Array 1 19603-19825 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJIT01000111.1 Bacillus cereus strain B4079 scaffold43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================= ================== 19603 27 96.3 39 .........C................. GCGGACAGCCAAGTAACCATATGAGTAGGAATCTTAGGA 19669 27 100.0 38 ........................... GCGTCCTCTTTTTATATAAAAGGAGGAACCTGGTAGGT 19734 27 100.0 38 ........................... ACTTATTAATAAGTCGGTTAGGACCCTCTATTTAGGGT 19799 27 77.8 0 TT....A.C.............T...A | ========== ====== ====== ====== =========================== ======================================= ================== 4 27 93.5 39 AAAACATAATAATAGATGTATTGAAAT # Left flank : TATACAAGCCAACGATGTAGTGAATGTGGGTGTATCCATAAAAATAATCGGCAAAATCAATCTACCTTTGAATGTCAGCAATGTAGTTTTAAAGTTCATGCAGACTACAATGCTGCCAAAAACATTTCTGTGTACAATATTGAGAAGGTAATACAAAAACAATTGAAGTTACAAGAAAAATTAAATTTAACAAAATATAAAGAACAGTATATAGAGCAGATGGAAAATATTAATTAAATAAGGTAGTAGGTAGTAGTTTGGCGGATTTCCACGCCATAAATGGAGAAGTGATACACGGTAAATTTACCAAGTGTCAACGCCCCGTAAGGTAGTATCGAATGTTAAAAAACATTGATACATAGGCATTCTGAATGCTTTGAAGGATGTAACACAAAGACCGTTACATAATAAATTAATTTGCTGATAAAAAAGCAGGATATTGTTGATATATAAGGGATTGTCGCAATATTTATTGTTAATCATCCATATATTATCGAGAT # Right flank : AAGATAACAAATCATTAAGAAACCCTGGGTGCAGGAGTGTGAATTATTAAATTTTCGGCGGATTTCCACGCCATAAATGGAGAAGTGATACACGGTAAATTTACCAGGTGTATACGCTCCATAAGGTAGTATCGAATGTTAAAAAACATTGATACAAAGGCATCCTGAATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGGATATTGTTGATATACAAGGGATTGTCGCAATATTCGTTATTAATCATCTATCTATTATCGGGGTTAAAACATAACAATAGATGTATTGAAATTGAACTTAAAGATTCTATAGGGGACGATCCTAACGCGTTAAAACATAACAATAGATGTATTGAAATTTCCCTGAGAGAAAGAAATAGGTGTTTATATGAAAGTTAAAACATAACAATAGATGTATTTAAATTGGGGAAATGCTCGGCACTTCACAAAATCATTGCGAAGTTTAAA # Questionable array : NO Score: 5.54 # Score Detail : 1:0, 2:0, 3:3, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAAACATAATAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:85.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 2 20120-20280 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJIT01000111.1 Bacillus cereus strain B4079 scaffold43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 20120 30 100.0 36 .............................. TGAACTTAAAGATTCTATAGGGGACGATCCTAACGC 20186 30 100.0 35 .............................. TTCCCTGAGAGAAAGAAATAGGTGTTTATATGAAA 20251 30 96.7 0 .........................T.... | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 98.9 36 GTTAAAACATAACAATAGATGTATTGAAAT # Left flank : GTATTGAAATGCGGACAGCCAAGTAACCATATGAGTAGGAATCTTAGGAAAAACATAATAATAGATGTATTGAAATGCGTCCTCTTTTTATATAAAAGGAGGAACCTGGTAGGTAAAACATAATAATAGATGTATTGAAATACTTATTAATAAGTCGGTTAGGACCCTCTATTTAGGGTTTAACAAACTAATAGATGTATTTAAAAAGATAACAAATCATTAAGAAACCCTGGGTGCAGGAGTGTGAATTATTAAATTTTCGGCGGATTTCCACGCCATAAATGGAGAAGTGATACACGGTAAATTTACCAGGTGTATACGCTCCATAAGGTAGTATCGAATGTTAAAAAACATTGATACAAAGGCATCCTGAATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGGATATTGTTGATATACAAGGGATTGTCGCAATATTCGTTATTAATCATCTATCTATTATCGGG # Right flank : TTGGGGAAATGCTCGGCACTTCACAAAATCATTGCGAAGTTTAAACAACATGATAGATATTTAGGAGTCTCATTGAACTTTGATTCGATTTGTATATAAATAGAGTAAATGTTATTATATAAGTAATCCAATACTGAAAAAATCATATTGCAAAAGGACACACCTACGCATAACCATAGCGTAGGTGTGTCCTTTTTTTGTTTAAGGAGGAAAAAATTATGGGGAAAACGTTATTTATTGCAGAAAAACCCAAAGTGGCCAATGAAATTATGAAATCGCCACGCTTCCGTCATTCACAAAAGTACATTGGTAGCAAACCTTATTATGGTTATTATGAAAATGATCATTATATTGTTAGTTGGTGCCGTGGGCATCTTCTGGAACTGAAAAATCCAGAAGAGATGGATCCAAAATACAAAATGTTTAGTTTAGAGCACTTACCTTTAATTTATCAGCCAGCTTATAAGGTAAAACAAGAAAATGCTGAACAATTACAAATC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //