Array 1 2264334-2262711 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025428.1 Lacticaseibacillus rhamnosus strain LR-B1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2264333 36 100.0 30 .................................... AAGAAACGATCCCGAGTTTCTGGATTGCTT 2264267 36 100.0 30 .................................... TCATCAGTATTCATGGAAATATAGGATGCT 2264201 36 100.0 30 .................................... ATCATCGAATCTTTGGGGACCTTACCACTT 2264135 36 100.0 30 .................................... GATTGTTTCGGTTGCTTCTGTGATGCCACC 2264069 36 100.0 30 .................................... ATGACTGGTTGCCGGTAAGCGATGAGTTCA 2264003 36 100.0 30 .................................... CATACTTGTATGAGCACTTTGACTTGTCAA 2263937 36 97.2 30 ....................T............... ACCGTTTGTGTTGCATGAATATGATCACTA 2263871 36 100.0 30 .................................... AGGTGCTATGCCGCTTGGCATGACGATTGA 2263805 36 100.0 30 .................................... AATAATATTGTGCCAAAAGGTAGTATTCTA 2263739 36 100.0 30 .................................... TCCAAGGGCATTCCAGATTGCAGAAGCCCC 2263673 36 100.0 30 .................................... GGGTGATGCTGACAAGATCAAGACGGCTGT 2263607 36 100.0 30 .................................... CGCCTTACGGGCGACAGCTAGGCCTATGGG 2263541 36 100.0 30 .................................... AGATCGAGCATTACGGCTTGCAAGACTGCG 2263475 36 100.0 30 .................................... ACAGTTGAGAAAAGAAAATACGCATTTAAA 2263409 36 100.0 30 .................................... AAAAACACAAATGGCCGCTGCCACCTTATG 2263343 36 100.0 30 .................................... AAAAAAGCCGCGGAACTTCTCGGGCTAGAC 2263277 36 100.0 30 .................................... CACAGTGCCATTCCACAAACCCGACAGAAA 2263211 36 100.0 30 .................................... CGAGCTTGCGGCCAATATCAAGCTATATGC 2263145 36 100.0 30 .................................... GTGTGATCATCATTACCTCTCTGCCACTAA 2263079 36 100.0 30 .................................... ATCGCATACTTCATGATGATTGATGCCAGT 2263013 36 100.0 30 .................................... CTGTGTTCTCACGTGTCAACAATTATTTCA 2262947 36 100.0 30 .................................... TTGTGGTGCCAAAACGGGTTGTTGTCGAGA 2262881 36 97.2 30 ...................................G TTTCAGCAAATATGACGTCTAACATGCCTC 2262815 36 94.4 30 ..................................AT ACTTGGAAAAGTTGCTATGCAGTTTGAATA 2262749 36 83.3 0 .......................AA.A....G..AA | T,CA [2262714,2262720] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : CCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTATCAACAGGCGTTCAAATCCATTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAAGTTCAAACGGCATAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGTCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCTAAATTGGTACATTTGTATCGTAAAGTCGGCTTTCAGCAGCTGCCAGATCGGGAAACAACGATTAATGAGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //