Array 1 173476-175976 **** Predicted by CRISPRDetect 2.4 *** >NZ_VITR01000001.1 Nitrospirillum amazonense strain BR 11622 Ga0314210_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 173476 32 100.0 33 ................................ CGGCCTGGCCGGGAACCAGATAGCCGGCGGTGT 173541 32 100.0 34 ................................ CCATCCGCCCCGCTGACCCCGCACCTGACCCAGT 173607 32 100.0 34 ................................ AGGTTCGACAGGCCGGAGATCGCTACCGTGGCCG 173673 32 100.0 33 ................................ AAGGGCCTCATCATGTCCGCCCGTTACTCAATC 173738 32 100.0 35 ................................ CGGCCCAGCAGCTTGACAGGTGGAAATTCCAGTAC 173805 32 100.0 35 ................................ ATCATGAAATCCTGGTACACCGCGACGATATCCGA 173872 32 100.0 34 ................................ CGGCGCCGACATCACTCTCTACTGCTGGGGATAA 173938 32 100.0 35 ................................ TTGGGCCTAAAACCGCCTATCACTCGATCCAGGTC 174005 32 100.0 35 ................................ GACCCGGTGCCGCAACGCACCCGGGCTCGACAAAC 174072 32 100.0 35 ................................ GTCGGCACCATCACGAACACGATGGCCAGCCTGGG 174139 32 100.0 34 ................................ TGATGATTGCGGTTCAGCTGAGCTTTCTCGACCT 174205 32 100.0 35 ................................ GATCTAGACGCCCTGATGACCGTGGACGAAAAGGT 174272 32 100.0 35 ................................ TACTACCTGACCATTGATGACCAAGGGAATTGGGA 174339 32 100.0 33 ................................ AGCATGCGCACGTTATGTTTTTGCACCACGTAG 174404 32 100.0 35 ................................ CAGACCCTTGACAGTAATGGCGACGGCCAGATTAG 174471 32 100.0 35 ................................ ATCAACGCAGCCCCCTTGGTGGTGGACACATCACC 174538 32 96.9 35 .............T.................. CATCCACGGGCTAGAATAGCAGCCATAACGCCATC 174605 32 100.0 36 ................................ CTGGCCATCCCCACCGCCGCCGTGCCCCGAAAGCGC 174673 32 100.0 36 ................................ CTGGCCATCCCCACCGCCGCCGTGCCCCGAAAGCGC 174741 32 100.0 35 ................................ GACACCGCCGGGACTGGGAATGTCCTGAAAATCAA 174808 32 100.0 34 ................................ GTCCTGCAGAAGACCCGCGGCACCTCCTACAACT 174874 32 96.9 34 ....................T........... CATGTAGCCGCGATCCCCGCCGTAGTAGGCCCAG 174940 32 100.0 38 ................................ CGGGGCCGCCCCCGCGCTTGCCGCCACCAGGGGCAGGT 175010 32 100.0 35 ................................ TTGACCCAGTCCATGCCGCTTTCGGCCGAGCCGGC 175077 32 100.0 35 ................................ GTCCTGGCCAGCTCCTCGTGGATATCGCCGCTGAT 175144 32 100.0 34 ................................ GAGACCGGCGCCATCGTCGCGGCCGGCCAGGTGC 175210 32 100.0 34 ................................ CAGTAGTTGGCTAAGGCGGTGACGTCGGTTCCAT 175276 32 100.0 33 ................................ ACGCAGTCCGGCACCGTCACGGCGCGTAATGCC 175341 32 100.0 35 ................................ CTCGCCGTCCCAGCGCCAGCCGCCGCCACCCACGC 175408 32 100.0 36 ................................ CGTGAATTCGTTGAAGGTCCGTTGCATGGGGCCCAG 175476 32 100.0 36 ................................ TGCAGCACGAAATTGACACCGCTGGCGTCAGCGGTC 175544 32 100.0 35 ................................ AAGGACACCCTTGCCGAAATCACCGACGTGGCCGC 175611 32 100.0 36 ................................ ATACCGATCATCCGATTGATGGCGGTTCAGGCCGCA 175679 32 100.0 34 ................................ AGTGAAAGGTACGTGGTCGTATTGGTCGCGCTGA 175745 32 87.5 36 .T...........T.G.C.............. CTTACAGGTTCGGCCTTCGGCGCGGGCGAGGTGCTG 175813 32 90.6 34 .T.T...........G................ CATGGGGCAAAAGGGTCTGTTCTGAGCCTCCTAG 175879 31 93.8 35 .T.............-................ GACTTCATCAAGCGGAGCCTGCAGGCGGTCGCCAG 175945 32 90.6 0 .T.............G.....T.......... | ========== ====== ====== ====== ================================ ====================================== ================== 38 32 98.9 35 GCCGCCCTCCGTGCGAGGGCGCGGATTGAAAC # Left flank : CACCCATGTTGATGCTGATCACCTACGACGTGAACACCGAGGATACCGCCGGCCGGCGCCGCCTGCGCCGCGTGGCTCGGGCCTGCCAGGATCATGGGCAGCGTGTGCAGTTCTCCGTCTTCGAATGCGAGGTCGATCCCGGGCAGTGGGTTGCCCTGCGCGCCCGGCTGTTGGCGGAAATCGACCCGGCGACGGACAGCCTGCGCTTTTACCACCTGGGCGCTGACGCCCAGCGGCGTATCGAGCATGTCGGCGCCAAGCCGGCCCAGGACCTGGGCGGCGCCTTGATCTTCTGACGGGGCTCCGACACGTGCGGAGGGTGCGCGAACCGGAAGCACACGCCTGTTTCCCGGGAGGTTCGCGCGACGAATTTTCCAGCCACCGCCGAAGGCTTGGCCTAGAATGCTACCCCCCAGCCCGGGATGACAAACGCCCTATCGGACGAGGTTCGCATAAACCGGGCGGTTTCAAGTTCTTGAACAAGTGCATAAACTGACACA # Right flank : CATGCGCTCTGTCGCCGCAGTCCGAAGCCCCATCGATCCCTGGCTTCGGACTACGGCGGCTAATCGACATCTCAAGATCCAAACGACCCTCTATGGTGGAGCAGCGGGGCATGTGGCGAGTTGGGGGAAGGCACACTTGATCAGCTGTGGCCCATCGCAGCGACGAGTTCCTCGACCACCTGGCCACTAAGGGTTCCATGTCGCTGCAGCAATTCCGCTACCTCGTTGAGGATCGGGCCGAGAGATCGCAACAACTCCAGGACGCTCTTATATTCGCCGGTTACCACGCACTCCACTTGGGTCGCTAGGCCGGAGTCCGCCATCAGGACGCTTGCCAGGGTGGCGCCGCCCCACGCCCTGGCGTCGCCACTCCAGATCAGCTTGTCGCCGAAGCCATGGGCGATGATCATTTCCGCAGCCAAGCCCGTGGCGCGGGCCAGGTCACTGTATGACGGGCCGCCGGACCCCATGCCGATAGACCCCAGAGCCAGCTCCTCCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCCCTCCGTGCGAGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.50,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : NA //