Array 1 52725-49705 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWCA01000008.1 Corynebacterium anserum strain 4HC-13 Contig_8_485.514, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 52724 29 100.0 32 ............................. TTCACCTTGAGGGAGTTAGTCGCGCCCACGGG 52663 29 96.6 33 ............................A CCAGCGACAACAAAAACAATGTCTCGTCCACCA 52601 29 96.6 32 ............................T GAAATGCCACGAACAGCCCGTCAAGAATCACG 52540 29 96.6 33 ............................G GGGTACGCGTTTGCGGCGGCGAAGACGGTAGTG 52478 29 100.0 32 ............................. CGTCAGGTGCGTGAGGTGGAGCGTGAGTCTGC 52417 29 100.0 32 ............................. ATCCAGAGCTCGCAGTTTGCTGGCTCTGCGGA 52356 29 96.6 32 ............................G TAATTGACCAGGCACTCCAACAAACTGTAGAG 52295 29 100.0 32 ............................. ATATGAGGGTTTGAGCTCGGGTTTATCCGCCC 52234 29 100.0 32 ............................. ACCACTGTACCCTTCGCTGTATCGTTGGTGAA 52173 29 96.6 32 ............................G AAAAGCAAAAAATAACTACAAAACAATTATTG 52112 29 100.0 32 ............................. GAGATACCCTCATCCAAAAATGGGGAGAGACA 52051 29 100.0 32 ............................. TCTGCCAAGCCGCCAAAGGCCTCATCCGACAA 51990 29 96.6 32 ............................G TTGTAATTACAAACAAACTTGCAGGTAAATAC 51929 29 100.0 32 ............................. AAATAGAAGGCCAACAAAGACGCCACGCACGA 51868 29 96.6 32 ............................G CATGCCGTCAACCACACGGTAGCGAGCCGACA 51807 29 100.0 32 ............................. CTAGTCGTCGTATCCGCCCACACGACAATACC 51746 29 96.6 32 ............................G CGGTCACCGACGCGCTCGATACCTACATTTCC 51685 29 100.0 32 ............................. CCGTAGGTGACACGGAACTCCCTCCCTGTGTA 51624 29 96.6 32 ............................G AAGGTGCCGACGAATTTCCATGATCTGGAAGC 51563 29 96.6 32 ............................G GGGCTTGTGCCCGTGCGCGGAATCGAACCGCG 51502 29 100.0 32 ............................. ATGCATACCGCATCACTTTGGCTGCGCTATAT 51441 29 96.6 32 ............................T GAGGGGTGTTGCAACCAGTGGTTATCGTTTGC 51380 29 96.6 32 ............................G TGTTCGAATAGGTAACGCTAACCTGGGGAGGG 51319 29 100.0 32 ............................. TCGTCGATGCCAGACCGGGAACTACATGGGCG 51258 29 100.0 32 ............................. GAGCAGACGCGGCACAGCGGGCTAATGAAGTA 51197 29 100.0 32 ............................. CTAGCTGTTGACCGTCCCGTGTAAGGACAATG 51136 29 100.0 32 ............................. TCCTTACCCATCACGTCGATAATGCTTGACTC 51075 29 100.0 32 ............................. GCCGCGAGCAGAATGTTGCCCATATATGTGTG 51014 29 96.6 32 ............................G CACGCCGCAACGGGCAACGCCTCGACGACCAA 50953 29 100.0 32 ............................. CGCTGAAACACATCCAACGCCATCACATCAGG 50892 29 100.0 32 ............................. CGGTCGTGAATACTGGACAGCCGCACAATGCG 50831 29 96.6 32 ............................G TTGCGGTTAGAAAAGCCGGCTTTGCTCCTCGT 50770 29 96.6 32 ............................G GACACCCACAATGACCATAACCTACAGCGACC 50709 29 96.6 32 ................A............ CATCCGAACTGGTGAAACGCCACGGATCACCG 50648 29 100.0 32 ............................. ATTCCTTTGCGGAAAAAGAGGGGAAGAAAATC 50587 29 96.6 32 ............................T TGGGAGCGCCGTAAGCGCGAGAACGGAGGGAA 50526 29 100.0 32 ............................. TGGAGGAGTACATGCCTTCTGTGCAGGTCGCT 50465 29 100.0 32 ............................. TACTGGAGGTCGAAGGCTACTACGCCGACGAC 50404 29 96.6 32 ............................G GTGGTCATGGGGATAGTTATATTCTTTGGCTG 50343 29 100.0 32 ............................. CACAAGCGCCCAGCATTGAGGAAATCGGATCC 50282 29 100.0 32 ............................. GACTCAGATAACGCCCAGCTACGCCACTACCT 50221 29 100.0 32 ............................. TTGTCACTGTTTCTAGCCGAAGTGAAGAGCAA 50160 29 100.0 32 ............................. AACAAAGACAAAAACTCAAGCAACATCCAGAG 50099 29 100.0 32 ............................. ACGTGAACTACAGGGAGTACTTGACAGACTCA 50038 29 96.6 32 ............................G GCTTCACCGCACCTAAACGGCAACCCAATTTC 49977 29 100.0 32 ............................. GCACCCAACCTCACCAAAGCCCACCCACACGA 49916 29 96.6 32 ............................T AAGAAGATGTCCACTTTCTAAATAAGGGGGTG 49855 29 96.6 32 ............................G AGCTTCTTGAGCGGATGAACTCTGCAGCAATG 49794 29 100.0 32 ............................. TCGCAGAAAACAAACAACAAAACCCCAGGCAG 49733 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 50 29 98.6 32 GTGTTCCCCGCGCAGGCGGGGATGAGCCC # Left flank : GAAGTCATCGCGGCAGGTATTAACTGGGCAGATGAAAGCGGTGTGCCCTGATGATGGTTCTGACAGTCACCGCAGTTCCAGCCGGTTTACGCGGTGATCTGACCAAGTGGTTGATGGAAATTGCCCCGGGTGTTTTTGTAGGAGACCCCAGCGCCAGGATTCGAGATTTGCTGTGGGAAAGGACGATTGGCCTTTGTAAAGATGGCCGTGCTCTGTTGATCTATTCGTCAGATAACGAGCAGGGGATGGAGTTTCGCACTCACCGACATAACTGGGAACCGACCGATTTTGACGGGATTACTCTGATGATGCGTCCCAGTGAAAAGAACGCATATCAAAAGTACCCCCGCCGTACGGGATGGTCTACAGCACGAAACGCACGTAGGCGTCGTTAGGGAACGCTAGCAAAGGGTTGTCTCGGATTGAGACTCGTGCGAAGCGGTGGGAAGAAGTCGTATGTAAAATGACAATGGCTCTACTAAAACTGCTGATCCGCAAGT # Right flank : TCACACACATAAGAAACCAACCTTGCCATAATTTGTTCACACGGAGGGGGCAACCGGATGTGAGAAGGTGCTGGTTGCGTGGCTGGTTTATAGGGGGCTTGTGGAACAGATGTAGAGAAACTTCTTAGGCGGATCGAGGCAACAGTAGGGCTCTAGCGGTTGATTGTTGTTGATAAGGGCAATGGAGTAAGTGGCGGATAGTATCGGGTGCTCTAGGGGATTTTTATGGCCGTTGATCAGGCGAAAAAGAAAAAGTTGAGTGAATTGGGAACAACTTTGAACTGTTGCGAGTTGTATAGGTTGTCAAAGAGTTGAGTTGGTGAGACTCAAGATGACTTGACGTTAGAGAAAAAATGCGGATACTAGTCATCATGAGTTGAGTCGCTTTCACTAAAGACTCGAAATAACGAACCGACACAGGAGGAAAACAACATGGGACGCGCAGTAGGCATTGACCTTGGAACCACCAACTCTGTGGTCTCCGTATTGGAAGGCGGCGA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCAGGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCAGGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //