGGAGGTAACGACCCC 24391 29 96.6 32 ............................A TCAGCACCGTGGTGGTGGCCGATGCGGAAGCC 24330 29 100.0 32 ............................. GCGAAGCCGGGTACCAGGATGCGCTCGACGAC 24269 29 100.0 32 ............................. CCCGTAATCGTGATGGACAAGGCAAAGACGGT 24208 29 96.6 32 ............................T GGGGTAGCGGTGGCAAGAAAGCGGTATTTTAC 24147 29 100.0 32 ............................. CCCAATATCAATGGCGGCTTGGATTTCTGACA 24086 29 100.0 32 ............................. TTGACGTTGAGATAACTACTGACCGCGCCTTG 24025 29 100.0 32 ............................. ATGCATTAAAGGCTGTCGTAAACGAGTGGGCA 23964 29 100.0 32 ............................. TCTCAACAGCCTTAAGCGTGGCTGAAAATTCA 23903 29 100.0 32 ............................. GAAGCTGTGCAGGTGGCGGCTATGGGGCTTAA 23842 29 100.0 32 ............................. CGATAGTCAACTGAAGTTTGCACAGGACTATA 23781 29 100.0 32 ............................. TTCTTCCGTAACAATCAAAATAGCTCTGACAG 23720 29 100.0 32 ............................. ATTGAGGCGCAACAGCTTCGGTTTGCACAGAC 23659 29 100.0 32 ............................. AAATAGCGCAGAACGTCGCCGCCATGCGAGCC 23598 29 100.0 32 ............................. CTAACCCCCTGCATCCTGACCAGCGGGGCAAA 23537 29 100.0 32 ............................. TACCTGTATCAACTTTGGGGATCTCCAGAACT 23476 29 100.0 32 ............................. TCTGGCATTGCGCTAAACGATACGCTACAGTT 23415 29 100.0 32 ............................. CGCCCGATGAAGGAAAAGAGGAGACCGAAGAA 23354 29 100.0 32 ............................. GTCTATCTCTTGCCCGCTATCCTTCCGCGTGG 23293 29 100.0 32 ............................. TTGGCAACGCTTGGCTGGGCGGGGGCGTTGGG 23232 29 100.0 32 ............................. ACCTGCTGTAATTAAATATAGGAATTTTTGCG 23171 29 100.0 32 ............................. CGGTTAGCCATTTTCTTCATCCTCCATGCTGG 23110 29 100.0 32 ............................. CACAAAAGAGGCGCTTAAAATGGAAATTCAAG 23049 29 100.0 32 ............................. CTCTCTGCTAGTTTCAACGCCTGTCCGCTGCC 22988 29 100.0 32 ............................. AAGACAAACAGCACCAAAATGAATCTGGAATA 22927 29 100.0 32 ............................. ATAGGGAGGCGCGCCAAGTTGGAATCGCAAAC 22866 29 100.0 32 ............................. AAAAAACGTGCAGAGATGGATGGACAACCACA 22805 29 100.0 32 ............................. TCCCTGCATTTCTGGCAGTATTCGCACTCGCG 22744 29 100.0 32 ............................. ATGACTGAGCAACTTCTTCCAACCGTCAACAC 22683 29 100.0 32 ............................. AAGTATTCTGGACCTCAACACCGGAGCCAGTA 22622 29 100.0 32 ............................. TGATTCTCCCGGCCAATCTCTGGCGGTGTTTC 22561 29 100.0 32 ............................. TTGCGGTTTGGCATCAAGAGCGGCACCGACTG 22500 29 100.0 32 ............................. CACTCTTCGAAACCCCGGCGAAGATCGTCGCG 22439 29 100.0 32 ............................. CCCCGGAGCGATCCGGGGCCGTTGTGTTAATA 22378 29 100.0 32 ............................. GGATATAGCGGAAATCCATCAGTACATCAGGG 22317 29 100.0 32 ............................. GCACGGATAATGCTGTACTCCTGATCTTCACG 22256 29 100.0 32 ............................. TATGGAGTGGAACCAGGGTCAATTTCTTATGA 22195 29 100.0 32 ............................. GCCTGCAGCCAGCAGGATGTCATCAAACACGT 22134 29 100.0 32 ............................. TTTTTCCGGTAGCTCAATTACCAGTTCATCAA 22073 29 100.0 32 ............................. TTGATGTTGATTGACCCTCCACCACCACCCGA 22012 29 100.0 32 ............................. GATTAACTCGGGCGCAAGAGCTTGAGGCAGGG 21951 29 100.0 32 ............................. GCGTCATGGAGAACTGTTAGATTCGAAGGTAT 21890 29 100.0 32 ............................. ATACGCTAAACACTGCGATTGAGTATGCTGGT 21829 29 100.0 32 ............................. TAAAATAGGGCCAGCACTTGCGCTTGCAGGTG 21768 29 100.0 32 ............................. TAGGTATAGATGTAGTTAGTAGCGCAACGCCA 21707 29 100.0 32 ............................. TAACTCCGTCAACAGTAACCTCAACCTCGACA 21646 29 100.0 32 ............................. GTACGGCAAGCAAGGCGGGCGCCGCAACAAAG 21585 29 100.0 32 ............................. GTCTGTCATTACTGGCTTTCTTGCCTCCTTTT 21524 29 100.0 32 ............................. CCATCCCGTGATCTCTTGCTCTAATATAGTCA 21463 29 100.0 32 ............................. GATCATTTTAAGGGCGCGCCTGGTGCTGTATC 21402 29 100.0 32 ............................. CCGCCAGTTCCAGAGTGGTCAAAGGACGGTGC 21341 29 100.0 32 ............................. TATTGGTTAGGTTTGGACCTGCCGCTTTGCCG 21280 29 100.0 32 ............................. AGCGCGAAAAGAGTTCACAGACGAACAGGTTA 21219 29 100.0 32 ............................. GTAGGTGTTGCAATGATCCACCCTGAAAACGT 21158 29 100.0 32 ............................. TGGTACGATGCCTCAGCATCACAGCGGTGGTA 21097 29 100.0 32 ............................. CTTTTCACCCCACCAGATACCACCCAAATTAA 21036 29 100.0 32 ............................. ATGATCCTGATTCCGGTGCTGTTCAGGTTGCT 20975 29 100.0 32 ............................. TGGATGGCGTTCACGTTGCGTTATCCTGAGCA 20914 29 100.0 32 ............................. TTACTCAGGTCAACGGCTGTCATCAAATAGTT 20853 29 100.0 32 ............................. CGGAGATGCTTTGTGTGTTCCCACTTGCGAGC 20792 29 100.0 32 ............................. ACACCATCCTCTGATCCGATTGGGCTGACTGA 20731 29 100.0 32 ............................. AAATTTAGTTCTTCTGCTCTGTCGATAACGTC 20670 29 100.0 32 ............................. TGTTCTTCACAGCAGTAGCCTTTATCTCCACA 20609 29 100.0 32 ............................. GAGCCTAAACAGATGAGCGCAACAGCACACGA 20548 29 100.0 32 ............................. GCTCAATTGTTTGTGCGACCAGATAGCTTGGT 20487 29 100.0 32 ............................. TTTTGAGTGGTAACCCTTCACATCTTGATAAG 20426 29 100.0 32 ............................. CATTCGAAGTGCCATAATCTATTGAACATCCA 20365 29 100.0 32 ............................. CTATCATCCTTTGTTGGCGTCTTTGTTCTCAA 20304 29 100.0 32 ............................. GCTCAATTGTTTGTGCGACCAGATAGCTTGGT 20243 29 100.0 32 ............................. AATAAAACGTGCGTCCTCTTTAGGGATTCCGC 20182 29 100.0 32 ............................. TTCTTGCTGTTTAGGTAAACCTCTATGCCTTT 20121 29 100.0 32 ............................. TCTGACATATCAATACTCCTTATTCTGGTAAA 20060 29 100.0 32 ............................. TGGGACTACTACCAGGAATTCACCAAATTTCA 19999 29 100.0 32 ............................. CTTGAACAAGAAAAAGCAGAGCTTGCACGTCT 19938 29 100.0 32 ............................. GTTTTCCCAGACCTAAATAGCATCCGACGCGA 19877 29 100.0 32 ............................. CTCGTTGACCTTTTTTATCACGGCAGACAGGT 19816 29 100.0 32 ............................. TTCACAACAATGCCAGCCCCAGACACGCGAGC 19755 29 100.0 32 ............................. GGGGCCGACCATGACCCTGAAGCTATGTCCGT 19694 29 100.0 32 ............................. CTTGGTGCCGATGACGGCATCAACGCTGTCGA 19633 29 100.0 32 ............................. ATTGAGGATGCCACGCAGCGCGGCTTTAATGC 19572 29 100.0 32 ............................. TCGTCACGCTCCTTGACAACCTCATCGAATAA 19511 29 100.0 32 ............................. ACGTGCGGCAATTTTCATACCGCTTGTCATGG 19450 29 100.0 32 ............................. CTCATCAACCTTTTTATTGACAAAATCACGTC 19389 29 100.0 32 ............................. GCGGTCATTTTGCTGTCGTCTCTCCGGTGGTC 19328 29 100.0 32 ............................. CACCTGACTGGCTAAAATCATGGACAGACTGT 19267 29 100.0 32 ............................. GTGCGATATTGCTTGCTGATTCATTGAGAGCC 19206 29 100.0 32 ............................. TCGAGGCCACCATCAACGGCAACGTGTTTAGG 19145 29 100.0 32 ............................. AGGTTTTTTTGGCGTTGCTCGAAGAATCAAAC 19084 29 100.0 32 ............................. GATTCAAAATGACCCTTTTCGGAGAAATAATC 19023 29 100.0 32 ............................. AGCGCTGAGGGTGCTTCGGTGATGGAGCAGAT 18962 29 100.0 32 ............................. AGAGCGGCCAGTGACCACGCCCAGAGGTTGCC 18901 29 100.0 32 ............................. CCGCTGGAACTCATTTTGTCGCCAAGACGATC 18840 29 96.6 32 ............A................ ATGATTGCCGGGTCGCGTCGGATGCTATTCAG 18779 29 100.0 32 ............................. GCTTAACATTCCTTTGTTACTCCTGAAAATAC 18718 29 100.0 32 ............................. GAACAAGCGCCACAGACAACTGGTATATGAAA 18657 29 100.0 32 ............................. GTAATATCCATTTTTTTACGGGTGTCGTTGCC 18596 29 100.0 32 ............................. TCCGATCACCGCCCAGATAACGGCGGAGATCG 18535 29 100.0 32 ............................. CCGCTCAAAGTGCCACGGCTTGTAATACTTCC 18474 29 100.0 32 ............................. GCAGTGGCATCTATCGGCGTATCACGCCGGAC 18413 29 100.0 32 ............................. AACTGGCTGCCCACAGGCGCACTTGTTTTTTT 18352 29 93.1 0 ...........................AA | ========== ====== ====== ====== ============================= ================================ ================== 108 29 99.8 32 ATGTTCCCCGCAGATGCGGGGATGAACCG # Left flank : CAAATTCTCGCCGCCGGAGAAGTAACCGTGCCGGGGAAACACATCGAAGCTGTTGATATGGCCATCCCCAACAAGGAAGGAATCGGTGATGCTGGTCATCGTGGTTGAAAACGCCCCGGACCGTCTGCGTGGACGATTGGCTTTATGGCTGCTGGAAGTGCGTGCCGGTGTCTATGTCGGCAAGCCGCCTCGGCGAGTACGGGATATGATTGTCGATAACGTCCATCAGGGCATCGAATCCGGGAATGCGGTTATAGCCTGGAGCACGAATACTGAAGCCGGTTTTGATTTTATCACTCTCGGTGAAAACCGCCGTATTCCAAAGGAGATGGATGGCATCAAGCTGGTGTCCTTTCTTCCGGAGGTTGAATGCCTCCCTACCGATACAAGCAAAAATGGTGGATGATTCGTGTTTCTAAAGAGATGTAGATAGCCCTTCTTTTTCTGGTAGAAAAAACAGTTCATTGAAAACTGAATAAATACGAATAGATATAAATAGT # Right flank : CAAGTAGTGACATCGCTCGTCATTCCCTTCGTCCATGCTAAACTTGTAATAAACCATCTTACATTCCAAACCATATAAAGGAGTTGTCTATGACCCAAGAAAAGCATGATCGCATGGAAGATCTTTCGAAATGCATTCCGGTTCCGGATGACACCCAGGCGTTTATGTGTGCCCGCTGTGGCGCGGTATCATTGGATGTGGATCGTTTGTGTCAACCTTTGGGCAAAGGGTGCCGGCGTGATTGGTGTGGCACGCCGAGTTTGAAACCGCCGGAAAGCTGTCAGAATTTCCCTAATAATCTTCGTTATATCTGTGGTAAGTGCCGCAAGGTGGCTGTGAATCCGGAATTGTTGTGTGATCCGCAGCCCTATCCCGAACCGGAACAGAAGGAGGGAGCATCGTAAGGCACCTTCCGTTTTAGAAACGATGCGCCGTTGAGTTTCTTGTCAACGGCGTTTTTCTTTGGGGTGAGTCAGCCGTAGATAGGCATTTGGTAAGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCAGATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCAGATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //