Array 1 20648-21975 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CNHE01000056.1 Mycobacterium tuberculosis strain Bir 251, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                              	Insertion/Deletion
==========	======	======	======	================================	=============================================	==================
     20648	    32	 100.0	    45	................................	CATAGAGGGTCGCCGGCTCTGGATCACGCTCCCCTAGTCGTGTCG	
     20725	    32	 100.0	    41	................................	CCGGCAACAATCGCGCCGGCCCGCGCGGATGACTCCGGTCG    	
     20798	    32	 100.0	    42	................................	TTAAAACCGTGTTGCACTGCAACCCGGAATTCTTGCACGTCG   	
     20872	    32	 100.0	    41	................................	GCGTGAAACCGCCCCCAGCCTCGCCGGGGCCGCCTAGGTCG    	
     20945	    32	 100.0	    40	................................	ATTCGCACGAGTTCCCGTCAGCGTCGTAAATCGCCAGTCG     	
     21017	    32	 100.0	    29	................................	CTTGAATAACGCGCAGTGAATTTCGCGGA                	Deletion [21078]
     21078	    32	 100.0	    45	................................	TCCACATCGATTTCCTTGACCTCGCCAGGAGAGAAGATCACGTCG	
     21155	    32	  96.9	    44	.....................A..........	TCGTCGACGATCGCGTCGATGTCGATGTCCCAATCGTCGAGTCG 	
     21231	    32	 100.0	    41	................................	ACCAATGCGTCGTCATTTCCGGCTTCAATTTCAGCCTGTCG    	
     21304	    32	 100.0	    45	................................	CAGGTGAGCAACGGCGGCGGCAACCTGGCGGCCACGGGTCGGTCG	
     21381	    32	 100.0	    41	................................	ACCAATGCGTCGTCATTTCCGGCTTCAATTTCAGCCTGTCG    	
     21454	    32	 100.0	    39	................................	TTTTCTGACCACTTGTGCGGGATTAGCGGGCTTAGGTCG      	
     21525	    32	 100.0	    44	................................	ATGGGATATCTGCTGCCCGCCCGGGGAGATGCTGTCCGAGGTCG 	
     21601	    32	 100.0	    29	................................	CTTGAATAACGCGCAGTGAATTTCGCGGA                	Deletion [21662]
     21662	    32	 100.0	    40	................................	TTCGTCGACCATCATTGCCATTCCCTCTCCCCACGTGTCG     	
     21734	    32	 100.0	    45	................................	TTGCGCCAACCCTTTCGGTGTGATGCGGATGGTCGGCTCGGGTCG	
     21811	    32	 100.0	    29	................................	CTTGAATAACGCGCAGTGAATTTCGCGGA                	Deletion [21872]
     21872	    32	 100.0	    40	................................	ATTCGCACGAGTTCCCGTCAGCGTCGTAAATCGCCAGTCG     	
     21944	    32	 100.0	     0	................................	|                                            	
==========	======	======	======	================================	=============================================	==================
        19	    32	  99.8	    40	TCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                             	       

# Left flank :   GTACGCCCTCGACTTGCAACTGCAAAGCCTCGTGCGTGTTATCGAAGCCGGGCACCCGTCGCGGCTCGTCGATATCGATATCACCTCCGAGCCATCCGGAGCCTAAATGCCCACTCGCAGCCGTGAGGAGTACTTCAATCTCCCGCTCAAAGTGGACGAGTCCAGCGGCACTATAGGCAAGATGTTCGTCCTCGTAATATACGACATCAGCGACAACCGGCGGCGGGCTTCACTTGCGAAGATCCTGGCCGGGTTTGGCTATCGCGTCCAAGAGTCCGCATTCGAAGCGATGCTGACGAAGGGCCAGCTCGCGAAACTAGTTGCACGTATCGACCGCTTCGCCATCGACTGCGACAACATCCGGATCTATAAGATAAGAGGTGTTGCGGCAGTTACGTTCTACGGAAGGGGACGGCTTGTCAGCGCAGAGGAGTTTGTGTTCTTTTGACATCATCAGCAGGCATTGTTACCACACGCTGGACGAATTGTCCATAGAGTCG
# Right flank :  CCGGCAACAATCGCGCCGGCCCGCGCGG

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [12,1] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.70,-6.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [53.3-8.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.01,0   Confidence: HIGH] 

# Array family : NA
//