Array 1 22823-23783 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VUKJ01000017.1 Staphylococcus sp. GDX7P459A GDX7P459A-1_(paired)_contig_17, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     22823	    36	 100.0	    31	....................................	CCTGTATCTTTAAAATCGTTTATCGATTGCC	
     22890	    36	 100.0	    30	....................................	ACGTAGAAAGTGGGAAGTGTCAGAAACCGA 	
     22956	    36	 100.0	    30	....................................	ATGAACAAGAGTTGAACGGTGATGAACGTA 	
     23022	    36	 100.0	    30	....................................	ATAGTTTCTTCATCTTCTTCATCGTCACCG 	
     23088	    36	 100.0	    31	....................................	GTTGCACATGCTGATGTAAAGTCTTCAGTTT	
     23155	    36	 100.0	    30	....................................	CCATGCCTGATATAACCGAACTTACGATAC 	
     23221	    36	 100.0	    30	....................................	GTGTCGGGTGATTAACATTATCTTTTTCTA 	
     23287	    36	 100.0	    30	....................................	TTCACGCGTTACACCTAAAAGCATTACCTA 	
     23353	    36	 100.0	    30	....................................	AAAGTGGTTATCCTGAATGGATTATCCCTA 	
     23419	    36	 100.0	    30	....................................	ATTGAAAAAGAAGTCGATGCATCAGAAATG 	
     23485	    36	 100.0	    30	....................................	TACTAAACGTATTGCAGAAGCTATTCACGG 	
     23551	    36	 100.0	    30	....................................	CGACCACTTAATAATAAATAGTAGAGTTGG 	
     23617	    36	  97.2	    30	.........................T..........	TAGTATCGGAAGGTTTGTAACCACTATTAG 	
     23683	    36	 100.0	    29	....................................	CAACTTTGTTTGATCAATCATAGTTTATC  	
     23748	    36	  77.8	     0	.................C........C..A.ATTTA	|                              	
==========	======	======	======	====================================	===============================	==================
        15	    36	  98.3	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC	                               	       

# Left flank :   CGATACAAACATAATTGTATTAACAGGATCATTACATTTCCTATCTGAAGAGTGGAAATACAATAACTATATTAGAGATGGGAAACAAAAAAACACATCTGAATTTCTAGAAGAATTAGAGTGGAACGCGCCACTTGATTTTGATAAGAAGGATTTAGAAGAAAGTTTGAACCGATTCATTTTAACTTATCAAGATAAATTAGAATTATATCCCATAATATCAAACTATCAAATAGCACAAATTATGTTATTTAATGCCATAGATATATATGTTGGGATTTCATATATGCAACATTGTAATCATAAATTTAAATTAAAAATCAAAAGTGAATTGCTGCCTAAAAGCATCAATAAATATTTAAATCAACAATTGCTGAATTAATTACTTTACTATAATTAACTTAATAAATTATTATTATCTTAGTGAATGAGTTTAGCTAACTTGTTCACTAAGATACCTTTTTTTGAACTAATTCTTTTAGCGATTAATATTGCTAGAG
# Right flank :  AAATTAATGATTACTAAGTGCTGTTACTTGCTACTTTTATTATCATGATCAATCAATTGATCAAAAGTATAGAAATATTTAAATTTAATAAAAATATTAGTTGACTAAGCATCCATGATAGCAATATAATTAATTTATAGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGACTTTATGTCGTGTTTATCCCATTAATTTATTAATGGGATTTTTTCTTTTTAATTAGACAAATCGCCAACGATGATGACTATCGTTGGCGATTATTTTTGTTTAATGTCACTTAATTACACATTATCATCAGTAATTTGACCAATCCAATAACTCGCTGCAAATCCAATGATTAAAGTGATGATTGAAAGTGTCCACTCAATACCAGTTTGAGGAAGACCAGGGAATACAGCATATATGGAGCCAATAACGAATCCAGTTATTAATGCGAATGTGGTATAGAAGTGATGATGTAGGAAGTATTT

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.60,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//