Array 1 50047-57398 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKWB01000003.1 Acinetobacter junii strain TUM15499 sequence003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 50047 30 93.3 30 ............................GC ACTTCTTGCACTGATATAGAAATTGTGTCA 50107 30 93.3 30 ............................AA GTCCAAGCGTCAGAGATTGAATTTGTTGCA 50167 30 96.7 30 .............................G AGAACTTTAGCGACTTGGGAAACGTTCGGA 50227 30 93.3 30 ............................AA TTGATATTTTGTTGATCATCAAAGTAATTT 50287 30 93.3 30 ............................AA CAACCGTCAGTTCTAAAAGCAGGCGGACGA 50347 30 96.7 30 .............................A TAAACCAAAGCTCGGGAGACTTACAGCCGT 50407 30 96.7 30 ............................A. TCGCAACTATCTACGAATTTGAACGATGGC 50467 30 96.7 30 ............................A. AAGCTGCTTTTGATGTGCCCTTTTCCATTG 50527 30 93.3 30 ............................AA GAGCATAACACTTACGAGTATTGTGCAATT 50587 30 96.7 30 .............................G CTGCTTCTACCGCTTGTTTTGCAAGTCGTA 50647 30 93.3 30 ............................AA TAAGCTTGTGTATGGATGAGCAACGGAATA 50707 30 100.0 30 .............................. GAGAAAACATACAAGCTTCACGTTTCCATC 50767 30 100.0 30 .............................. GTTGCCCTTGATGAGTTGTCATATATCCCA 50827 30 96.7 30 ............................A. TCACCCCTCCGTATCCGCTTTTGGTTCTAA 50887 30 93.3 30 ............................AA CAGCCAATTCCTTGAAAGTCACGCCCTCAG 50947 30 96.7 30 .............................A GACCCAAGAGAATACTGCTCAATAATTCTT 51007 30 96.7 30 .............................A CACCACCACCTAGAAAATAGTAAGGTTGAA 51067 30 93.3 30 ............................AA CTGCTGCGGTCGGTGCTGTAATCACCACTA 51127 30 93.3 30 ............................AC GTGTGGTTTTTGAATCCTTAAGCATCTGCA 51187 30 96.7 30 .............................G CACGATTGACCTTGTACGAATACAGACGAA 51247 30 93.3 30 ............................GA ATGAACATTGAACGTCAAAAAAAAGATGCG 51307 30 93.3 30 ............................AC ATACTCACCTTGTTGCATTTTCTTTCACCA 51367 30 96.7 30 ............................A. CATCGGCGATATGACCGAACATGTTTTACT 51427 30 93.3 30 ............................GA AATCAACGAACGGTGACTAAACGATTATTT 51487 30 96.7 30 .............................A TAACCATCAATGTATACAGGCACATCCTCA 51547 30 96.7 30 .............................C TGGAGTTGTTCCAACTGCCGCCGTGTTAGG 51607 30 96.7 31 .............................G AGTGCGAAGACGATTCTAGCCGCTTCATGCA 51668 30 93.3 30 ............................GA ATGAGGTGAGCATGTTTAAGGAATTCTTTG 51728 30 96.7 30 .............................G AACAAATTAAAACGGCGCTGCAGGAGCTTC 51788 30 96.7 30 .............................A CGAGGAAATTTTATGAAACAAGCGCCTAAA 51848 30 100.0 30 .............................. ACGACAGCATGATTTTTAATAGAGCTGCTT 51908 30 96.7 30 ............................G. ATGCAATGACCGCAGCCTGACGGCCAATGA 51968 30 93.3 30 ............................AA TCGGAAGTCTCGGCGCTGCAACGGTTGATA 52028 30 100.0 30 .............................. GTTGGTGAGCCTACGGCCATACGATGCGAT 52088 30 96.7 30 ............................G. CGAGATCATTGGTCGGGCTGGAAAGCAGCC 52148 30 100.0 30 .............................. GTTGGTGAGCCTACGGCCATACGATGCGAT 52208 30 96.7 30 ............................G. CGAGATCATTGGTCGGGCTGGAAAGCAGCC 52268 30 100.0 30 .............................. GTTGGTGAGCCTACGGCCATACGATGCGAT 52328 30 96.7 30 ............................G. CGAGATCATTGGTCGGGCTGGAAAGCAGCC 52388 30 96.7 30 ............................A. GCGGTAGTTCTTGTCATCCCACCACGGATA 52448 30 96.7 30 ............................G. GTAGCTTTGAGCAATGCGAATGCACCGCTC 52508 30 96.7 30 .............................G TATAGATTGCGCTGTTTGCGCCATGTTCAA 52568 30 93.3 30 ............................AC ATAAAGGCGCAATACAAATTCTTGCTGACG 52628 30 96.7 30 ............................A. ACTGTGACAACTGCTCTTCGCGGTGTAATT 52688 30 93.3 30 ............................AC ATTAGCGGAGTAACAATATTAATCCAATTA 52748 30 93.3 30 ............................GA TACAAAGCCTGACTCATGCAGCATTGTATC 52808 30 93.3 30 ............................AA ACAGCGGCAATAACGGCGCTTTCACGTTCC 52868 30 100.0 30 .............................. ACTGCCATCTATTCAGGTCAAAAAACTCAA 52928 30 100.0 30 .............................. GAGCACGTAATACGTTAGCGTGATTCATAT 52988 30 96.7 30 .............................G TAAAGTTGAAACGTCTGCTTGCGCAGAAAC 53048 30 96.7 30 .............................C AAAAAACACCCGACTATATCAATGATAAAA 53108 30 96.7 30 ............................A. GGTCAGTATCAGTTTTCTATAATTGGGTTT 53168 30 96.7 30 .............................C GCTTCTTCTCAAAGTGCGGCTTAGTGAGAT 53228 30 93.3 30 ............................GA GCACCCAATTCACGCTCGATGAAATGACGT 53288 30 93.3 30 ............................AA CAACAGCAGTTTGTACGCCTGCTAGTTCTT 53348 30 93.3 30 ............................AA TAATGGGACTCCCCAACATAACCATTTGCG 53408 30 93.3 30 ............................CG ATGGTAATATACTCGTAATTCTGTATATAC 53468 30 93.3 30 ............................AG TTAGTTAATGTCGTGGGGAAATTGACAACA 53528 30 93.3 30 ............................AA ATAGCGATCCCAGCAGTAAAGCCAAGCCAA 53588 30 96.7 30 .............................G ATACTGAAACCAATCAAGTAACCGATTTAC 53648 30 93.3 30 ............................AC CGAGAGTCCAACCGCCTAGTGTTGTTGTAG 53708 30 93.3 30 ............................AC CTCTTAGAACTTTTGCTACTTGGCTGACGT 53768 30 93.3 30 ............................CA ATCAACAGTGCCTAGCAATTGCTCTACTGC 53828 30 93.3 30 ............................GA CGACATCACAGATACTTCTGTATCTTTCTC 53888 30 93.3 30 ............................AG AGACTTCATTTGTGTATTCAATGACTTCTT 53948 30 96.7 30 ............................G. CTACAAAAATATGTCAATCGTGGTGCTGTT 54008 30 100.0 30 .............................. AAGGCTGCCCCAGTTGATGGCTCTCTATGT 54068 30 96.7 30 .............................A CGGTTGGTGCTGTCTCGAAAGTTCTTGCGC 54128 30 96.7 30 .............................G AGTATTGCGACAACGATGGAAAAATGTCAC 54188 30 96.7 31 .............................G ACAGGGAATACAAGGGTGATGATTTTGAAAT 54249 30 96.7 30 ............................A. AGACCAGACACAGACACATCACTATTTACA 54309 30 96.7 30 .............................G CTAACAATCAAATTGTCTATAAAACATCAT 54369 30 93.3 30 ............................AA TAGTTCTCTAATTTCTTGTTGTGAATAATA 54429 30 96.7 30 ............................G. ATCTGCTGCGCTTATGAGCAATGCCAATGC 54489 30 96.7 30 .............................G TAGAAGTAACTCCAGTAGAACGCAATATCT 54549 30 96.7 30 ............................G. GAGTTGTTAGGTCGACAATCATGGGATTCT 54609 30 96.7 30 .............................A ACAGCCAACCACAGCCCGAAAAAATTACTA 54669 30 93.3 30 ............................AG GGTTTTTATCCCTGGTTCCAGGTCTCTTAC 54729 30 93.3 30 ............................AA TTGATCTACAGCATCGAGTTTATTTTTAAC 54789 30 96.7 30 .............................A CCGAAGATAAATACCAAGTTGTTGTTTATC 54849 30 96.7 30 ............................C. GTGTTGTACATCGTTGCGAGAAATATTAAA 54909 30 96.7 30 .............................C ATTAACGGCCAAGCGTGGACACGAGAGCAG 54969 30 96.7 30 .............................C CTCCGCCACTTGGATGCGCGACATTTTATT 55029 30 93.3 30 ............................AG TGAGAGTTTCTTTTCTTGATCTTGTTCAGT 55089 30 96.7 30 ............................A. AAAAGCCCCGATTAATTGGAAAGGGGGCGA 55149 30 100.0 30 .............................. ATCAAGGACGCCTTAAGAAGTATTGCTCAT 55209 30 100.0 30 .............................. TGCTAGCTACACCCTTATTGATTAGATCAA 55269 30 96.7 30 ............................A. GATGTATACAATGTTACGCGCATCTGAGAT 55329 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 55389 30 96.7 30 ............................A. CGAGCAATTGAACCTAGCATTTCCTCTGTA 55449 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 55509 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 55569 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 55629 30 100.0 30 .............................. GCACTGCAGAACGAGTTAAAAAGTTCATCG 55689 30 96.7 30 ............................A. AGAGAGCATCATTTGAAGTGATTAGATCAT 55749 30 100.0 30 .............................. TAAGGATTAAAACTGATTCAGGCTATCTAT 55809 30 96.7 30 .............................C TATGCGGAACAATATGATCGACTACGTTAG 55869 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 55929 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 55989 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 56049 30 100.0 30 .............................. GCACTGCAGAACGAGTTAAAAAGTTCATCG 56109 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 56169 30 96.7 30 .............................A TATTTGAGAAAGGGCCATTTAGCACTTAAT 56229 30 100.0 30 .............................. TAGGAATCCACCACATGACATGGTAATGAG 56289 30 93.3 30 ............................AA GAAGGAGCGAGAAGCCAAATTTTAGCTACA 56349 30 93.3 30 ............................AG TAGGGCGAGAGTAAGACAAATAATTCTGCA 56409 30 96.7 30 .............................A CTTGAAATAATTTGTTTTTTGCTTGGTGGT 56469 30 96.7 30 .............................G CTCAGCAGATAAGTAGCCTGTTTGTTGTGT 56529 30 96.7 30 .............................G CAATTCATTTACAGTTCTCGCCATAACAAT 56589 30 93.3 30 ............................GA TAAGTTTTAATTTGTGCGCCGATGCCACAC 56649 30 96.7 30 ............................A. CAATCACACAATCTTCATCCGAACCAAGAA 56709 30 93.3 30 ............................AC GCAAGCGAGTTGCTTCTAAACGAGCATCTT 56769 30 96.7 30 ............................A. CGTCATAAGCATTTAATCGAATACCCTCAA 56829 30 96.7 30 ............................A. CTAGTGTTATTGGGTGGGTAAAACGATTTA 56889 30 96.7 30 .............................G TTTGACCTGAATCCAAAACCAAATTAAAAG 56949 30 96.7 30 ............................G. ACAGGCTAATGTTAAGCCATGTCGGGTGGG 57009 30 96.7 30 ............................A. TCGGGGGTGATGTGAGTAAGCAAAACGATA 57069 30 100.0 30 .............................. CACCCCGACTTTGTAATTTCCTCCGACATT 57129 30 96.7 30 .............................G ATTCAACGGGTGGCAAAAATAAAGCTGAAT 57189 30 100.0 30 .............................. ACAGCGCAGGGATGTGCTGCGGGTATAGTA 57249 30 93.3 30 ............................AG CAATTCATGGTATGGGTTTTATTAGCGAAT 57309 30 93.3 30 .............C..............A. AAAGCAATATTGACCAATAAAAGTAAGCGT 57369 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== =============================== ================== 123 30 96.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GTAAATGGCTAGAACGATTCATTGATTATGTTCATATCATTCAACCGAGAGAAGTACCTCAAGCTAAAGTTACTGGTCATGCACACTATTATCGAGTCAATCCAAAGATGAGTGTTGAAGAGCGTATAGTTCATCAAGCGCAACGTCGAAATATTTCTTTGGATGAGGCTACGCAGCATTTTAAACAATATATTGAAAAACCTATTATTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCAAAACGAGATCAAAATATAGATCGACCATATCGTTTATATATTGGTAAATCTCTAGTTGATGAGGCAAAAGATGGAGAGTTTGGAACGTATGGACTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTACTATTTAACAGCTTAATAAAATCAATAAGTTACATCAAGTCGTTTTTTGATTGGGTAAATTGCTAAAAAACCATCATAAATACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : ACATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCTTGATTGGCATTTGTTCTGTGTGTTCATTACGGAATTTATTTTAAGAATTAATAAGTGACTTATAATTCTTGTTCCAAAATTATCGTGTTATATGTCATTTAAAATACATAACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACTAACGTTTTTTTAGTGAAATTTTCATGCGTGGTTTATACCTCATCACCAATGATGATCCCATTCAACTTCTTTTAGAAAAGTTAGAGGCTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAGTCCTTTGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGAT # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //