Array 1 25294-28928 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZJU01000001.1 Salinicola peritrichatus strain JCM 18795 Salinicola-peritrichatus_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 25294 32 100.0 34 ................................ AGAGCGCCGGTATCAACTATCAGCACTCGATCGT 25360 32 100.0 35 ................................ CACAGGTTGGTACGCTCGGCTACGACGTCACCTGG 25427 32 100.0 35 ................................ GGCGACGTCGACGGAAAACCGGTGCCAAAACACAC 25494 32 100.0 34 ................................ GGATCGGACCATCCCTCTTTGCCCAAGGCGAAAG 25560 32 100.0 34 ................................ CGCTACTCCGGCTCGTCGCTCAAGAGCCGCCACA 25626 32 100.0 36 ................................ ACGATGTGATCGACCTCCGTCGCCGGCATCACTCTC 25694 32 100.0 36 ................................ ACCTGTCTTTGATGTATCCGTTTGGATGAAGCAACC 25762 32 100.0 35 ................................ AGCCCTTGCCGGCTGGAAGATCGAGGCTCAGTGCA 25829 32 100.0 34 ................................ TTTTGCCAACTGCGCTCTAGGGTACCGAACCACG 25895 32 100.0 36 ................................ TGAAAGCTTGGGCCCGTGAGCATTGCCGGCCTCATT 25963 32 100.0 33 ................................ ACGCTCAACGGGCAACCGATGCCGTCGCCAAGG 26028 32 100.0 35 ................................ ATGTATGGCTGGGATGGCGGCACCGCGGTGCTGGC 26095 32 100.0 35 ................................ ACCGCTGCGCGTAGCGCCTCCGGGTGCAGATGGGC 26162 32 100.0 36 ................................ AGGTCGATGCTGCCTAGATCAATTGCCATGTTTAAA 26230 32 100.0 36 ................................ TTCCGTGCCTTCGACTGGGTCGGCTTCGGTGTGAGT 26298 32 100.0 35 ................................ TCCATGTCGGATAGCTTAAGCTCTGCGGCGTAGGC 26365 32 100.0 35 ................................ GTGGTCTTCGATGTAGAGTTCGCTGTTGTACTGGT 26432 32 100.0 36 ................................ ACGATCTCCGGCCCACGCTCACCGACGATGCCGAAC 26500 32 100.0 34 ................................ CATTCCTCCATCATGCGCTGCTCGCGCTCCAAGT 26566 32 100.0 34 ................................ GTGGTCTTCGATGTAGAGTTCGCTGTTGTACTGG 26632 32 100.0 36 ................................ TAATGCTTTCCACTGGTGAGGGGTAACCCAGTAAAC 26700 32 100.0 34 ................................ CTGTGCAGTACGAAGGGCTGATGGATCGTGACAA 26766 32 100.0 34 ................................ CTGTGCGCGTGGTGATCATCGAGGGCTTGCCGGA 26832 32 100.0 36 ................................ TGTTTCTGTCGGCTCTGATGCTGGCGTATAGCTCTC 26900 32 100.0 36 ................................ ATGACTCCACCTTTCGATAGCCAGCGTCAAACAGAC 26968 32 100.0 38 ................................ TGGCGCCAAACTGTCAAAGTTAGGTACTCAGGTAAAGC 27038 32 100.0 36 ................................ AAGCTGTCAGGAAGTTCTTTCTTCAACACGCTTGAC 27106 32 100.0 34 ................................ TATGTACTAGCCCGACGAGTTGATAACGCTATCG 27172 32 100.0 34 ................................ TTGAGCCGCACGTGATTACGCGTGATGAGTATTT 27238 32 100.0 33 ................................ CCTATCTACCTGAGAAATGTATCGAGAAACCTC 27303 32 100.0 34 ................................ GCAACCTATCCGCCGTGTCGGTGGGTGGGGTGCC 27369 32 100.0 35 ................................ CTCTGCACGTTCGTGTTCTGCGCTAGCGCCTGATA 27436 32 100.0 34 ................................ AATGCCAAGGGCGGCGAAACCACTTACGAAGCAC 27502 32 100.0 35 ................................ ATTGCAGGGCATCCTATCTGGAGTTGGCAGCTTAA 27569 32 100.0 34 ................................ CAGCGACAACTGGATGCGGCGGCGAAAGTCGGTG 27635 32 100.0 34 ................................ ATTTACGAAAAGCCCGGCCATGAGCCCGAAGAGC 27701 32 100.0 34 ................................ AATTCCTGCTGTGTCCATTAATAATGGATACCAG 27767 32 100.0 35 ................................ TGCTGCTGTAGGTTTCTCAGCTGCATTCACGGTTC 27834 32 100.0 35 ................................ ACGCCCATTACCGAGATACCCCGGTAACTAGCAAT 27901 32 100.0 33 ................................ ACGCCTCGGCTTATGTCGGGGCGTTCTCGTTTT 27966 32 100.0 34 ................................ CGTAGAGTTAGGACGAAGGTATGGTGTCCATTAC 28032 32 100.0 34 ................................ GTTTATTACGGCGTGGTACTGAGCATACCGGCGT 28098 32 100.0 35 ................................ GTTGAGTGGCACCGTAACGTGGCGCTCCACAGCTC 28165 32 100.0 33 ................................ TCAAGCCGAGTTGCAGCCCAGCGAAGTGACCGC 28230 32 100.0 35 ................................ GCGATCTCCCTCGGCGAACAGCTCCGGATGGGACC 28297 32 100.0 34 ................................ TGCCCTGGCGCTCTCGCCGCTCGCTGGCTTCCGG 28363 32 100.0 35 ................................ AACTGCCCGCTCCAAACGCCTGCTAGCGGCAACGT 28430 32 100.0 37 ................................ AAAATCCACCCTCCTCCGCCTGCTAAACGATGGCGTC 28499 32 100.0 34 ................................ TGCCGAATGCCGACGACAATCAAGTCCTCCAGTG 28565 32 100.0 36 ................................ TGATGCGTTGCCGGTTCGACTGGCTGACGACTAACG 28633 32 100.0 35 ................................ CAGCGCGGTGATGCGACCCGTAACCCATGCGTTCT 28700 32 100.0 33 ................................ TTGAGCGACAGGAGCCGCACGAAGAGACGGCAG 28765 32 100.0 35 ................................ AATAGCGTCCTTCTCGGAAGAAGCGCGCTGAAAAG 28832 32 100.0 33 ................................ AGTGTCTGCCCCACGCGGTTCAGATTGCCGGAG 28897 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 55 32 100.0 35 GTCGCGGCCCGCACGGCCGCGCGGATAGAAAC # Left flank : GGTCAGAAGCTGCTTGAATCCGTGCGCCAGATGAAGCGTGGCGAAGCCGCACGGGTAACACGAATCGAAGTTTCCGAAGCGCGGGCGGCACGCCACCGTATGGGGTTGTCGCAAGCCGAGTTTGCCGAGTTGCTGGGCGTTAGCCTGCGCACCCTCCAAGAGTGGGAGCAAGGCCGCCGCACACCTACAGGGCCAGCGCTTCGGCTGTTGCGGGTGGCTGAGAGGCACCCCGAGGTACTGCGCGGCCTGGCATAACTTTCCCAAACTGATCCCGCTAATCATCGTACCCGGCCAGCCATTTAATCCGAATACCCAGATTTTCCCTCTGCGAACCACAAGTGTCCCGCTCTTTCCCGCCAGGTTCGCAGCTCTTTAACAAGTTGATTCAATAGCAATCGAACGCTTTAAGTGGCTAACAGCGCTCCACAAGCTGCGTATCGAGCGGGGTTCGCTGATGCACAGCGATTTTGTTTTATTGCTCAATGAGTTATAAACGAACA # Right flank : ACAAATGGGCCGGAACCGTGCGCCCGGCGAAGATCAGTCGCGGCCCGCANNCGCGGATAGAAACCCAGGCTTTGTAGGCGAAAGCCTCAGTCTGCTGGAGTCGCGGCCCGCACGGCCGCGCGGATAGAAACATCGTCGAGGGCGAGAAGGACGTAGACAACCTTGTCGCGGCCCGCACGGCCGCGCGGATAGAAACTGTTCTGCTACTGGCCTTGCTGGTGGCAGCCATCGCCATGTCGCGGCCCGCACGGCCGCGCGGATAGAAACCTTGGAGATGCCCGAGAAGCTGGCCAGCGCTGAGAGTCGCGGCCCGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGGCCCGCACGGCCGCGCGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 2 29028-29195 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZJU01000001.1 Salinicola peritrichatus strain JCM 18795 Salinicola-peritrichatus_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 29028 32 100.0 33 ................................ ATCGTCGAGGGCGAGAAGGACGTAGACAACCTT 29093 32 100.0 39 ................................ TGTTCTGCTACTGGCCTTGCTGGTGGCAGCCATCGCCAT 29164 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 3 32 100.0 36 GTCGCGGCCCGCACGGCCGCGCGGATAGAAAC # Left flank : AACTGCCGAATGCCGACGACAATCAAGTCCTCCAGTGGTCGCGGCCCGCACGGCCGCGCGGATAGAAACTGATGCGTTGCCGGTTCGACTGGCTGACGACTAACGGTCGCGGCCCGCACGGCCGCGCGGATAGAAACCAGCGCGGTGATGCGACCCGTAACCCATGCGTTCTGTCGCGGCCCGCACGGCCGCGCGGATAGAAACTTGAGCGACAGGAGCCGCACGAAGAGACGGCAGGTCGCGGCCCGCACGGCCGCGCGGATAGAAACAATAGCGTCCTTCTCGGAAGAAGCGCGCTGAAAAGGTCGCGGCCCGCACGGCCGCGCGGATAGAAACAGTGTCTGCCCCACGCGGTTCAGATTGCCGGAGGTCGCGGCCCGCACGGCCGCGCGGATAGAAACACAAATGGGCCGGAACCGTGCGCCCGGCGAAGATCAGTCGCGGCCCGCANNCGCGGATAGAAACCCAGGCTTTGTAGGCGAAAGCCTCAGTCTGCTGGA # Right flank : CTTGGAGATGCCCGAGAAGCTGGCCAGCGCTGAGAGTCGCGGCCCGC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGGCCCGCACGGCCGCGCGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [36.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 50-2354 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZJU01000026.1 Salinicola peritrichatus strain JCM 18795 Salinicola-peritrichatus_contig_26, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 50 32 100.0 36 ................................ GACAACCGGGCATCGTCCATCGAGTCGAACGTCACG 118 32 100.0 35 ................................ CTTACCTAGGTGACGTCCATCGCCATTTGTTTAAG 185 32 100.0 35 ................................ GAGAACGGCATCAACGACAATGCCGAGGCTATCGA 252 32 100.0 36 ................................ CATCCTACCACCAAATAGACATGAATCAATTTGCCG 320 32 100.0 35 ................................ TCCGTCACCCTGCGTCCGCAGTCGATCTATGCCGG 387 32 100.0 35 ................................ GGGAGACGAAGGCCGCGTGGGAGCCAGAGCAAAAC 454 32 100.0 35 ................................ CCCAAGGCTCGGATCAAAGACCTTGACTCTGAAAA 521 32 100.0 36 ................................ TTCAACAAGTGACACGTCACCCCCCGATCGATTCGA 589 32 100.0 33 ................................ CAACCCGATTGATTGGCAACGAAGCTGGGAGAT 654 32 100.0 35 ................................ TGCAATCTGCATGTCGTAGTCTTCGCCCGACTCTT 721 32 100.0 34 ................................ TACCTTCCCAAGTCGAGCGAACAGGTGGTTGAGG 787 32 100.0 36 ................................ TCTGTGCTGACGCTGGGCAAGCCTAACAAGACGCCC 855 32 100.0 34 ................................ TTCCGTCCACCTACCCGCCTACGTAAATACGCTT 921 32 100.0 33 ................................ GCGGCATCATCTGCGCACCAACCGGCATGCCGA 986 32 100.0 35 ................................ ACGCTGGCAGGAAAGGACAAAGACGGCAACGTCTA 1053 32 100.0 37 ................................ TTCATACTACCCCTCTGAGCTAACTATTCCGGCCAAG 1122 32 100.0 35 ................................ GTATTCGCGTGAGCGGATCCAGCCCAAGCAGCGAA 1189 32 100.0 35 ................................ AGTTGCTGGCGTAGGCGCTGCCGTCGACCGGTGAG 1256 32 100.0 33 ................................ GGAGGCCACTGTCTGGATTGATCCAGAGGGCCG 1321 32 100.0 35 ................................ GTCTCCCGAAGCCTGACAAGCGTGGATGGTGGCCT 1388 32 100.0 35 ................................ AACGACACCACGTCATCGATCAACTCGACGTTGAC 1455 32 100.0 33 ................................ GAGAGCCGGATTACGACCGTGGTCAGCGAAGCC 1520 32 100.0 36 ................................ ATACGTTTTTGCAGGATTGAGACACAACCTAGACAG 1588 32 100.0 34 ................................ CGCCGCAACGGCATCGGCCGCGCCGGTGTCATGC 1654 32 100.0 35 ................................ GCCGTCATGGATATCTCGGTGTGTCCGTTCCCAGG 1721 32 100.0 35 ................................ TTGAACTCCTTCGGCCCGGTCTTGCATGTCACCGT 1788 32 100.0 34 ................................ ATGAGCGTCTGGCTCATGATGCTGGTGACGGTTT 1854 32 100.0 34 ................................ ATTGCTCCGCCTCCACTTGGCAGGACCAGCTGCG 1920 32 100.0 35 ................................ TATGCGCTGAGCAAGGCGAAGATCGTCGAAGAGTT 1987 32 100.0 35 ................................ AGACTCAGAGCGCCGTCGGCAGCGCCTCTATCAGC 2054 32 100.0 34 ................................ CAGCCAGACTGGCTGATCCAGACATTGACCTATG 2120 32 100.0 35 ................................ GGCTACTCCCTATCGCCTTCGGCTGCCTGGCCAAC 2187 32 100.0 34 ................................ GCGATATAGCTCATGCTGCCCCCCGGATCTGATG 2253 32 100.0 38 ................................ GTCAACGCCCCGCAGGTTATTCCGACCAACTACTAGTA 2323 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 35 32 100.0 35 GTCGCGGCCCGCACGGCCGCGCGGATAGAAAC # Left flank : CGCGGATAGAAACTATGACGATGCCGTGGGCGAGCCGTTCGACTATCCCG # Right flank : CGCCTCGAGTTCGCTCACGCCCGAGGTCGACTGTCATTTTCAGAAGACGACTGCACCAGGTGGCGGGGCGTAACGCCAGGTGTGAAGGCGGCTGTCATTTTCAGAAGACGACTGCACCAGGTGGCGGGGCGTAACGCCAGGTGTGAAGGCGGCTCCTGACAGCCCGGTATCAGCAGTCACCTTCACCAACCTCGACTATGCTCAGTACTCCTATGCACCACAGGCGAGTCGGGGGCATGGCGTCAGACTCAACACCGATTGCCGAGCAAGGCGTGGCCACCCTGCCCGATAAAGCCTGGGCCCAGGCCCGGCAGCGAACGGACATCATCGGACCACTGGCAGCGCTTGAGGTGGTGGGGCATGAGGCCGTCGACGCCGCCGCTCAAGCGCTGGGCCTGTCCCGGCGACAGGTATATGTCCTGATCCACCGTGCCCGGCAAGGCACTGGCCTTGTGACGGACCTGGCTCCCGGCCAATCCGGCGGCGGGAAAGGCAAGGGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGGCCCGCACGGCCGCGCGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 9343-12579 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZJU01000026.1 Salinicola peritrichatus strain JCM 18795 Salinicola-peritrichatus_contig_26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 9343 32 100.0 33 ................................ CAACGCTGCCCGGCGACTGGTCGAAAACCGGAC 9408 32 100.0 35 ................................ AGCACCGACCCGCGCGTCTATCCCTTCGGGCGGGC 9475 32 100.0 34 ................................ AAGCGGCGGAGACGGTGGAGGAGGCGCGAACCGT 9541 32 100.0 36 ................................ CCTGATTCTGGCCTTGAAGGCCTCGACGTCCTGCAC 9609 32 100.0 36 ................................ CTTGGCTGAGGTGTCGCGCCCGCGCAGCTCCCACAC 9677 32 100.0 35 ................................ TCATGCCTGGTGCGACCTCCTTGGGGATCTGCGTC 9744 32 100.0 35 ................................ TTTGATCTCGTTGCTCCGCGCGATGACGCAGCCAT 9811 32 100.0 36 ................................ CGATGAACGAGGACTGGGAGCCTGAGTGGCGAGCGG 9879 32 100.0 35 ................................ ATCGGCCAGCTGCAGGGCATGGCCGGCACCTTCAA 9946 32 100.0 35 ................................ TCCGGCCAGGTATCGTCCAAGTCCTCGTCCGGATA 10013 32 100.0 35 ................................ GCTCCATCGTGCGCGTGGACCGGTCGACCTGGCGC 10080 32 100.0 37 ................................ GACGAGGAAGACCTCAAGGGCATGACGGCCAACGCCA 10149 32 100.0 36 ................................ TCAAGAGCTACGAGGGTGTCGTGAATCGCGCCATCG 10217 32 100.0 35 ................................ TGATACGCATCGACGACTACGACGCATCAACCGAA 10284 32 100.0 35 ................................ TTTGGGACCTTGGCACAGGGGTGGATACAGGGGTG 10351 32 100.0 34 ................................ CAGCCCCGGCGCTACTGTCCTGCCGTCGTCGCAA 10417 32 100.0 36 ................................ GCGTTCGAGAACTACACCCGCACCGCCCAGGTACTC 10485 32 100.0 35 ................................ TGGGCCGTCGACAAGCCGATGCACCCCAGCCTGGC 10552 32 100.0 35 ................................ CACTGGACCCCGGCGGACATGGACGGCATGACCCT 10619 32 100.0 33 ................................ TTCTACCGGCTTCGTCGTCGAGCTGCTGCTGGG 10684 32 100.0 34 ................................ GCTGATAGAGCGCTGCGAGAAAAGAACGACGCCC 10750 32 100.0 35 ................................ ACCAACAGGCGGTGCGTGAAAGCAACTTGATGGTG 10817 32 100.0 34 ................................ ATTAGCCCAGACATTGAGTCAACTGGAGAGGCTA 10883 32 100.0 36 ................................ AATGACGATCAGTACAAGATATACAGTTTCATTGAC 10951 32 100.0 35 ................................ ATCTGGTGGCGCGAATTCTGGACCACCGACACCCA 11018 32 100.0 35 ................................ AAGCCACTGCAGACAAATTGGATTGGCCGATTCCT 11085 32 100.0 34 ................................ CCCCGCAGCAAGAACGCCCGCAAATTCATCCGCG 11151 32 100.0 37 ................................ GTTGCGTCCGATATAGCGAAAGCGCTCGAGTACCAGA 11220 32 100.0 34 ................................ CCTGCTAATGTATAGCGGGCAATGCCAGTAACGG 11286 32 100.0 33 ................................ ATATGTGCCTTGGATAACAAGCGCCAGCTAGGC 11351 32 100.0 34 ................................ CAATAGAATGTTGGGAAATGCGCCTTGATATAGG 11417 32 100.0 36 ................................ TACGCTCAGACACCGGTCTGAATGAACGAGATCCAT 11485 32 96.9 35 .......................A........ TGTTTGCGGATGCGCCGTTGCTGGCTCTTGCGCAG 11552 32 100.0 34 ................................ AGTGTCTTACCCCCTGTGCCAAGGTCCGTGCCAC 11618 32 100.0 34 ................................ CGCTACGCGTTTAAGTGGGCACCGCCGGTAAACG 11684 32 100.0 34 ................................ GCCGGCCGGGCGCTTTGCCCAGGTCTTTCTCGGG 11750 32 100.0 35 ................................ AAAAACCGCATATCGCGAAGCTGGCGCGCCAGGCC 11817 32 100.0 35 ................................ AACCAGGGCTACCACTACGTGCCCGGGCCGGGGAT 11884 32 100.0 34 ................................ CGGCTCCCGGCGAATCACCGCCAGCAGTTGCCGG 11950 32 100.0 35 ................................ GCTGTCCGGCGTCATCGGTAGTTTCTCTCGTCGTT 12017 32 100.0 34 ................................ CGGCTCAACGTCGAGATCCATATCCCAAATGCTC 12083 32 100.0 35 ................................ CGTTGCAAGGACGGCGTGAACGAGGGATGAGTCAT 12150 32 100.0 36 ................................ GGCTTGCTAACGTGGCCGATGACGCAGCCGGTAACG 12218 32 100.0 33 ................................ ACTGCCGCGATTGCGAAGTCGAAGGAGCGGCCC 12283 32 100.0 35 ................................ TCGAACGCGAACAGCGGATCCTCGCTGCAGGTGCG 12350 32 100.0 34 ................................ ATCGATGTCGACTCGATCACCGCCAAGGATCTGA 12416 32 100.0 34 ................................ TGTAGCGACGTGAGTATCTGTGCATCCAGGACCT 12482 32 100.0 35 ................................ ACCGGGTTCGACACCGCCACGGCCAGCACCCGCAA 12549 31 90.6 0 ..........................-...TG | ========== ====== ====== ====== ================================ ===================================== ================== 49 32 99.7 35 GTCGCGGCCCGCACGGCCGCGCGGATAGAAAC # Left flank : CCTGGCCTGACGGCGGCCCTGGAGTTCCTACGCGACGGGGATGTGCTGGTCGTGTGGCGACTGGATCGACTGGGGCGCTCGCTGCCGCATCTGATCGAGGTCGTCAGCACCTTGGAGGCGCGTGGTGTCGGCTTCCGGTCACTGACCGAAGCCATCGACACCACCACCCCCGGTGGGCGGCTGATCTTCCATGTATTCGGCGCCCTGGGGCAGTTCGAGCGCGACCTGATCCGAGATCGCACCAAGGCAGGGCTCGCCGCTGCCGCCGCCCGTGGGCGTAAAGGAGGTCGCAAGCCCGTCGTCACCGACGACAAGCTGAAGCGGGCCAGGGAGCACCTGGCCAATGGGCTGAACGTCCGCGAGGCCGCCGCACGCCTCAAGGTCAGCAAGACGGCCCTCTACGCCGCCTTGAAGGCCGGCCAGTCCGATGCCCCAGACCACAGTGCAACCGACTCCTGACACTCCGTGCGGTCGCCTTCTGAAAATGACATCGACACCGG # Right flank : GAAGCTTGAACCTTCTAGTTACGACGACAGCGAGTCGCCATCCCATTGCGGTTTGCCATCGTGCATCAGCACGCGATCGCCTTCGGGTTTCTCGTCGAGTTTGGCTTCGTGAACTTCGCCGTCGAAGCGGTAGCGAACGTCGTAACCGACGGTCTCTTCCTTGCTGTCGTTGACCGTGTTGCAGCGCTGCTCGGTGGTGGTGTAGGTATCGCCTTGCTGCATGCGGCCCTGAACCTGATTGCCGGCGATACCGCCACCAACCGCGCCTGCGGCCGTCATGATCTTCTTGCCGCTGCCGCCGCCGAATTGGTTGCCGACCACGCCGCCGACGATCGCGCCGATGGCCGTACCGGCAATGCGATGTTCGTCCTGAACCGGGCGCTGGTGGGTCACGGTGACGTTTTCACAGACCTGTCGAGGTGTCTGGGTCGTCTCGACGATCGGGTCGACGCTGACGATGTCGGCATACTGTGGGGCGTCGTCGCCCGATTGGTAGGCGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGGCCCGCACGGCCGCGCGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //