Array 1 33594-32751 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTJ010000006.1 Lactobacillus delbrueckii subsp. lactis strain NCIMB 701437 NCIMB701437-i1-1_scf6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 33593 33 100.0 34 ................................. AGTCTCAACGTTGGAATACTTAAAAGGTTGCACG 33526 33 100.0 33 ................................. ACCAGATTCATAGATCTTAGCGAACACGTTACC 33460 33 100.0 33 ................................. CTTGTAGATGATAAACGGGCGATACTCATCAAA 33394 33 100.0 34 ................................. AAACAATGAGCTCTGGACAGACCTACAGGTCATC 33327 33 100.0 36 ................................. CACTTATTTGGACGACAAGCTGGGCTTTACGACCAA 33258 33 100.0 35 ................................. ACTGATTCTGCAGGCGATGGCAATGATGCACTGGA 33190 33 100.0 36 ................................. CGTGTCGCCATAGCCAAAGAGGCCAGCCGTATCGTA 33121 33 100.0 35 ................................. ACGCTTACTCTATATACAAAAGTAGGCCAAGCTGA 33053 33 100.0 33 ................................. CAGCAATGGGAAATCGGTACCGCTATGCTCACC 32987 33 100.0 36 ................................. AGGAAGAACTCTATGAAGCTCGTAAAGCTGCAATTC 32918 33 100.0 35 ................................. GCCTCAGAAGAGGACATGAACGAGCATGGGGCCAT 32850 33 100.0 34 ................................. ATTTGCTGGTACAAAAGTAACAGAGTTACAACAA 32783 33 84.8 0 ..........A...AA....T......C..... | ========== ====== ====== ====== ================================= ==================================== ================== 13 33 98.8 35 GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Left flank : CGGATACCCTCCGTTTTTATGGAAGTAAGTGATTGTAGATGATGATGGTAATTGTCAGTTATGACGTGAATACTGAAACTGCTTCGGGAAAGAAGAGACTAAGAAATGTTTCCAAAATATGTAACGACTATGGCCAAAGAGTTCAAAATTCAGTATTTGAGTGTCTTGTAGATTCTACAAAGCTTGAGGAAATGAAGGAACGCTTACTAAAGGTATATGATGAAGAGTGCGACAGCTTGTACTTCTTCAATGTAGGCAAAAAATATGAGAACAAAGTTCAGTCTTATGGGTGTAAACAAGTATTAGACTTGGGAAAGCCAGTTGTCTTCTAATTATCTAGACAGTGCGAGTGTGAAGCTAACAGAATTAGGCAGAGGATTCGCACTGTTTTTGACTATTTTTTTGTAGTCTTGAATATAAAATTGCAGTTTTTTAATGCTTTTTATATTTTGTATGCCCAATATTTAGCTGTGAAAATGCTTTTTTAACTAAATGTTGCG # Right flank : ATCGCTTAGATATGTGGATGCTTGATGGTCAAATTCCACTAAAAGCACTCCCTAGCGGGGTGCTTTTTAATATTTTGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGTCAAGCTCAGCATCCCCAAAACAAAAACTTAGTTGAGGAGAATAAACATATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCTATCGACCTGGGCCAAATCGCCCTCCACGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATAGCCCGGCAAATTGCTTTAAACGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGCTCCAGCCTCAAGGCTGCCCGCCTGGCTGAAGCCCAA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.60,-9.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //