Array 1 220488-217520 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZHE010000043.1 Shewanella algae strain 6F5 6F5_43, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 220487 28 100.0 32 ............................ ATATCATTTTAGCGCGGTGGGCAAGAGGTGAG 220427 28 100.0 32 ............................ CCGTTCGAGCTCTGCGCGAGCAGGCTGATATT 220367 28 100.0 32 ............................ AATGGAAGTGGCCAAGCGCGCATTCCAGTCAA 220307 28 100.0 32 ............................ AACAGGTAAAGGCAACCTTAGCGCATCGGCAA 220247 28 100.0 32 ............................ CCCAAGGCCGGGCCGTGTCACTTTGAGAGGGA 220187 28 100.0 32 ............................ ATTCAAGCCCGTTCAATGATGTTTTTGGCGGC 220127 28 100.0 32 ............................ AGACGGGCTGACCGTGGGCGGCTGGCTCGACC 220067 28 100.0 32 ............................ TAAAGTCAATAACTATTTTCTGCGGAGCAAAT 220007 28 100.0 32 ............................ ATACCTGATTCAAAGCCGTGGCGTGAATACAG 219947 28 100.0 32 ............................ TTGCCTGTGGCCATGTGTGTTACCCCGTTTGT 219887 28 100.0 32 ............................ AGTAAGCCTTCGTTTGGCAGAATGAATTCCTG 219827 28 100.0 32 ............................ ACCACGGCACGGGGAGCCGTGTTGATGCTGAT 219767 28 100.0 32 ............................ TCGGCCACCCAGGCATTGAGTTTTTGGCCATT 219707 28 100.0 32 ............................ ACGTTCATGAGTTGCAGCAGTAGCTGGTAGAT 219647 28 100.0 32 ............................ GCTCGCTTTACGCCCCCACAGTTCAGCTTGCT 219587 28 100.0 32 ............................ TGAATGCTTTTCTTATGTCGTCATAGTTAACC 219527 28 100.0 32 ............................ TGTAGACTTTTTACCGAATGAATAATGAATAT 219467 28 100.0 32 ............................ CCTTGGGTCGCCAGAGTCCACATACTTTAACA 219407 28 100.0 32 ............................ CGGCCGTAACCGGTGAGGATCTATTCCCAACA 219347 28 100.0 32 ............................ TGAAAGACGGTACCGCATCAGCCTATGATCAA 219287 28 100.0 32 ............................ TATTGCCACTTTTGCCCCTTTGATGGTGGCTC 219227 28 100.0 32 ............................ TTTAACAACATAAGTTCCTGTTGATGTGGTAA 219167 28 100.0 32 ............................ TAAAAGAGAGGTCAGAGCATGAATATGCAAGG 219107 28 100.0 32 ............................ TTCAAAGCTTTGCACCTCATTGGCGCGATCAA 219047 28 100.0 32 ............................ GCGCTGCAAATCAGTCTTAGTGCAAGCTAATA 218987 28 100.0 32 ............................ GTATCGAGGTCGCCGGTGAGGTTAATCCGGCA 218927 28 100.0 32 ............................ TGATTATGAAATGGTTGATGGGGTTTATCATT 218867 28 100.0 32 ............................ TTCAAAGCTTTGCACCTCATTGGCGCGATCAA 218807 28 100.0 32 ............................ TGATTATGAAATGGTTGATGGGGTTTATCATT 218747 28 100.0 32 ............................ TTCACGAAGAACTGCCGGAGGAGCTTAAATGC 218687 28 100.0 32 ............................ TTTTGGACGACCGGCACCCTTTCTTGCTCCAC 218627 28 96.4 32 ..................T......... TTTATCCAAGCGTTCAGAGCGGATGGCTGAAT 218567 28 100.0 32 ............................ GGCATGGAAATGAACGGCGGCAAAACGGTCGC 218507 28 100.0 32 ............................ TGTTCAGAGCGCAGCCAGTTTACCCGGTCCAC 218447 28 100.0 32 ............................ GACAACGGCACCCTGCACCGGCAGTTTGATGA 218387 28 100.0 32 ............................ ATCATCTACCATCACATCGCAATACTGAGCAA 218327 28 100.0 32 ............................ AGGATGACAAATTGATAGCAGGAGTTAATTAT 218267 28 100.0 32 ............................ ACTCAAACAGCAAAGCTTGAGCAGGATTATCA 218207 28 100.0 32 ............................ AACGGCTGGAAGAATTACAAGACCAGAAACAG 218147 28 100.0 32 ............................ TGAGCACCAGGAAGCCCTAAAGAAAACCAAAG 218087 28 100.0 32 ............................ CTTGCAAGGCTTTTACGCCCATCTTCCCTAAA 218027 28 100.0 32 ............................ TACATGCGAAGACAGCCATTGTGCATCTTCGG 217967 28 100.0 32 ............................ GTTCTGCATTGCGTTTTACCGCTGCTTCGTTT 217907 28 100.0 32 ............................ ATCACGGTTAGGCTGTTCGTCTCCTGGACGAA 217847 28 100.0 32 ............................ TGATTATGAAATGGTTGATGGGGTTTATCATT 217787 28 100.0 32 ............................ TGCAGAGAATGAGCGCTCAACCGCCTCATAAG 217727 28 100.0 32 ............................ TTCACGAAGAACTGCCGGAGGAGCTTAAATGC 217667 28 100.0 32 ............................ AGACTGGCAAGCGAAGAAGGTTTGAGTGAAAA 217607 28 100.0 32 ............................ AGGATGACAAATTGATAGCAGGAGTTAATTAT 217547 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 50 28 99.9 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCTTTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGTATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAATATCCGAATTTCCTGCATTTATGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGACAGTTGGAAGCGTCCTGCTCTGGGCGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGGGAACGGATAAGCGGGGCCGAGTAGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAGACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGATGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //