Array 1 68900-69056 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTFY01000018.1 Eggerthella guodeyinii strain HF-4214 Scaffold13_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 68900 25 100.0 41 ......................... ACGCCGACGGTCAAGCTGGCTGCACCGGATATGTCGACGCT 68966 25 100.0 41 ......................... GTGCGGCGAATCAGGGCGCTTGCCCCGGTTATGCGGATACC 69032 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ========================================= ================== 3 25 100.0 42 GACAACGACGGCGTCTGCGACAACT # Left flank : CCTCATCGACGGCGGCGGCGTCAAGGTGAACGGCGAGGTGCTTCCGGCGAAGTCCTACAACGTTGATCCATCGATGCTGGCTGGGGCCACCTTGCAGGTGGGCAAGCGCAAGTTCGTGAAGCTGGTCTAATCGGCAACGCACCGTATCATGCATACAGCAGGCGATCTTCGGGTCGCCTGCTGTGCGTCTCGGAAAATTTTCAAAAAGCTTGCAAGGATTCCCGCCCCTCGTTCGTTTTGTAGATGAAGGACGAAAACGAACGACATCAGGAGGACTGAACGAAATGAAGAAGAACGTGATCGCAATCGTGGCCGCCGTGGCGCTGGTGATTTTGGCCGTGCCCACCATCGCATTCGCCAACGGCATGCAGCAAACGTGGTGCCCCGCCGACGGCTCCGGCTCGCTTGCGCACCATGCGATGCGCGCCGCGGGCGACAGCGACGCCGCCGCAACCGTCGGCGCAGCCATCGCCACCGTGCGCGGCGAGTACGTCGATCGC # Right flank : TACGGTACGGGAGCGCATCACGGCTGCGGCGCCGGCAACGGTACCGGCAACGGCGGCGGTTCCGGCTATGGCGCCGGAAACGGCGGCGGTCACCACGGCTGCATGCGTCGCTAGCGTCAGCATTCGACGAACGTGCGATCGGCAGGAGACATCGAGGGGGCGATGGAGCGGCACGGCGACGCCGTGTGGCGCGTGTGCGTGCTGTACTTCCGCGCCCATACCGACGCCCAGGATGCCTTCCAAGACGCGTTCCTGAAGTACGCGCTTGCCGACCGCGTAGCGTTCAACGACGATGAGCACCGCAAGGCGTGGCTCATTCGCGTGGCTGCCAATATATGCAAGGACATGCTCAAGGCCGCAGGTCGTCGCGTGGTGCCGCTCGATGCGGTGGCCGAAGCGGCCTGCGCGCCCTCGAGCGATCCGGCAACGCAGCCAGCGTCGTTCTCCAGCGAGGTGGTGGACGCCATGCGCTCCCTCGACGATCCGCCCCGTACGCCCCT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACAACGACGGCGTCTGCGACAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [25.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 1 33721-31563 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTFY01000013.1 Eggerthella guodeyinii strain HF-4214 Scaffold9_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================================================= ================== 33720 33 93.9 33 ...............A......C.......... GAACCCGGCTTTGTAAGGTTTCCCACCGTGTCG 33654 33 93.9 35 ...............A......C.......... TCCGTCCACCTCCTCGATCACGGCGTCGCAATAGT 33586 33 93.9 35 ...............A......C.......... AAGATGGACGTAACCCAGTCTTTCAAGTGCCATTC 33518 33 93.9 36 ...............A......C.......... AGTAATACCAGGCTAACACCGATACGCATTACTGAC 33449 33 93.9 36 ...............A......C.......... GTGCTCGGCGGAGGTCGAGCGGGCCTGCGTCGTGCG 33380 33 97.0 34 ......................C.......... TTGTTCGTCAGCGTCAGGCGCGATGCTGGCATGT 33313 33 97.0 33 ......................C.......... ATGCTGTACGTGGAGTGGGACCGCGACCCGTCG 33247 33 97.0 33 ......................C.......... GATGCCGTGCAGGCCAACGGGCGCGCCCGCGAG 33181 33 97.0 35 ......................C.......... TCAGCCGTCAGGTCAGTGATCAAAATATCGAGCTG 33113 33 100.0 32 ................................. CCGATGGGCCGCTTGGCGCACTTCGTCGCGCT 33048 33 100.0 33 ................................. GAGATCGCGATGGTCTTCGCCGAGACGCGCCCG 32982 33 100.0 33 ................................. TCGTCCAGCCAATAAGGCCAGTAACAGCATTCG 32916 33 100.0 33 ................................. CGAATCGTCGACGTGCAGGGCGGCTCCGCAATA 32850 33 100.0 35 ................................. AATTGTGTTGTGCTCATGCCGTCGGGATAAAGTTC 32782 33 100.0 34 ................................. AATGACTACTTATTCATGCGACCTCATTATCTCC 32715 33 100.0 36 ................................. CGGCTCCGGCTGTGCGATCAGCTCGTCGCGCAGCGT 32646 33 100.0 37 ................................. TTGCGTATCACCAGCGCCTTGATCGCGTCGAGCTGGC 32576 33 100.0 34 ................................. CGACTTGTTTTGGCACGCACGGGGAATACACAAT 32509 33 100.0 34 ................................. GGAGCACCTTCCGTCTTTGTCGAACGCGCCCTGC 32442 33 97.0 34 .......................C......... GTACCCGTTCATTCCGCGCAGCCGCTCTACCGCC 32375 33 100.0 35 ................................. ATGATGTGCATGCCGCTGTGGGACTTGTAGACGTC 32307 33 100.0 34 ................................. GTACCGGCTTCTTTATCGTTCCATCGCGAGTATC 32240 33 97.0 32 ......................C.......... CGAAATAAAAAGTCGTTTGGTGCCGGTTTTTA 32175 33 97.0 35 ......................C.......... CTGGACGTCGACGCGCAGAAGGACGCCGCCGGCAC 32107 33 97.0 73 ......................C.......... GGCCACTTGTTAGACGGGGAGTAGGCTCCGGGTTGAAATCGCAATTAAGCACAAAGCAATCGCCGCCGACAAA 32001 33 90.9 37 .......T....G.........C.......... GATAGCCGCCATCGTGTACACGATAGTGTTCTTGATG 31931 33 97.0 33 ......................C.......... TGCAATTGCAGGGTGTCGCTGTCCCGGTCGTAG 31865 33 97.0 34 ......................C.......... CTGAGAAGATGCGCCAAGCGGCCACCGGTGCGAC 31798 33 97.0 36 ......................C.......... ACGTGAACGTCGGAGGCTACCAGATGCCCTCCGTGA 31729 33 93.9 34 ....................C.C.......... TAGTTCGCATTGCCATTGCTGTTGCAATAGCACA 31662 33 87.9 34 ...T....T.......T.....C.......... GGTCGGTTTGTCGAATGCGACGCGCCTGAACACG 31595 33 93.9 0 .........T............C.......... | ========== ====== ====== ====== ================================= ========================================================================= ================== 32 33 97.0 36 GTCACTCCCCGCAAGGGGAGTGTGGGTTGAAAT # Left flank : CGTGCGGGGCGACTTGGACGGCTACCCTCCGTTTTTGTGGAAGTGAGGTGTTCGGAATGCTGACGGTGATCACCTACGACGTGAATATCGAAGATCCGGCGGGTCAGCGCCGCTTGAGGAAGGTAGCGCGGCAGTGCGTCAACTACGGCCAGCGTGTGCAGAACTCGGTGTTCGAATGCGTCGCCGATGCAGCGACGATGGTGCGCATCAAAAGCGAGCTCGTCGAGCTGATCGATCCTGAGAAGGATAGCTTGCGATTCTATCATCTGGGAAATGCGTACCAGGGAAAGATCGAACACGTCGGCGCGAAGCCGACGTACGAAGCCGAGGGGTTCCTGGCATTGTAGCGACGGTGCGAACATGAGGCTCTCATGGGCTACGTGGGAGGTTCGCACCGATTTTTGTGGCATTTGGAATGCTTGGCGCGCTTATCGTGTGTTTGTGCATGCTAGTTGGTACTGCATGTTGATCGATACAGCAAGTTTATGCAAAATATTGCG # Right flank : TCATTTCGAGCTCGACGGGCTGCTAGGGCGATGGCCGTGTCCTCGTGAGCAAGCCTTGAGTTGACGCGGATGGTGCGTCGCTTGCAAAAAAGCGCGGATTGATTCGTCGACGCCGCACGCGGCCTCTTGCCGCTTCCAGGGGTCTGGATGCCTGCGTCTTCGTCGATTGGAGATGCAGGCATCCAGTTGAAAGGGCGTTATTCCACCACCAAATCCGCGAACTCGAACTTGGTGCAGTCCACCAGCCCTCGGTTCGTCAGCCTCAACTCGGGGAGGCAGGCAAGCGGTATCAGCGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCACGTCTTCTCCAGACGGTGCACCTTCTCGCTCATCGTCACGGCGTCGAGCGCGTCCATGAGGCCGGCGATGGGCAGCTCCACGAGCCCCAGCACCTCGCCGTCGGCGACCACCGCCATGCCGCCGCCGCATGCGGCCAGCGTGTTCGCGGCCAGGGCCAT # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.07, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCAAGGGGAGTGTGGGTTGAAAT # Alternate repeat : GTCACTCCCCGCAAGGGGAGTGCGGGTTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.30,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //