Array 1 364224-360169 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKQN01000002.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 364223 28 100.0 32 ............................ GGCCGGCGTTGCGATGTCGTTGACCAGCAGAT 364163 28 100.0 32 ............................ GATCTATCCGCTACCGGATACACCGAGGGAGA 364103 28 100.0 32 ............................ ACGCCGCAGTTCTGGCTGAACCTGCAGCACAA 364043 28 100.0 32 ............................ AGTCCGGCCAGTCGAAGTTGGGCTGCCCGCGT 363983 28 100.0 32 ............................ GGCCGATGCGCATCGCCGTCCGCGAGGTAATA 363923 28 100.0 32 ............................ ATTGCCGCGCATGTGATCCATGAAGCTCTCCT 363863 28 100.0 32 ............................ GACGAAGCACACGCGCCACTGGTCGTTGATGC 363803 28 100.0 32 ............................ TTGTCCCAGCGCAGGTTCTCCCACTTCAGCAC 363743 28 100.0 32 ............................ TTATCCCTCCAACAGCCGCGCGAGGGGCCGCG 363683 28 100.0 32 ............................ ATTGACCGGAGGCCCCCATGAAGAAGCTGCCC 363623 28 100.0 33 ............................ TTCCAGCGAAATCAATCAATTCCGCCGGCACGC 363562 28 100.0 32 ............................ TCTTCCGGATTGTCCGGATCAACCCCCAGGGC 363502 28 100.0 32 ............................ ACGCCCCGGCTTCGGCCGGGGCATCACCCGAC 363442 28 100.0 32 ............................ GCGCTGAGCAACCCGACGCAGATCAACGGCAA 363382 28 100.0 33 ............................ TCAAGGCGCGCCGCTCGCATAGGGCGCGCAATT 363321 28 100.0 32 ............................ TTTCGCAGGGCGCGGGCCTCTCCACGACAGGA 363261 28 100.0 33 ............................ AGTTGGCAGACCCGCCTGGGAGCGCTGTCGTCC 363200 28 100.0 32 ............................ AGCGGATCGCGTTCCCGGTGCCGTGGTTCACC 363140 28 100.0 32 ............................ AACTCGCCGCCGCGCTGCGCGAACTGCATAGC 363080 28 100.0 32 ............................ TTTCGGGGCGCTTCGACAACCGTCGAGGAGGC 363020 28 100.0 32 ............................ GCCCATCTCGGTTGTGCCACCAGGCTCGCAAG 362960 28 100.0 32 ............................ TCAGCGTGGGAACGGATCGCCGCGAGAACGTC 362900 28 100.0 32 ............................ TGATCGGCCAGGACGTGGACGAGGTCGCCGAG 362840 28 100.0 32 ............................ AGTTCCACGATCTGATCGTCGCTGAGCTCGCT 362780 28 100.0 32 ............................ TTCCCGCGCGGCGATCTCGACAGCGATTGCTT 362720 28 96.4 32 ............C............... ATAGGGCAGAGGGTTGTTCTCGCCGAAACGAA 362660 28 100.0 32 ............................ TTGACCCGGACTTTGCCCACTGCGGCGACATC 362600 28 100.0 33 ............................ AAGGGAGACCGCAATGAGCAATGCAGTAGTCGC 362539 28 100.0 32 ............................ GTCTTGGCCCAGGCGCGCCGCTTAAGAGATAT 362479 28 100.0 32 ............................ ACGCAACGCGGCCGAATGCCCTTGCCTTGACG 362419 28 100.0 32 ............................ GCCATGAGGGCAAAGAAATGAAGCTCAACGAA 362359 28 100.0 32 ............................ ACGCGCCGCGCTCACTGCTTCGCGCAGCACGT 362299 28 100.0 32 ............................ ATAGCGCGCCCTCATCTCCCGGTGACGGACGA 362239 28 100.0 32 ............................ ATCTCCGATGTGGCGAGACATGTGCTCTTGGC 362179 28 100.0 32 ............................ AGCCTCGACCAAACGCGGAGAAGGTGGTCAGG 362119 28 100.0 33 ............................ TCAATGGGATGGACGGGTGCAGCACGATGTCCA 362058 28 100.0 32 ............................ TCAGGCCCTCTTCTGGATTGTCCGGATCAACC 361998 28 100.0 32 ............................ TTTCCGAGCTGGCCGAGATCGATCTCCATCTC 361938 28 100.0 32 ............................ TTTCCGAGCTGGCCGAGATCGATCTCCATCTC 361878 28 100.0 32 ............................ ACCAGGGGGCCGTATCGCTCATCCCTGCACCG 361818 28 100.0 32 ............................ TGTCTCCTTGTCACCTGTCGATCCCGCGGTCC 361758 28 100.0 32 ............................ AGCGGAAAGTGCATCGCGCCCGCCGGGCCCTC 361698 28 100.0 32 ............................ ATGACCGCGTAGCGCTGTCAAGACCCGGGGCG 361638 28 100.0 32 ............................ TTCGTCGCCTTGCCACCGTTGCTGGCAAAGGT 361578 28 100.0 32 ............................ GGCAGGGGAGGGGACGCCCTCGGCGGAGGCCT 361518 28 100.0 32 ............................ TTCAAGCGCAACATGCTCGCGCGCACCTTCCG 361458 28 100.0 32 ............................ ACCACCCCGGAGGAGGAAGCCGCATGATCCGC 361398 28 100.0 32 ............................ GAGCCGCGCACGCGCTCGACGGTGATGCCCTC 361338 28 100.0 32 ............................ AGCCGCGTGACGACTGCGAGGACTGCGGCGAG 361278 28 100.0 32 ............................ TCGTAGGCCATCGCACGCAGCGCGGTGTACGT 361218 28 100.0 32 ............................ CGCAGGCTGAGACGCATCAGGCGCATCAGAGG 361158 28 100.0 32 ............................ ACATAGCTCAGGCCCTCCCCGCTTCCGAAACT 361098 28 100.0 32 ............................ GTCGGCGGAACGCAAGCGCGACCTGCGCTGGC 361038 28 100.0 33 ............................ CTGATGCACGCTCTAACGGATGGTGCATACGCT 360977 28 100.0 32 ............................ AGCCGTCCCGGCGAGGCGAAACAGGGAGACAA 360917 28 100.0 32 ............................ TACGAGTACTCCAAGGACGGGAAAACGATGCG 360857 28 100.0 33 ............................ ACCAAGCACGCTTTACGCCATTCATGTTCATGA 360796 28 100.0 32 ............................ TCGGGCCGCCACGTCTGGAATTTCCAAGCTTG 360736 28 100.0 32 ............................ GCTGTTCCCGTGCACGCGCATGCAGTAATCAT 360676 27 96.4 32 ........-................... AGCGCGCGACGCTGGAAACGCCGCGAACGCAT 360617 28 100.0 32 ............................ AATCCGGCGGGTTGGTGATCGGCATGGTGACG 360557 28 100.0 32 ............................ AGGAAGCGCTGCAGAAGCTGCTGGGCATCGTG 360497 28 100.0 32 ............................ GCGGGCGGCATTCGCAAGCGGGGCCGGAAAGC 360437 28 96.4 32 .......................G.... AAAGTCGCCGCACCAGTCCGCAAAGTCGGAAT 360377 28 100.0 32 ............................ GCCCCGCTGCGTTTCGCGGACGGCCGAAGCCT 360317 28 100.0 32 ............................ TCGACGCCTATGCCGAGTGCGCGCGGCTCGGC 360257 28 100.0 33 ............................ CTGGAGCGGGTCAAGTCACTGCCGTGCTCGGTC 360196 28 92.9 0 .......A...................A | ========== ====== ====== ====== ============================ ================================= ================== 68 28 99.7 32 GTTCGCTGCCGCGTAGGCAGCTCAGAAG # Left flank : CACGCTGGCGGGACTGATGGCGGAGGACTGGCTCAAAGGCGTGCGCGACCACGTTCGTGCGACTGGCGTGCTGCCTGTGCCGGAAGGGTCGCCACACCGGACCGTGCAGCGTCGCCAGTTCAAGACCAGCGTCGAGCGGCTGCGCCGTCGACGCATGCAGCGCAAGGGCGAAACCGCGGAGCAGGCCGCGGAGGCCATCCCGGCCACGGCCGAAGACCGGCCCGACCTGCCGTACGTGCACCTGCGCAGCCGCAGCACCGGCCAGCCGTTTTGCCTGTTCGTGGCTCTCGGCCCGCTGCGGAAGGAGGCCGCGCCCGGCACGTTCAATAGCTACGGCCTGAGCGGCACCGCCACGGTCCCTTGGTTCTGACCCTTTTCTGCGGCACTCCGACAGGCTCTTTGACAATCAACGGCTTGCGCATGCCCTCCGCCGAAAGGGGGGCAGGCCCCACGTCGTAGGAAGCGGCACGCTTTCAACGACTTGGCGGAATATTCGTCTA # Right flank : TAGGCCGCAGTCCCTGCCGGCGCCGGGGCGCTGTTTGCGGCGCTGCGCCGGTAAGGATGGAGCGTCACAAATGCTTGAGCGTCTCCTTCACGGCCGCCGCGCAGCGGCGGCTGACTTCGAGCGGTTGCTTGCCGTGGCGCAGCACGGCCTGGACGTGGCCTTCGGGGCTGCGGCGCAGTTCGACGATCTCGTGGCGGGCGACCAGGCAGTTGCGGTGGATGCGCACGAAGCGTTCGCCGAACTCGTCCTCCAGCGACTTCAGCGATTCCTCGATCAGGTCCTCGCCGCGGGCGTGGTGGACGACGACGTATTTCTCCTCGGCGTGCAGGTAGTGCACGTCCTCGATCGGGATCAGGCGCAGGCTGCCGCGCAGGCGCGCGCACAGGTGGCTGCGGCGGCGCGCGTTGCCGGATTCGGCGGCGCGCTCGCGGCCGGCGGCGAAGGTGCGCACGCGCTCCAGCGCCGCGGCCAGGCGTTCCGGGCGCACCGGCTTGACCAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTCAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //